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1,393 results for “traces”
Formal-Specification-to-Code Trace Links Recovery
<p>The experiment data and the code used in our experiments to evaluate the performance of the proposed formal-specification-to-code trace links establishment method, and the other exsiting text-based trace links recovery methods, including Latent Semantic Indexing, Vector Space Model, Word2Vec embeddings, and LLM-based embeddings, are here. It originate from three projects. The first one is an open source VDM-SL specification of an AccountSys and its Java implementation. It comes from the book “Formal Software Development: From VDM to Java” written by Quentin Charatan and Aaron Kans. Both the VDM-SL formal specification and the Java implementation of the AccountSys were developed and provided by Prof. Aaron Kans from University of East London. It illustrates how to model bank accounts and transactions made on these as a series of deposits and withdrawals. Bank.java file implementing the GUI of the system in the source code is not used since it contains syntactical error and cannot build AST. The second project involves the SOFL specification and the Java implementation of an ATM system. The operations on current accounts of an ATM, such as deposit, withdraw, show balance, print out transaction records are specified by using SOFL formal language and implemented by using Java langauge. The third project involves an open source VDM-SL specification of a hotel system along with its C implementation. The specification describes a hotel management system where guests can check in, enter rooms, and manage cards associated with rooms and keys. The VDM-SL specification, created by Daniel Jackson and presented in his book “Software Abstractions: Logic, Language, and Analysis”. </p>
Dataset for: Combined Ca, Sr isotope and trace element analyses of Late Cretaceous dinosaur teeth: assessing diet versus diagenesis
Open the record for dataset details and reuse information.
Supplementary material S2: Video evidence of vibrational traces originating from an individual Varroa mite walking.
<p>A video demonstrating an individual mite walking, together with the measured vibrations in spectrogram form. The logged coordinates of mite movement allow the individual to be tracked within the field of view which is continuously updated. The right-hand side panel detects the changes between two consecutive images of the original cropped video panel. When motionless the mite remains dark blue in the said panel, but the pixels flash red when the mite is walking. The synchronicity between mite movement and the vibrational traces seen on the top spectrogram panel can clearly be seen. This movie soundtrack, which is the accelerometer signal, also demonstrates the audible ‘clicking’ of mite walking vibrations, which are also synchronous with the movement and spectrogram traces. The spectrogram of the accelerometer data is shown with respect to time, with acceleration magnitude in logarithmic (to the base 10) format, with dark red always forced to be 6x10<sup>-3 </sup>m/s<sup>2</sup> (for ease of viewing the walking traces) as the highest point of magnitude at any point in time and dark blue as 1/50 of the maximum. This movie and its corresponding audio track are slowed from the original 50 to 25 frames per second for better viewing.</p>
Swift-BAT Response Files for NITRATES: Forward Ray Tracings at IMX > 0
<p>These tarred files contain the forward ray tracings onto the BAT detector plane for source positions at IMX ranging from 0.0 to 1.8 and IMY ranging from -1 to 1 with a grid spacing of 0.002. The files are in a npy format and are designed for use in the NITRATES analysis. </p>
Swift-BAT Response Files for NITRATES: Forward Ray Tracings at IMX < 0
<p>These tarred files contain the forward ray tracings onto the BAT detector plane for source positions at IMX ranging from -1.8 to 0.0 and IMY ranging from -1 to 1 with a grid spacing of 0.002. The files are in a npy format and are designed for use in the NITRATES analysis. </p>
Tracing topography-dependent diagenesis and pedogenesis with iron oxides and magnetic particles on a volcano
<p>Data supporting this research are available for people who engage in scientific research. Note that the data can not be used for any commercial activities.</p>
Structure and Function of Axo-axonic Inhibition — Calcium Traces
