Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,249
datasets available to search
ShareScore release 0.9.0
Dataset results
1,249 results for “R data”
Figure 2 from: Mesibov R (2012) Known unknowns, Google Earth, plate tectonics and Mt Bellenden Ker: some thoughts on locality data. ZooKeys 247: 61-67. https://doi.org/10.3897/zookeys.247.4195
Figure 2 - Plan of the Mt Bellenden Ker cableway showing current and former tower numbers. SS = summit station, BS = base station. Contours (100 m) and streamlines are only approximate and are from the 1:50000 scale 'Bartle Frere' map produced by the Royal Australian Survey Corps in 1986.
Figure 1 from: Mesibov R (2012) Known unknowns, Google Earth, plate tectonics and Mt Bellenden Ker: some thoughts on locality data. ZooKeys 247: 61-67. https://doi.org/10.3897/zookeys.247.4195
Figure 1 - View of the Mt Bellenden Ker cableway from the east in June, 1976. Lower towers are labelled with their current numbers. Image by Len Webb, reproduced with the permission of the copyright holder, Griffith University.
Figure 2 from: Novo M, Fernández R, Fernández Marchán D, Gutiérrez M, Diaz Cosin D (2012) Compilation of morphological and molecular data, a necessity for taxonomy: The case of Hormogaster abbatissae sp. n. (Annelida, Clitellata, Hormogastridae). ZooKeys 242: 1-17. https://doi.org/10.3897/zookeys.242.3996
Figure 2 - Top, part of the parsimony tree recovered by Novo et al. (2011), showing the clade where Hormogaster abbatissae was placed (in that work it is named sp n.). Bottom, network representation for 16S-tRNA and COI recovered by SplitsTree4 of the closest species (surrounded by a black square in the tree above) and Hormogaster elisae and Aporrectodea trapezoides as distant references.The number of specimens used is indicated in parenthesis.
Figure 1 from: Novo M, Fernández R, Fernández Marchán D, Gutiérrez M, Diaz Cosin D (2012) Compilation of morphological and molecular data, a necessity for taxonomy: The case of Hormogaster abbatissae sp. n. (Annelida, Clitellata, Hormogastridae). ZooKeys 242: 1-17. https://doi.org/10.3897/zookeys.242.3996
Figure 1 - External morphology of Hormogaster abbatissae. An illustration of nephridial bladders in segments 14 and 50 is shown in the upper right corner.
Figure 7 from: Diaz Cosin D, Novo M, Fernández R, Fernández Marchán D, Gutiérrez M (2014) A new earthworm species within a controversial genus: Eiseniona gerardoi sp. n. (Annelida, Lumbricidae) - description based on morphological and molecular data. ZooKeys 399: 71-87. https://doi.org/10.3897/zookeys.399.7273
Figure 7 - Bayesian inference tree based on COI sequences of Eiseniona gerardoi and other lumbricids represented in GeneBank. Eiseniona gerardoi (see UCMLT codes in Table 1) clusters with Eiseniona albolineata.
Figure 3 from: Guralnick RP, Cellinese N, Deck J, Pyle RL, Kunze J, Penev L, Walls R, Hagedorn G, Agosti D, Wieczorek J, Catapano T, Page EDM (2015) Community Next Steps for Making Globally Unique Identifiers Work for Biocollections Data. ZooKeys 494: 133-154. https://doi.org/10.3897/zookeys.494.9352
Figure 3 - Identifier schemes differ in whether redirections and mappings to ensure stability are centrally managed or not. Top: a DOI dereferencing service like CrossRef or Datacite redirects to the actual content provider; the URIs of content data and RDF metadata are publicly visible and can be used as independent (albeit often unstable) identifiers. Bottom: A linked open data pattern, where each content provider assumes the responsibility for maintaining a stable mapping; the content negotiation is internal. Modified after Hagedorn 2013.
Figure 2 from: Guralnick RP, Cellinese N, Deck J, Pyle RL, Kunze J, Penev L, Walls R, Hagedorn G, Agosti D, Wieczorek J, Catapano T, Page EDM (2015) Community Next Steps for Making Globally Unique Identifiers Work for Biocollections Data. ZooKeys 494: 133-154. https://doi.org/10.3897/zookeys.494.9352
Figure 2 - Example of a PURL-URI as a QR-Code, in this example attached to a digitised lichen type specimen in the Natural History Museum, University of Oslo. The QR-Code corresponds to http://purl.org/nhmuio/id/c1a8b878-a4f9-448b-be00-26cbad58b11c.
