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1,123
datasets available to search
ShareScore release 0.7.1
Dataset results
1,123 results for “Cis”
A single-cell massively parallel reporter assay detects cell type specific cis-regulatory activity
GEO Series GSE188639. Homo sapiens; Escherichia coli; Mus musculus. 19 samples. Type: Expression profiling by high throughput sequencing; Other.
Statistical learning quantifies transposable element-mediated cis-regulation
GEO Series GSE208403. Homo sapiens. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Arabidopsis Flower and Embryo Developmental Genes are Repressed in Seedlings by Different Combinations of Polycomb Group Proteins in Association with Distinct Sets of Cis-regulatory Elements
GEO Series GSE67322. Arabidopsis thaliana. 29 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Tumor Necrosis Factor Alpha Regulates Skeletal Myogenesis by Inhibiting SP1 Interaction with cis-Acting Regulatory Elements within the Fbxl2 Gene Promoter
GEO Series GSE120600. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Allelic chromatin structure is a pervasive feature of imprinted domains and functions cooperatively with cis-acting long non-coding RNAs at the Mest-Copg2 locus [Bisulfite-seq]
GEO Series GSE312070. Mus musculus. 6 samples. Type: Methylation profiling by high throughput sequencing.
An epigenomic approach to identifying differential overlapping and cis-acting lncRNAs in cisplatin-resistant cancer cells
GEO Series GSE108139. Homo sapiens. 16 samples. Type: Expression profiling by array.
Epigenetic Mapping of Cis-Regulatory Elements in the Developing Mouse and Pig Forelimbs.
GEO Series GSE277840. Sus scrofa; Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cis-regulation of IL-22 gene in type 3 immune cells [RNA-Seq]
GEO Series GSE314572. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Transposons repressed by H3K27me3 were co-opted as cis-regulatory elements of H3K27me3 controlled protein-coding genes during evolution of plants
GEO Series GSE221635. Marchantia polymorpha; Cyanidioschyzon merolae strain 10D. 26 samples. Type: Expression profiling by high throughput sequencing.
The p53-regulated long noncoding RNA, lincRNA-p21 promotes the expression of Polycomb target genes and enforces the G1/S checkpoint by activating p21 in cis [RNA-seq]
GEO Series GSE52957. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Expression of Arabidopsis cis-NAT pairs in inflorescences, leaves and roots
GEO Series GSE49381. Arabidopsis thaliana. 9 samples. Type: Expression profiling by array.
A draft map of cis-regulatory sequences in the mouse genome
GEO Series GSE29184. Mus musculus. 143 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Genome variation profiling by high throughput sequencing.
Unique regulation of cis-regulatory elements facilitates reacquisition of pluripotency [RNA-seq]
GEO Series GSE117204. Mus musculus. 30 samples. Type: Expression profiling by high throughput sequencing.
Prevalence, evolution and cis-regulation of diel transcription in Chlamydomonas reinhardtii
GEO Series GSE62671. Chlamydomonas reinhardtii. 16 samples. Type: Expression profiling by high throughput sequencing.
cis sequence effects on gene expression
GEO Series GSE8394. Homo sapiens. 30 samples. Type: Expression profiling by array.
Cis- and trans- regulatory divergence between progenitor species determines gene-expression novelty in Arabidopsis allopolyploids
GEO Series GSE29687. Arabidopsis suecica; Arabidopsis arenosa x Arabidopsis thaliana; Arabidopsis thaliana; Arabidopsis arenosa. 5 samples. Type: Expression profiling by high throughput sequencing.
ICE-A: A chromatin interaction-based tool for improved annotation of distal cis-regulatory elements reveals novel regulatory functions of lineage-restricted transcription factors in lymphocytic develo
GEO Series GSE279961. Mus musculus. 2 samples. Type: Other.
A dual cis-regulatory code links IRF8 to constitutive and inducible gene expression in macrophages.
GEO Series GSE56121. Mus musculus. 53 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide discovery of daily transcriptome, cis-regulatory elements and transcription factor footprints in the monarch butterfly brain [RNA-Seq]
GEO Series GSE122442. Danaus plexippus. 32 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide discovery of daily transcriptome, cis-regulatory elements and transcription factor footprints in the monarch butterfly brain
GEO Series GSE122447. Danaus plexippus. 39 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.