<p>These files contain the calcium traces and behavioral data for the functional imaging in the paper:</p> <p><strong>Chandelier cell anatomy and function suggest a variably distributed but common signal.</strong><br> Schneider-Mizell, C. Bodor, A.L., Collman, F. Brittain,D. Bleckert, AA, Dorkenwald, S., Turner N.L. Macrina, T. Lee, K. Lu, R. Wu, J. et al. (2020) bioRxiv 2020.03.31.018952v1; doi: <a href="https://doi.org/10.1101/2020.03.31.018952">https://doi.org/10.1101/2020.03.31.018952</a></p> <p>Descriptions of the files can be found in the metadata of the nwb files.</p>
Datasets: Carbon sources and pathways for citrate secreted by human prostate cancer cells determined by NMR tracing and metabolic modeling
<p>Zipped NMR datasets:</p> <p>data1 LNCaP medium with [U-<sup>13</sup>C<sub>4</sub>]aspartate</p> <p>data2 LNCaP medium with [1,6-<sup>13</sup>C<sub>2</sub>]glucose</p> <p>data3 LNCaP medium with [2-<sup>13</sup>C]pyruvate</p> <p>data4 VCaP medium with [1,6-<sup>13</sup>C<sub>2</sub>]glucose</p> <p>data5 VCaP medium with [U-<sup>13</sup>C<sub>4</sub>]aspartate -glucose +pyruvate</p> <p>data6 VCaP medium with [5-<sup>13</sup>C]glutamine</p> <p>data7 VCaP medium with [2-<sup>13</sup>C]pyruvate -glucose +aspartate</p> <p>data8 VCaP medium with [5-<sup>13</sup>C]glutamine</p> <p>data9 VCaP medium with [5-<sup>13</sup>C]glutamine</p> <p>data10 VCaP medium with [5-<sup>13</sup>C]glutamine</p> <p>data11 LNCaP and VCaP medium with and without zinc(II)</p> <p>data12 LNCaP and VCaP medium with and without zinc(II)</p> <p>data13 LNCaP and VCaP medium with and without zinc(II)</p> <p>data14 LNCaP medium with [U-<sup>13</sup>C<sub>4</sub>]aspartate -glucose +pyruvate</p> <p>data15 LNCaP medium with [5-<sup>13</sup>C]glutamine</p> <p>data16 LNCaP medium with [2-<sup>13</sup>C]pyruvate</p> <p>data17 LNCaP medium with [5-<sup>13</sup>C]glutamine</p> <p>data18 VCaP medium with [1,6-<sup>13</sup>C<sub>2</sub>]glucose</p> <p>data19 VCaP medium with [1,6-<sup>13</sup>C<sub>2</sub>]glucose</p> <p>data20 VCaP medium with [2-<sup>13</sup>C]pyruvate</p> <p>data21 LNCaP medium with [2-<sup>13</sup>C]pyruvate</p> <p>data22 LNCaP medium with [2-<sup>13</sup>C]pyruvate +citr. Spiking</p> <p>data23 LNCaP medium with [5-<sup>13</sup>C]glutamine</p> <p>data24 LNCaP medium with [5-<sup>13</sup>C]glutamine</p> <p>data25 LNCaP medium with [2-<sup>13</sup>C]pyruvate</p> <p>data26 VCaP medium with [2-<sup>13</sup>C]pyruvate</p> <p>data27 VCaP medium with [2-<sup>13</sup>C]pyruvate -glucose +aspartate</p> <p>data28 VCaP medium with [U-<sup>13</sup>C<sub>4</sub>]aspartate -glucose +pyruvate</p> <p>data29 LNCaP medium with [2-<sup>13</sup>C]pyruvate</p> <p>data30 LNCaP medium with [2-<sup>13</sup>C]pyruvate</p> <p>data31 LNCaP medium with [2-<sup>13</sup>C]pyruvate</p> <p>data32 VCaP medium with [2-<sup>13</sup>C]pyruvate -glucose +aspartate</p> <p>data33 VCaP medium with [U-<sup>13</sup>C<sub>4</sub>]aspartate -glucose +pyruvate</p> <p>data34 VCaP medium with [U-<sup>13</sup>C<sub>4</sub>]aspartate -glucose +pyruvate</p> <p>data35 LNCaP medium with [U-<sup>13</sup>C<sub>4</sub>]aspartate</p> <p>data36 VCaP medium with [U-<sup>13</sup>C<sub>4</sub>]aspartate -glucose +pyruvate</p> <p>data37 LNCaP medium with [5-<sup>13</sup>C]glutamine + citr. spiking</p>
Let's Trace It: Fine-Grained Serverless Benchmarking using Synchronous and Asynchronous Orchestrated Applications - Dataset
<p>This dataset contains the raw collected traces, preprocessed versions of the traces, and summary figures for the data associated with our manuscript <em>Let's Trace It: Fine-Grained Serverless Benchmarking using Synchronous and Asynchronous Orchestrated Applications.</em></p> <p>It contains over 7.5 million (7 564 830) traces of the ten applications integrated with ServiBench. The measurements were conducted on AWS Lambda in the us-east-1 region in late 2021 and early 2022. For more details on how the traces were collected we refer to our manuscript.</p> <p>For details on how to replicate our existing analysis on this dataset, we refer to https://github.com/ServiBench/ReplicationPackage</p>
Mercury isotope trace magma mixing and crust-mantle interactions in the Yidun arc, eastern Tibetan Plateau
