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544
datasets available to search
ShareScore release 0.7.1
Dataset results
544 results for “integrated models”
Integrated single-cell sequencing reveals principles of epigenetic regulation of human gastrulation and germ cell development in a 3D organoid model
GEO Series GSE181724. Homo sapiens. 23 samples. Type: Expression profiling by high throughput sequencing.
Novel non-integrating DNA Nano-S/MAR vectors restore gene function in patient-derived pancreatic tumour models II
GEO Series GSE142117. Homo sapiens. 9 samples. Type: Expression profiling by array.
Enhancing reservoir water level time series in the Mekong river basin by improving area-elevation models and integrating multi-source satellite data
<p>This is a reservoir water surface area and water levels dataset including 32 major reservoirs in Mekong River basin. For all the 32 reservoirs, water levels were inverted by using improved DEM-derived A-E model (combined with actual reservoir parameters limitation), improved DEM-derived A-E model (combined with actual reservoir parameters limitation) or satellite-derived A-E model based on the Landsat-derived surface area. An initial time series was constructed based on the optimal improved A-E model according to their own altimetry data availability. Then all the altimetry water levels (if available) were merged into the initial time series to construct the final time series water levels.Altimetry water level was preferred when the date of two datasets was identical.</p>
Database of the integrated model, used for the material and climate implication of car transition in China
<p>Database of the integrated model, used for the material and climate implication of China car transition. All excel files are the parameter settings used in that case. All csv files are results under all scenarios.</p>
PriOmics: integration of high_throughput proteomic data with complementary omics layers using mixed graphical modeling with group priors
GEO Series GSE253910. Homo sapiens. 360 samples. Type: Expression profiling by high throughput sequencing.
Integrative Analysis of Tamoxifen-resistant Cell Line Models Based on Sequencing Genomes, Transcriptomes and Epigenomes [aCGH]
GEO Series GSE55380. Homo sapiens. 4 samples. Type: Genome variation profiling by array.
Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model
GEO Series GSE280737. Sus scrofa. 16 samples. Type: Expression profiling by high throughput sequencing; Other.
Integrative genomic strategies applied to a lymphoblast cell line model reveal specific transcriptomic signatures associated with clozapine response [methylation]
GEO Series GSE158716. Homo sapiens. 92 samples. Type: Methylation profiling by array.
Model integration of circadian and sleep-wake driven contributions to rhythmic gene expression reveals novel regulatory principles
GEO Series GSE262410. Mus musculus. 124 samples. Type: Expression profiling by high throughput sequencing.
Integrated Genomic Analysis of a Stem Cell Model of Overgrowth Syndrome with Intellectual Disability (WGBS)
GEO Series GSE116420. Mus musculus. 13 samples. Type: Methylation profiling by high throughput sequencing.
Investigational eIF2B activator DNL343 modulates the Integrated Stress Response in Preclinical Models of TDP-43 Pathology.
GEO Series GSE281960. Homo sapiens. 70 samples. Type: Expression profiling by high throughput sequencing.
Exchange of molecular and cellular information: a hybrid model that integrates stem cell divisions and key regulatory interactions [an3]
GEO Series GSE155462. Arabidopsis thaliana. 6 samples. Type: Expression profiling by high throughput sequencing.
Exchange of molecular and cellular information: a hybrid model that integrates stem cell divisions and key regulatory interactions [w5C6]
GEO Series GSE155463. Arabidopsis thaliana. 16 samples. Type: Expression profiling by high throughput sequencing.
In vitro to in vivo extrapolation modeling to facilitate the integration of transcriptomics data into genotoxicity assessment
GEO Series GSE281641. Homo sapiens. 161 samples. Type: Expression profiling by high throughput sequencing; Other.
Integrative genomic strategies applied to a lymphoblast cell line model reveal specific transcriptomic signatures associated with clozapine response
GEO Series GSE158821. Homo sapiens. 120 samples. Type: Expression profiling by array; Methylation profiling by array.
Data set and 3d model from Emendi M, Sturla F, Ghosh RP, Bianchi M, Piatti F, Pluchinotta FR, Giese D, Lombardi M, Redaelli A, Bluestein D. Patient-Specific Bicuspid Aortic Valve Biomechanics: A Magnetic Resonance Imaging Integrated Fluid-Structure Interaction Approach. Ann Biomed Eng. 2020 Aug 17. doi: 10.1007/s10439-020-02571-4. Epub ahead of print. PMID: 32804291.
<p>Data set and 3d model from Emendi M, Sturla F, Ghosh RP, Bianchi M, Piatti F, Pluchinotta FR, Giese D, Lombardi M, Redaelli A, Bluestein D. Patient-Specific Bicuspid Aortic Valve Biomechanics: A Magnetic Resonance Imaging Integrated Fluid-Structure Interaction Approach. Ann Biomed Eng. 2020 Aug 17. doi: 10.1007/s10439-020-02571-4. Epub ahead of print. PMID: 32804291.</p> <p> </p> <p>This is the abstract:</p> <p>Congenital bicuspid aortic valve (BAV) consists of two fused cusps and represents a major risk factor for calcific valvular stenosis. Herein, a fully coupled fluid-structure interaction (FSI) BAV model was developed from patient-specific magnetic resonance imaging (MRI) and compared against in vivo 4-dimensional flow MRI (4D Flow). FSI simulation compared well with 4D Flow, confirming direction and magnitude of the flow jet impinging onto the aortic wall as well as location and extension of secondary flows and vortices developing at systole: the systolic flow jet originating from an elliptical 1.6 cm<sup>2</sup> orifice reached a peak velocity of 252.2 cm/s, 0.6% lower than 4D Flow, progressively impinging on the ascending aorta convexity. The FSI model predicted a peak flow rate of 22.4 L/min, 6.7% higher than 4D Flow, and provided BAV leaflets mechanical and flow-induced shear stresses, not directly attainable from MRI. At systole, the ventricular side of the non-fused leaflet revealed the highest wall shear stress (WSS) average magnitude, up to 14.6 Pa along the free margin, with WSS progressively decreasing towards the belly. During diastole, the aortic side of the fused leaflet exhibited the highest diastolic maximum principal stress, up to 322 kPa within the attachment region. Systematic comparison with ground-truth non-invasive MRI can improve the computational model ability to reproduce native BAV hemodynamics and biomechanical response more realistically, and shed light on their role in BAV patients' risk for developing complications; this approach may further contribute to the validation of advanced FSI simulations designed to assess BAV biomechanics.</p> <p> </p>
Integrated N-mixture models generally perform well against other models for false positive prone data in ecological applications
Open the record for dataset details and reuse information.
The Impact of the Digital Economy on the Integration of Rural Tertiary Industries: A Study Based on Dual Mediation and Dual Threshold Models
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The false positive problem: An assessment of integrated abundance and occupancy models where false positives are present in ecological data.
Open the record for dataset details and reuse information.
A NOVEL AND INTEGRATED APPROACH TO INCREASE MULTIPLE AND COMBINED STRESS TOLERANCE IN PLANTS USING TOMATO AS A MODEL
<p>This will be a screening experiment aiming a first evaluation of the five PGPR that have been isolated in AUA, Laboratory go General & Agricultural Microbiology in a previous research project. To minimize interference of the treatments with soil fertility and soil heterogeneity, this first experiment will be conducted in a soilless cultivation system</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.