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Dataset results
882 results for “3d model”
GDNF drives rapid tubule morphogenesis in novel 3D in vitro model for ADPKD
GEO Series GSE151951. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
MicroRNA expression profiling in a mouse spinal cord injury model [P15 and P90, 12h and 3d]
GEO Series GSE89517. Mus musculus. 24 samples. Type: Non-coding RNA profiling by high throughput sequencing.
3D genome landscaping of in vitro totipotent cellular models [RNA-seq]
GEO Series GSE299617. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Tuning the 3D-microenvironment of reprogrammed tubule cells enhances biomimetic modeling of polycystic kidney disease.
GEO Series GSE148840. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Rapid 3D Bioprinting of Multicellular Model Recapitulating Pterygium Microenvironment
GEO Series GSE180343. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Mitochondria dysregulation contributes to secondary neurodegeneration progression post-contusion injury in human 3D in vitro triculture brain tissue model.
GEO Series GSE237013. Homo sapiens. 32 samples. Type: Expression profiling by high throughput sequencing.
Assessing susceptibility for polycyclic aromatic hydrocarbon toxicity in an in vitro 3D respiratory model for asthma
GEO Series GSE239797. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
The Lithospheric Structure of the Saharan Metacraton from 3D Integrated Geophysical-Petrological Modelling
<p>We provide the final lithospheric model of Saharan Metacraton resulting from our work presented in the manuscript. It is part of the archive file “Model_data_2020-02-06”</p>
A 3D geometric model for the human forearm
<p>A set of 3D meshes for a human forearm including;</p> <p>- radius and ulna bones</p> <p>- carpal bones</p> <p>- interosseous membrane</p> <p>- carpal ligaments</p> <p>- triangular fibrocartilage complex</p> <p>- landmarks at the connection sites between bones and ligaments</p>
A pore-scale 3D dynamic morphological modeling and physical characterization of hydrate-bearing sediment based on computed tomography images
<p><strong>Introduction</strong></p> <p>This supporting information includes one figure S1, which is the representative elemental volume (REV) used in this study. And the figure S1 is consisted of 300 slices with a voxel size of 4.4 μm. There are two phases in the REV: the sand and the pore.</p> <p> </p> <p>Figure S1 is uploaded with file name Figure S1-REV300.am, which is the representative elemental volume (REV) used in this study</p>
Pore-scale 3D dynamic morphological modeling and physical characterization of hydrate-bearing sediment based on computed tomography images
<p>This supporting information includes one Figure-S1-REV300, which is the representative elemental volume (REV) used in this study. And the Figure-S1-REV300 is 300*300*300 with a voxel size of 4.4 μm. There are two phases in the REV: the sand and the pore.</p> <p>Figure S1 is uploaded with file name Figure S1-REV300.tif, which is the representative elemental volume (REV) used in this study</p>
The Resilience of Habitable Climates Around Circumbinary Stars: 3D climate model data Part 1
<p>Climate modeling outputs used in the paper, "The Resilience of Habitable Climates Around Circumbinary Stars", to be published JGR-Planets Special Edition on Exoplanets. Files contain 4 Earth years of hourly time cadence outputs of basic climate fields. Hourly time-cadence is needed in order to grasp the temporal variations of circumbinaries. </p> <p> </p> <p> </p>
Cross-correlation functions, dispersion data, and 3D velocity models of the Chao lake
<p>We obtained a 3-D isotropic and azimuthal anisotropic model beneath the Chao Lake. These datasets contain the cross-correlation functions, dispersion data we picked, and the models we obtained.</p>
Data from: From the cover: three-dimensional (3d) heparg spheroid model with physiologically relevant xenobiotic metabolism competence and hepatocyte functionality for liver toxicity screening.