<p>Magma mixing between mafic and felsic melts is widespread in open magmatic process. However, tracing the magma sources of different endmembers is challenging, because elemental and isotopic information of different endmembers commonly achieved equilibrium during magma interactions. Mantle and crustal reservoirs show distinct signatures of mercury (Hg) isotope mass-independent fractionation, making Hg isotope an emerging tool to trace mantle- and crustal-derived magmas. Here we report the Hg isotope data of two types (Type-I and Type-II) of mafic microgranular enclaves (MMEs) and their host granitoids, which have similar whole-rock Sr-Nd and zircon Hf isotope composition, from the Daocheng-Cuojiaoma batholith, Eastern Tibetan Plateau, SW China. Zircon U-Pb dating indicates both the host granitoids and two types of MMEs formed coevally at ca. 216 – 217 Ma, coherent to the subduction of Garzê–Litang ocean (a branch of Paleo-Tethys ocean). The host granitoids are metaluminous to weakly peraluminous characteristics (A/CNK = 0.98 – 1.05) and exhibit negative to slightly positive ∆<sup>199</sup>Hg values (-0.2 to 0.02 ‰), indicating their source magma was a mixture of terrestrial sediments- and mantle-derived melts. Type-I MMEs display arc-like trace element patterns, low SiO<sub>2</sub> (53.8 to 55.0 wt%) and positive ∆<sup>199</sup>Hg values (0.00 to 0.10 ‰), indicating their derivation from a subduction-related fluid/melt metasomatized mantle source. Type-II MMEs show intervening concentrations of major/trace elements, and intermediate ∆<sup>199</sup>Hg values (-0.18 to 0.02), suggesting they were generated via mixing between the temporally and spatially coexisting first two magmas (i.e., type-I MMEs and granitoid). This study demonstrates the powerful use of Hg isotope for understanding magma sources and crustal-mantle interactions.</p>
Data from: Traces of Genetic but Not Epigenetic Adaptation in the Invasive Goldenrod Solidago canadensis Despite the Absence of Population Structure
<p><strong>General information</strong></p> <p>This deposition contains the datasets that were used in the statistical analysis of the manuscript entitled <strong>Traces of genetic but not epigenetic adaptation in the invasive goldenrod <em>Solidago canadensis</em> despite the absence of population structure </strong>published in Frontiers in Ecology and Evolution (doi: <a href="https://doi.org/10.3389/fevo.2022.856453">10.3389/fevo.2022.856453</a>).</p> <p><strong>Uploaded files</strong></p> <ul> <li><strong>README</strong> file to explain the datasets</li> <li><strong>AFLP/MSAP metadata</strong> called EckertHerdenStiftDurkavanKleunenJoshi_2022_FrontEcolEvol_AFLPMSAP_meta_data.txt</li> <li><strong>AFLP scoring dataset</strong> called EckertHerdenStiftDurkavanKleunenJoshi_2022_FrontEcolEvol_AFLP_scoring_data.txt</li> <li><strong>MSAP scoring dataset</strong> called EckertHerdenStiftDurkavanKleunenJoshi_2022_FrontEcolEvol_MSAP_scoring_data.txt</li> <li><strong>MSAP mix1-scoring dataset</strong> called EckertHerdenStiftDurkavanKleunenJoshi_2022_FrontEcolEvol_MSAP_scoring_data_mix1.txt</li> <li>All files were combined in a <strong>.zip file</strong></li> </ul>
Data from: A new approach for investigating spatial relationships of ichnofossils: a case study of Ediacaran–Cambrian animal traces
<p class="MsoNormal"><span class="Heading1Char"><em>Abstract — </em></span>Trace fossils record foraging behaviours, the search for resources in patchy environments, of animals in the rock record. Quantification of the strength, density and nature of foraging behaviours enables the investigation of how these may have changed through time. Here, we present a novel approach to explore such patterns using spatial point process analyses to quantify the scale and strength of ichnofossil spatial distributions on horizontal bedding planes. To demonstrate the utility of this approach we use two samples from the terminal Ediacaran Shibantan Member in South China (between 551 and 543 Ma) and the early Cambrian Nagaur Sandstone in northwestern India (between 539 and 509 Ma). We find that ichnotaxa on both surfaces exhibited significant non-homogeneous lateral patterns, with distinct levels of heterogeneity exhibited by different types of trace fossils. In the Shibantan, two ichnotaxa show evidence for mutual positive aggregation over a shared resource, suggesting the ability to focus on optimal resource areas. Trace fossils from the Nagaur Sandstone exhibit more sophisticated foraging behaviour, with greater niche differentiation. Critically, mark correlation functions highlight significant spatial autocorrelation of trace fossil orientations, demonstrating the greater ability of these Cambrian tracemakers to focus on optimal patches. Despite potential limitations, these analyses hint at changes in the development and optimisation of foraging at the Ediacaran–Cambrian transition and highlight the potential of spatial point process analysis to tease apart subtle differences in behaviour in the trace fossil record.</p>
Dataset of bootup power consumption traces for four networking equipments.