Figure 1 from: Guralnick RP, Cellinese N, Deck J, Pyle RL, Kunze J, Penev L, Walls R, Hagedorn G, Agosti D, Wieczorek J, Catapano T, Page EDM (2015) Community Next Steps for Making Globally Unique Identifiers Work for Biocollections Data. ZooKeys 494: 133-154. https://doi.org/10.3897/zookeys.494.9352
Figure 1 - Example of UUIDs embedded within QR-Codes on microcentrifuge tube labels. The 5 mm × 5 mm QR-Codes (Version 2) are printed with a standard laser printer on sheets of self-adhesive 9 mm dots, and scan reliably with a standard barcode reader, while still providing room for a human-readable 5-character prefix + 5-digit number (the human-readable number and UUID are permanently cross-linked in the data management system). Photo: Robert K. Whitton.
Figure 7 from: Wayland MT, Vainio JK, Gibson DI, Herniou EA, Littlewood TDJ, Väinölä R (2015) The systematics of Echinorhynchus Zoega in Müller, 1776 (Acanthocephala, Echinorhynchidae) elucidated by nuclear and mitochondrial sequence data from eight European taxa. ZooKeys 484: 25-52. https://doi.org/10.3897/zookeys.484.9132
Figure 7 - Aquatic environment (freshwater/marine) mapped on to the fully resolved phylogeny inferred from the concatenated 28S and COI sequences. Bold letter indicates genus according to Petrochenko's (1956) scheme: E, Echinorhynchus; M, Metechinorhynchus; P, Pseudoechinorhynchus. The bar chart shows the mean number of paired cement glands in each taxon. Data for Echinorhynchus spp. are from Table 2. Since the particular cement gland pattern exhibited by each of the species of the Echinorhynchus gadi group is not known, data from a collection of worms determined as Echinorhynchus gadi have been used for Echinorhynchus gadi spp. I & III (the bars for these species are shaded grey rather than black, to indicate a lower level of confidence in the data). Since Acanthocephalus lucii typically displays paired cement glands (Petrochenko 1956), the mean number of paired cement glands in this taxon was assumed to be approximately three (bar shaded grey to indicate approximation).
Figure 6 from: Wayland MT, Vainio JK, Gibson DI, Herniou EA, Littlewood TDJ, Väinölä R (2015) The systematics of Echinorhynchus Zoega in Müller, 1776 (Acanthocephala, Echinorhynchidae) elucidated by nuclear and mitochondrial sequence data from eight European taxa. ZooKeys 484: 25-52. https://doi.org/10.3897/zookeys.484.9132
Figure 6 - Phylogram estimated using Bayesian inference analysis of concatenated 28S rDNA and COI sequence data. Numbers at nodes are clade support values (%) for each method of phylogeny reconstruction (BI/ML/MP). Tree is rooted on the outgroup Acanthocephalus lucii.
Figure 4 from: Wayland MT, Vainio JK, Gibson DI, Herniou EA, Littlewood TDJ, Väinölä R (2015) The systematics of Echinorhynchus Zoega in Müller, 1776 (Acanthocephala, Echinorhynchidae) elucidated by nuclear and mitochondrial sequence data from eight European taxa. ZooKeys 484: 25-52. https://doi.org/10.3897/zookeys.484.9132
Figure 4 - Phylogram estimated using Bayesian inference analysis of COI sequence data. Numbers at nodes are clade credibility values (%) for each method of phylogeny reconstruction (BI/ML/MP). Tree is rooted on the outgroup Acanthocephalus lucii.
Figure 8 from: Wayland MT, Vainio JK, Gibson DI, Herniou EA, Littlewood TDJ, Väinölä R (2015) The systematics of Echinorhynchus Zoega in Müller, 1776 (Acanthocephala, Echinorhynchidae) elucidated by nuclear and mitochondrial sequence data from eight European taxa. ZooKeys 484: 25-52. https://doi.org/10.3897/zookeys.484.9132
Figure 8 - Structure of the vagina in Echinorhynchus spp. A Echinorhynchus brayi, a species with a single vaginal sphincter B Echinorhynchus salmonis, a species with two vaginal sphincters.
