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Figure 1 in Tracking of spatial changes in the structure of the zooplankton community according to multiple abiotic factors along a hypersaline lagoon
Figure 1. Map of the coast of the state of Rio de Janeiro pointing out the 8 sampling stations of the Araruama lagoon.
Figure 4 in Tracking of spatial changes in the structure of the zooplankton community according to multiple abiotic factors along a hypersaline lagoon
Figure 4. Temporal correlations between larvae of Cirripedia and Acartia tonsa (A) and between Acartia tonsa and temperature (B).
Figure 3 in Tracking of spatial changes in the structure of the zooplankton community according to multiple abiotic factors along a hypersaline lagoon
Figure 3. Relationship between temperature, salinity, and pH and their effect on the abundance of Cirripedia larvae over the months.
Figure 5 in Tracking of spatial changes in the structure of the zooplankton community according to multiple abiotic factors along a hypersaline lagoon
Figure 5. Variation of zooplankton density in each collection station, variations in the index of Shannon-Weaver which measures the Diversity (H) and the Pielou's uniformity which measures the Equitability (J) over the sampled months.
Fig. 3 in Helminth communities of two populations of Myotis chiloensis (Chiroptera: Vespertilionidae) from Argentinean Patagonia
Fig. 3. Intestinal location of the endoparasites of Myotis chiloensis, represented by the number of helminths found infecting each intestinal region from the bats from a. Manso, b. Luis Ruiz.
Fig. 2 in Helminth communities of two populations of Myotis chiloensis (Chiroptera: Vespertilionidae) from Argentinean Patagonia
Fig. 2. Endoparasites of Myotis chiloensis. a. Ochoterenatrema sp. (ventral view), b. Paralecithodendrium sp. (ventral view), c. Parabascus limatulus (ventral view), d. Parabascus sp. (dorsal view), e. Postorchigenes cf. joannae (dorsal view), f. Vampirolepis sp. 1 (scolex), g. Vampirolepis sp. 2 (scolex), h. Allintoshius baudi (male's bursa), i. Physocephalus sp. (encysted larvae), j. Physaloptera sp. (anterior region). Scale bar = 100 μm.
BTyperDB: a community-curated, global atlas of Bacillus cereus sensu lato genomes for epidemiological surveillance
<p>The ability to cause foodborne illness, anthrax, and other infections has been attributed to numerous lineages within <em>Bacillus cereus sensu lato</em> (<em>s.l.</em>). However, existing pathogen surveillance databases facilitate dangerous pathogen misidentifications when applied to <em>B. cereus s.l.</em>, potentially hindering outbreak or bioterrorism attack response efforts. To address this, we developed BTyperDB (<a href="http://www.btyper.app/">www.btyper.app</a>), an atlas of <em>B. cereus s.l.</em> genomes with standardized, community-curated metadata. BTyperDB aggregates all publicly available <em>B. cereus s.l.</em> genomes (including >2,600 previously unassembled genomes) with novel genomes donated by laboratories around the world, nearly doubling the number of publicly available <em>B. cereus s.l.</em> genomes. To showcase its utility for pathogen surveillance, we use BTyperDB to identify emerging anthrax toxin- and capsule-harboring lineages. Overall, our study provides insight into the epidemiology of an under-studied group of emerging pathogens and highlights the benefits of inclusive, community-driven metadata FAIRification efforts.</p>
Figure 4 in Impact of five different species of bamboo plantations on earthworm communities in West Tripura (India)
Figure 4. Rank abundance curves showing abundance patterns of earthworm species in soils under different species of bamboo plantations.
Figure 3 in Impact of five different species of bamboo plantations on earthworm communities in West Tripura (India)
Figure 3. Bray-Curtis single cluster analysis based on earthworm community composition in the different bamboo plantations.
Figure 1 in Impact of five different species of bamboo plantations on earthworm communities in West Tripura (India)
Figure 1. Photographs of different earthworm species under bamboo plantations of West Tripura- (a) Eutyphoeus comillahnus (b) Amynthus alexandri (c) Metaphire posthuma (d) Eutyphoeus gigas (e) Drawida nepalensis (f) Drawida papillifer papillifer (g) Drawida assamensis (h) Perionyx excavatus (i) Kanchuria sp1 (j) Lampito mauritii (k) Metaphire houlleti (l) Dicogaster bolaui (m) Eutyphoeus gammiei (n) Pontoscolex corethrurus (o) Octochaetona beatrix (p) Lennogaster chittagongensis (q) Eutyphoeus orientalis (r) Lennogaster chittagongensis.
Figure 2 in Impact of five different species of bamboo plantations on earthworm communities in West Tripura (India)
Figure 2. Bar diagram showing earthworm biomasses (g m-2) and densities (No m-2) of anecic and endogeic ecological categories under soils of different bamboo plantations.
Figure 3 in Diversity and community structure of oribatid mites (Acari: Oribatida) in the dominant habitats of Machakhela National Park (Georgia, Caucasus)
Figure 3. The results of the cluster analysis of the different forest habitats in Machakhela National Park.