<p>This dataset contains a collection of four NumPy files (.npy) that contain around 500 examples of power consumption. These power consumptions corresponds to the bootup sequences for four different networking equipment (two routers and two switches).</p>
Twindroid - System calls traces - Android apps - Extention
<p>TwinDroid - a dataset of system calls traces, from both benign and infected Android apps.</p> <p>For other traces you can visit https://zenodo.org/record/6464808#.Yls2yVyZNH4</p> <p>To trace apps, you can use our script in: https://github.com/RaphaelKhoury/automated-apk-tracing</p> <p> </p> <p> </p>
mar-file-system/GUFI-Filesystem-Traces: GUFI Filesystem Traces
<p>The GUFI Filesystem Traces are a series of formatted text files containing metadata taken from the filesystems of LANL HPC systems. Each line is an entry from the filesystem, containing the entry's name, stat(2) data, link name (if applicable), several filesystem specific fields (unused in these traces), and the entry's pinode. The entry name, link name, uid, and gid fields have been anonymized to preserve privacy. These traces allow for source filesystem trees (without any file contents) to be regenerated in various ways, allowing for experiments with filesystem metadata from real HPC systems without needing access to the real filesystems. yellusers is a scan of the yellow NFS home directory from April 2019. yellprojs is a scan of the yellow NFS projects directory from April 2019. ttscratch and anony are Trinitite user scratch space scans from March 2019 and April 2019, respectively. scr4 is from the yellow Lustre scratch space in June 2020.</p> <p>LA-UR-21-21017</p>
ARCHI4MOM: Using Tracing Information to Extract the Architecture of Microservice-based Systems from Message-oriented Middleware
<p>The data published here are relevant for ESCA_2022 publication. </p>
Distribution. Ogasawara (Bonin) Is (Chichijima and Hahajima) and Iwo Is (Kita-Iwoto, Iwoto, and Minami-Iwoto) of SJapan. Sightings, GPS recordings, or traces of foraging are reported for Mukojima, Nishijima, Anijima, Ototojima, and Higashijima Is. in Pteropodidae
Distribution. Ogasawara (Bonin) Is (Chichijima and Hahajima) and Iwo Is (Kita-Iwoto, Iwoto, and Minami-Iwoto) of SJapan. Sightings, GPS recordings, or traces of foraging are reported for Mukojima, Nishijima, Anijima, Ototojima, and Higashijima Is.
Dog Valley Fault Traces
<p>This is a shapefile containing linework of the Dog Valley Fault in Northern California. </p>
Raw Data for "Frequency stabilisation and SI tracing of mid-infrared quantum-cascade lasers for precision molecular spectroscopy"
<p>The MasterRunner.m Matlab file in the main folder can execute individual Matlab scripts in different folders in order to analyze the data and generate the figures in the papers.</p> <p>The folder BeatNotes contains the raw data and the corresponding analysis scripts for getting the beats of the 729 laser, QCL, and the US laser. </p> <p>The folder AllanDeviation contains the Allan deviation measurements of the QCL and the 729 nm laser with respect to the GPS disciplined oscillator and the US laser. The file Analysis_v2.m can be executed in order to analyze the Allan deviation data.</p> <p>The folder TrackingOscillatorSetup contains the electronic schematic, list of components and a photo of the complete home-built VCO setup.</p>
Policy compliance detection with system call traces
<p>This repository includes data and results in chapter 4 - Policy compliance detection with syscall profiling of Ph.D. thesis "A policy compliance detection architecture for data exchange infrastructures"</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.