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975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Single-Cell Transcriptomics Reveals the Differentiation and Spatial Signatures underlying Sheep Hair Follicle Heterogeneity and Wool Curvature
GEO Series GSE186204. Ovis aries. 2 samples. Type: Expression profiling by high throughput sequencing.
Deciphering the molecular mechanism of flight loss in mulberry silkworm through the integration of single-cell and spatial transcriptomics [B_scRNA-seq]
GEO Series GSE253666. Bombyx mori; Bombyx mandarina. 4 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics of triple negative breast cancer
GEO Series GSE210616. Homo sapiens. 43 samples. Type: Other.
Single-cell and spatial transcriptomics reveal somitogenesis in gastruloids
GEO Series GSE123187. Homo sapiens; Mus musculus. 92 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomic and single-nucleus analysis reveals heterogeneity in a gigantic single-celled syncytium
GEO Series GSE173809. Badhamia polycephala. 949 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptome profiling for nasopharyngeal carcinoma [GeoMx-DSP]
GEO Series GSE299775. Homo sapiens. 28 samples. Type: Other.
Visium Spatial Transcriptomics of IPMN model mice with Kras;Gnas mutation
GEO Series GSE275405. Mus musculus. 4 samples. Type: Other.
Spatial transcriptomics of the distal lung bronchioles unravel the mechanisms underlying epithelial desquamation in idiopathic pulmonary fibrosis (IPF)
GEO Series GSE268850. Homo sapiens. 11 samples. Type: Other.
Anatomical-spatial dissection of single-cell retinal transcriptomics paves the road for new horizons in complement immunology [Mm]
GEO Series GSE116426. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
A spatial and projection-based transcriptomic atlas of paraventricular hypothalamic cell types (Smart-Seq2)
GEO Series GSE303081. Mus musculus. 81 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics of healing and non-healing diabetic foot ulcers
GEO Series GSE166120. Homo sapiens. 23 samples. Type: Expression profiling by high throughput sequencing; Other.
Sex differences in Non-Alcoholic Steatohepatitis (NASH) in mice evoked by a fructose-palmitate-cholesterol (FPC)-enriched diet [spatial transcriptomics]
GEO Series GSE259410. Mus musculus. 2 samples. Type: Other.
Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer’s disease mouse model as revealed by spatial transcriptomics (Stereo-seq Spatial Transcriptomics)
GEO Series GSE263789. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing; Other.
Interleukin-17 governs hypoxic adaptation of injured epithelium [spatial transcriptomics]
GEO Series GSE166948. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
A cost-effective and flexible workflow for high-resolution spatial transcriptomics in fixed tissue
GEO Series GSE292893. Homo sapiens; Mus musculus. 52 samples. Type: Expression profiling by high throughput sequencing.
Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [MERFISH]
GEO Series GSE299886. Homo sapiens; synthetic construct. 3 samples. Type: Other.
Spatial transcriptomics of adenoid cystic carcinoma of the lacrimal gland
GEO Series GSE228685. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing; Other.
Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics]
GEO Series GSE272236. Mus musculus. 8 samples. Type: Other.
A spatial and projection-based transcriptomic atlas of paraventricular hypothalamic cell types
GEO Series GSE303256. Mus musculus. 131 samples. Type: Expression profiling by high throughput sequencing.
Shared inflammatory glial cell signature after brain injury, revealed by spatial, temporal and cell-type-specific profiling of the murine cerebral cortex [spatial transcriptomics]
GEO Series GSE226208. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.