Figure 1 in Diversity and community structure of oribatid mites (Acari: Oribatida) in the dominant habitats of Machakhela National Park (Georgia, Caucasus)
Figure 1. Distribution of the sites of the sample collection of the oribatid mite diversity in the Machakhela National Park.
Data and code for: Behavioral plasticity shapes participation in a mixed-species flocking community of birds
<p>Behavioral plasticity can modulate the costs and benefits of sociality, and thus may play a prominent role in mediating competition and facilitation during social interactions in mixed-species groups. However, investigations of assembly patterns of mixed-species groups typically treat species' behavioral attributes as static rather than dynamic features that can change in social contexts. We investigate four axes of behavioral plasticity that may modulate interaction within mixed-species groups: 1) species' selective preference for joining certain groups, 2) species' ability to flexibly change their behavior in response to groupmates' behavior, and 3) shifts and/or 4) expansions of species' niche occupancy when foraging with conspecifics versus when foraging with heterospecifics. We assess variation in these axes of behavioral plasticity in an Australian mixed-species avian community. All species had selective preferences for flocks of certain strata, and some flexibly matched their flockmates' foraging strata. Three species exhibited patterns of niche shift, and one species showed niche expansion. These findings suggest that species converge in strata in mixed-species flocks despite the potential for increased competition and emphasize that species can plastically react to changes in their social environment in numerous ways. Acknowledgment of such plasticity is likely integral to understanding the nuances of heterospecific interactions.</p>
Figure 2 in Epiphytic Bryophyte And Lichen Communities In Relation To Tree And Forest Stand Variables In Populus Tremula Forests Of South-East Latvia
Figure 2. Epiphytic bryophyte and lichen species in the studied territories. Tade Micr – Microreserve in Tadenava, Augs land – Augšzeme Protected Landscape Area, Star Rese – Starinas mežs Nature Reserve. Signal species include all WKH indicator species and red-listed species.
Figure 1. Studied territories. 1 in Epiphytic Bryophyte And Lichen Communities In Relation To Tree And Forest Stand Variables In Populus Tremula Forests Of South-East Latvia
Figure 1. Studied territories. 1 – Microreserve in Tadenava, 2– Augšzeme Protected Landscape Area, 3 – Starinas mežs Nature Reserve.
Data from: Trechus (Coleoptera: Carabidae) of Appalachia: A phylogenetic insight into the history of high elevation leaf litter communities
<p>Elevation gradients provide a wealth of habitats for a wide variety of organisms. The southern Appalachian Mountains in eastern United States are known for their high biodiversity and rates of endemism in arthropods, including in high-elevation leaf-litter taxa that are often found nowhere else on earth. Trechus Clairville (Coleoptera: Carabidae) is a genus of litter inhabitants with a near-global distribution and over 50 Appalachian species. These span two subgenera, Trechus s. str. and Microtrechus Jeannel, largely restricted to north and south of the Asheville basin, respectively. Understanding the diversification of these 3–5 mm flightless beetles through geological time can provide insights into how the litter-arthropod community has responded to historical environments, and how they may react to current and future climate change. We identified beetles morphologically and sequenced six genes to reconstruct a phylogeny of the Appalachian Trechus. We confirmed the Asheville Basin as a biogeographical barrier with a split between the north and south occurring towards the end of the Pliocene. Finer scale biogeography, including mountain-range occupancy, was not a reliable indication of relatedness, with group ranges overlapping and many instances of species-, species group-, and subgeneric sympatry. This may be because of the recent divergence between modern species and species groups. Extensive taxonomic revision of the group is required for Trechus to be useful as a bioindicator, but their high population density and speciose nature make them worth additional time and resources.</p>
Fig. 2 in New Geographic Record Of Myxobolus portulacalensis (Saraiva & Molnar, 1990) And Spinitectus Inermis (Zeder, 1800) In European Eel (Anguilla Anguilla) Parasite Communities From Latvia Freshwaters
Fig. 2. Male Spinitectus inermis (Zeder, 1800) body from stomach of European eel (Anguilla anguilla) caught in Lake Usma, Latvia (100 x magnification). A - anterior end; B – posterior end.
Fig. 1 in New Geographic Record Of Myxobolus portulacalensis (Saraiva & Molnar, 1990) And Spinitectus Inermis (Zeder, 1800) In European Eel (Anguilla Anguilla) Parasite Communities From Latvia Freshwaters
Fig. 1. Spores of Myxobolus portucalensis (Saraiva and Molnar, 1990) from fins of European eel (Anguilla anguilla) caught in Lake Usma, Latvia (600 x magnification).
Fig. 1 in Spider community responds to litter complexity: insights from a small-scale experiment in an exotic pine stand
Fig. 1. Mean density of individuals (A, individuals.g-1 of dry litter) and morphospecies (B, species.g-1 of dry litter adults only) ± standard error of hunting and web-building spiders in simple and complex substrate treatments in a pine stand in Minas do Leão, Southern Brazil.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.