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2,620 results for “Molecular Phylogeny”
FIGURES 9–11 in A new microphthalmic stygobitic Graptodytes Seidlitz from Morocco, with a molecular phylogeny of the genus (Coleoptera, Dytiscidae)
FIGURES 9–11. Genitalia of G. eremitus n. sp. (holotype); 9, median lobe, ventral view; 10, median lobe, lateral view; 11, right paramere (photos: J. Fresneda).
FIGURES 6–8 in A new microphthalmic stygobitic Graptodytes Seidlitz from Morocco, with a molecular phylogeny of the genus (Coleoptera, Dytiscidae)
FIGURES 6–8. Detail of the lateral view of the left eye of 6, G. e re m it us n. sp.; 7, G. atlantis; 8, G. ignotus (photos: J. Fresneda).
FIGURES 3–5. Graptodytes eremitus n in A new microphthalmic stygobitic Graptodytes Seidlitz from Morocco, with a molecular phylogeny of the genus (Coleoptera, Dytiscidae)
FIGURES 3–5. Graptodytes eremitus n. sp. (holotype, previous to DNA extraction, submersed in ethanol); 3, dorsal view; 4, ventral view; 5, detail of the marginal setae of the elytra. Note the membranous wings, the genitalia and the longitudinal impressions at both sides of the pronotum, visible through the translucent cuticle (photos: I. Ribera).
FIGURES 1–2 in A new microphthalmic stygobitic Graptodytes Seidlitz from Morocco, with a molecular phylogeny of the genus (Coleoptera, Dytiscidae)
FIGURES 1–2. Habitus of Graptodytes eremitus n. sp. (holotype, after DNA extraction, specimen mounted dry); 1, dorsal view (photo: J. Fresneda); 2, lateral view (photo: J. Gómez-Zurita).
FIGURE 7 in Morphology and Molecular Phylogeny of the East and Southeast Asian Meghimatium slugs (Gastropoda: Pulmonata: Philomycidae) and description of a new species
FIGURE 7. Radula of Meghimatium baoshanense sp. nov. showing the right side of marginal teeth (paratype 1).
FIGURE 1 in Morphology and Molecular Phylogeny of the East and Southeast Asian Meghimatium slugs (Gastropoda: Pulmonata: Philomycidae) and description of a new species
FIGURE 1. Sampling localities of seven Meghimatium species (CN from China; HK from Hong Kong; JP from Japan; MAS from Malaysia; TL from Thailand; TW from Taiwan).
FIGURE 8 in Morphology and Molecular Phylogeny of the East and Southeast Asian Meghimatium slugs (Gastropoda: Pulmonata: Philomycidae) and description of a new species
FIGURE 8. Genitalia of Meghimatium baoshanense sp. nov. (paratype 2). A, atrium; Ag, albumen gland; Hd, hermaphroditic duct; Od, oviduct; Ot, ovotestis; P, penis; Prm, penial retractor muscle; Psd, papillae of spermathecal duct; Sp, spermatheca; Sd, spermathecal duct; Spov, spermoviduct; V, vagina; Vd, vas deferens.
FIGURE 4 in Morphology and Molecular Phylogeny of the East and Southeast Asian Meghimatium slugs (Gastropoda: Pulmonata: Philomycidae) and description of a new species
FIGURE 4. Right-side, dorsal and ventral views of Meghimatium baoshanense sp. nov. (A) Holotype; (B) Paratype 1; (C) Paratype 2.
FIGURE 3 in Morphology and Molecular Phylogeny of the East and Southeast Asian Meghimatium slugs (Gastropoda: Pulmonata: Philomycidae) and description of a new species
FIGURE 3. Bayesian tree of Meghimatium specimens reconstructed with concatenated DNA sequences of COI, 16S and 28S genes. Statistical supports for each node (node numbers were on the branches of the tree) in NJ, MP, BI and ML analyses were shown in the table on the left. An asterisk (*) indicates a node value <50.
FIGURE 2 in Morphology and Molecular Phylogeny of the East and Southeast Asian Meghimatium slugs (Gastropoda: Pulmonata: Philomycidae) and description of a new species
FIGURE 2. Genitalia of 6 previously described Meghimatium species. (A) M. fruhstorferi (from Tsai et al. 2005); (B) M. bilineatum (from Tsai et al. 2005); (C) M. pictum (from Tsai et al. 2005); (D) M. burchi (from Tsai & Wu 2006); (E) M. striatum (ESRI-MOL-05-0030); (F) M. uniforme (ESRI-MOL-04-0005). A, atrium; Od, oviduct; P, penis; Prm, penial retractor muscle; Sp, spermatheca; Sd, spermathecal duct; Spov, spermoviduct; V, vagina; Vd, vas deferens, (A)(B)(C) Scale bar=5mm; (D)(E)(F) Scale bar=1mm.
FIGURE 1. Bayesian tree derived from cyt b in Invalidity of Hynobius yunanicus and molecular phylogeny of Hynobius salamander from continental China (Urodela, Hynobiidae)
FIGURE 1. Bayesian tree derived from cyt b data for hynobiid salamanders (sample number at the top of species name). Onychodactylus japonicus was used as outgroup. Nodal values indicate Bayesian posterior probability and bootstrap supports for ML inferences (1000 replicates). Numbers in shaded circles show samples from China.
FIGURE 7 in Molecular phylogeny and morphological revision of the Ctenotus labillardieri (Reptilia: Squamata: Scincidae) species group and a new species of immediate conservation concern in the southwestern Australian biodiversity hotspot
FIGURE 7. Photograph in life of Ctenotus ora sp. nov. from Pinjarra, Western Australia (WAM R119059).