Effective prediction of human responses to chemical and drug exposure is of critical importance in environmental toxicology research and drug development. While significant progress has been made to address this challenge using invitro liver models, these approaches often fail due to inadequate tissue model functionality. Herein, we describe the development, optimization, and characterization of a novel three-dimensional (3D) spheroid model using differentiated HepaRG cells that achieve and maintain physiologically relevant levels of xenobiotic metabolism (CYP1A2, CYP2B6, and CYP3A4/5). This invitro model maintains a stable phenotype over multiple weeks in both 96- and 384-well formats, supports highly reproducible tissue-like architectures and models pharmacologically- and environmentally important hepatic receptor pathways (ie AhR, CAR, and PXR) analogous to primary human hepatocyte cultures. HepaRG spheroid cultures use 50–100× fewer cells than conventional two dimensional cultures, and enable the identification of metabolically activated toxicants. Spheroid size, time in culture and culture media composition were important factors affecting basal levels of xenobiotic metabolism and liver enzyme inducibility with activators of hepatic receptors AhR, CAR and PXR. Repeated exposure studies showed higher sensitivity than traditional 2D cultures in identifying compounds that cause liver injury and metabolism-dependent toxicity. This platform combines the well-documented impact of 3D culture configuration for improved tissue functionality and longevity with the requisite throughput and repeatability needed for year-over-year toxicology screening.
3D printed interstellar grain model (core+mantle) plus simple molecules
<p>The video shows the 3D printed interstellar grain with the internal silicate core and the water ice mantle derived from the ACO-FROST model of ice.</p>
3D Model of William Cabell Rives Bust
This is a 3D model of the marble bust of William Cabell Rives by artist Paul Garyard from the University of Virginia Library Special Collections; It was scanned with a Creaform GoScan Spark by ARH5600 Fall 2021 student Natalie Chavez; Source: Objaverse 1.0 / Sketchfab
3D Models of the Anonymous yellow coffin set in the Los Angeles County Museum of Art (LACMA)
<p>3D Models of <a href="https://collections.lacma.org/node/229429" target="_blank" rel="noopener"><strong>Anonymous yellow coffin set (inner lid and mummy board)</strong></a> in the <strong>Los Angeles County Museum of Art</strong> </p> <p>The 3D models consider only the external upper part of coffin lids as far down as the lower part of the crossed forearms. </p> <p>The dataset contains:</p> <ol> <li>zip files with the 3D models generated with the software Agisoft Metashape 1.8.3 (.jpg; .mtl; .obj);</li> <li>.tif files with the orthophtgraphs of the coffins textured and not textured</li> <li>Exported Report of 3D models (.pdf)</li> <li>.pdn file with the overlapped layers (orthophotographs textured and not textured, drawings and points) generated with the open source paint. net</li> </ol> <p>The dataset is part of the results of the <a href="https://facesrevealed.museoegizio.it/"><strong>Faces Revealed</strong> <strong>Project</strong></a>. The project has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 895130</p> <p><strong>If you publish material based on datasets contained in this archive, then, in your acknowledgements, please cite the original source, referring to it through the following DOI: 10.5281/zenodo.10590118</strong></p>
3D model of Cyaneae
This is my first attempt at using Pix4d software on a Phantom 4 platform to create a 3D model of the ancient Lycian city of Cyaneae, located in present day Turkey. Source: Objaverse 1.0 / Sketchfab
Sword on Rock 3D Model
This is an energy sword that has been placed on a rock, this model was created using Blender 3D. Website: https://akashdev.000webhostapp.com Source: Objaverse 1.0 / Sketchfab
Torresaviñan model 3D dron
El castillo de La Torresaviñán, atalaya de los siglos XI y XII sin remodelar y parcialmente destruida en la Guerra de Sucesión española. Se constituyó como torre fuerte aislada para la defensa y control de todo un área y de los pueblos o aldeas cercanos, sobre un cerro visualmente privilegiado. La medición por escala de la torre ha permitido establecer su altura en 16 metros, lo que supone un área de visión desde lo alto que abarca al sur las estibaciones de la Sierra de Megorrón en el límite con Cifuentes; al oeste los territorios de Sigüenza: al norte Alcolea del Pinar; y al este el Otero de Sacecorbo. Realizado con Mavic 2 Entreprise Dual Metashape 1.6 pro a baja resolución. Source: Objaverse 1.0 / Sketchfab
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.