FIGURE 5 in Molecular phylogeny and morphological revision of the Ctenotus labillardieri (Reptilia: Squamata: Scincidae) species group and a new species of immediate conservation concern in the southwestern Australian biodiversity hotspot
FIGURE 5. Back patterns in the Ctenotus labillardieri species group. A–D illustrate geographic variation in C. labillardieri and E–J show representative back patterns in the other species in the group. The variation shown within C. labillardieri is not confined to the clades illustrated. A) C. labillardieri (R135665; lineage 6), B) C. labillardieri (R117354, lineage 1), C) C. labillardieri (R142908, lineage 2), D) C. labillardieri (166085, lineage 7), E) C. catenifer (R163143), F) C. delli (R13444), G) C. gemmula (R150245), H) C. lancelini (R18874), I) C. youngsoni (R66208), J) C. ora sp. nov. (R131983). Scale bars are all 1cm.
FIGURE 4 in Molecular phylogeny and morphological revision of the Ctenotus labillardieri (Reptilia: Squamata: Scincidae) species group and a new species of immediate conservation concern in the southwestern Australian biodiversity hotspot
FIGURE 4. Summary of results for the principal component analyses (PCAs) of the morphological data. Mean principal component scores and standard deviations are shown with sample sizes noted.
FIGURE 3 in Molecular phylogeny and morphological revision of the Ctenotus labillardieri (Reptilia: Squamata: Scincidae) species group and a new species of immediate conservation concern in the southwestern Australian biodiversity hotspot
FIGURE 3. Phylogram based on analysis of the combined data set. Values on selected branches refer to parsimony bootstrap values above the branch and Bayesian posterior probabilities below.
FIGURE 1 in Molecular phylogeny and morphological revision of the Ctenotus labillardieri (Reptilia: Squamata: Scincidae) species group and a new species of immediate conservation concern in the southwestern Australian biodiversity hotspot
FIGURE 1. Distribution of the seven major C. labillardieri (circle) clades, the C. lancelini (pentagonal) clade and the new taxon, C. ora sp. nov (square). Specimens used in both the genetic and morphological analyses are denoted with a white center, and specimens for which we only had morphological data are solid. The few specimens of C. labillardieri for which we only had tissue samples are denoted with an inner white ring. SCP refers to the Swan Coastal Plain west of the Darling Scarp. Black dotted lines represent boundaries between rainfall zones, as defined by Hopper (1979). Grey dotted line demarks the known range for C. ora sp. nov.
FIGURE 2 in Molecular phylogeny and morphological revision of the Ctenotus labillardieri (Reptilia: Squamata: Scincidae) species group and a new species of immediate conservation concern in the southwestern Australian biodiversity hotspot
FIGURE 2. Individual gene trees for the two genes used in this study. A) Representative parsimony phylogram for the ND2 data set. B) Representative phylogram from the nDNA data set. Values on selected branches refer to parsimony bootstrap values above the branch and Bayesian posterior probabilities below.
FIGURE 48 in Morphology, morphogenesis, and molecular phylogeny of a new brackish water ciliate, Pseudourostyla cristatoides n. sp., from Songjiho lagoon on the coast of East Sea, South Korea
FIGURE 48. Phylogenetic tree of 18S rRNA gene sequences showing the position of Pseudourostyla cristatoides n. sp. based on maximum likelihood (ML) and Bayesian inference (BI). Both bootstrap values for ML and posterior probability values for BI are represented on branches. Nodes with a solid circle show fully supported branches (100% ML, 100% BI).
FIGURES 32–42 in Morphology, morphogenesis, and molecular phylogeny of a new brackish water ciliate, Pseudourostyla cristatoides n. sp., from Songjiho lagoon on the coast of East Sea, South Korea
FIGURES 32–42. Photomicrographs of Pseudourostyla cristatoides n. sp. during interphase (32–34, holotype specimen) and morphogenesis (35–42) after protargol impregnation. 32, 34. Ventral views, with arrow and arrowhead indicating macronucleus and micronucleus, respectively. 33. Dorsal view showing complete dorsal kineties and each arrow marks the leftmost and the rightmost dorsal kineties. 35, 36. Ventral views of individuals in early dividing stage, arrows indicate oral primordium patches, arrowhead denotes dedifferentiated buccal cirrus. 37, 38. Ventral views of middle dividers, arrows and arrowheads indicate left and right marginal anlagen, respectively. 39–42. Ventral (39, 40, 42) and dorsal view (41) of late dividers showing migrating buccal cirrus (arrow in 39), frontoterminal cirri (arrows in 40, 42), pretransverse cirri (arrowheads in 40), and dorsal kineties anlagen 1 and 11 (arrows in 41). Scale bars: 100 μm.
FIGURES 24–31 in Morphology, morphogenesis, and molecular phylogeny of a new brackish water ciliate, Pseudourostyla cristatoides n. sp., from Songjiho lagoon on the coast of East Sea, South Korea
FIGURES 24–31. Photomicrographs of Pseudourostyla cristatoides n. sp. from life (bright field illumination, 24–29) and methyl green-pyronin impregnation (30, 31). 24–26. Dorsal views, arrows mark contractile vacuoles. 27. Ventral view to show arrangement of cirri. 28, 29. Dorsal views, arrow denotes narrowly spaced extrusomes, arrowheads in 29 indicate dorsal bristles. 30, 31. Extruded cortical granules (trichocyst type). Scale bars: 100 μm
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.