Figure 5 from: Wayland MT, Vainio JK, Gibson DI, Herniou EA, Littlewood TDJ, Väinölä R (2015) The systematics of Echinorhynchus Zoega in Müller, 1776 (Acanthocephala, Echinorhynchidae) elucidated by nuclear and mitochondrial sequence data from eight European taxa. ZooKeys 484: 25-52. https://doi.org/10.3897/zookeys.484.9132
Figure 5 - Phylogenetic relationships of Echinorhynchus spp. inferred from maximum parsimony analysis of COI data-set. Trees are rooted on the outgroup Acanthocephalus lucii. A Phylogram estimated using maximum parsimony analysis of COI sequence data. Numbers at nodes indicate bootstrap support (n = 10,000) B Consensus cladogram from maximum parsimony analysis of COI sequence data excluding third codon positions. Numbers at nodes indicate bootstrap support (n = 10,000).
Figure 2 from: Wayland MT, Vainio JK, Gibson DI, Herniou EA, Littlewood TDJ, Väinölä R (2015) The systematics of Echinorhynchus Zoega in Müller, 1776 (Acanthocephala, Echinorhynchidae) elucidated by nuclear and mitochondrial sequence data from eight European taxa. ZooKeys 484: 25-52. https://doi.org/10.3897/zookeys.484.9132
Figure 2 - Cement gland arrangements of the genera recognised by Petrochenko (1956). E. Echinorhynchus. M. Metechinorhynchus. P. Pseudoechinorhynchus.
Figure 1 from: Wayland MT, Vainio JK, Gibson DI, Herniou EA, Littlewood TDJ, Väinölä R (2015) The systematics of Echinorhynchus Zoega in Müller, 1776 (Acanthocephala, Echinorhynchidae) elucidated by nuclear and mitochondrial sequence data from eight European taxa. ZooKeys 484: 25-52. https://doi.org/10.3897/zookeys.484.9132
Figure 1 - Historical record of species discovery in Echinorhynchus. Recognised diversity, as measured by the cumulative number of described taxa, plotted against time. Only species recognised by Amin (2013) are included.
Figure 3 from: Wayland MT, Vainio JK, Gibson DI, Herniou EA, Littlewood TDJ, Väinölä R (2015) The systematics of Echinorhynchus Zoega in Müller, 1776 (Acanthocephala, Echinorhynchidae) elucidated by nuclear and mitochondrial sequence data from eight European taxa. ZooKeys 484: 25-52. https://doi.org/10.3897/zookeys.484.9132
Figure 3 - Phylogram estimated using Bayesian inference analysis of 28S rDNA sequence data. Numbers at nodes are clade support values (%) for each method of phylogeny reconstruction (BI/ML/MP). Tree is rooted on the outgroup Acanthocephalus lucii.
Figure 2c from: Cocuzza GEM, Di Silvestro S, Giordano R, Rapisarda C (2015) Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5' barcode and 3' COI regions. ZooKeys 529: 123-144. https://doi.org/10.3897/zookeys.529.6081
Figure 2c - MrBayes tree estimated using 648 bp at the 3' end of COI for selected Anuraphis species.
Figure 2d from: Cocuzza GEM, Di Silvestro S, Giordano R, Rapisarda C (2015) Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5' barcode and 3' COI regions. ZooKeys 529: 123-144. https://doi.org/10.3897/zookeys.529.6081
Figure 2d - MrBayes tree estimated using 658 bp at the 5' end of COI for selected Anuraphis species.
Figure 1a from: Cocuzza GEM, Di Silvestro S, Giordano R, Rapisarda C (2015) Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5' barcode and 3' COI regions. ZooKeys 529: 123-144. https://doi.org/10.3897/zookeys.529.6081
Figure 1a - Neighbor-Joining tree showing relationships among selected Anuraphis species estimated using 648 bp at the 3' end of the COI mitochondrial gene. Distance were estimated using the p-distance model of sequence evolution.
Figure 2b from: Cocuzza GEM, Di Silvestro S, Giordano R, Rapisarda C (2015) Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5' barcode and 3' COI regions. ZooKeys 529: 123-144. https://doi.org/10.3897/zookeys.529.6081
Figure 2b - Likelihood tree estimated using 658 bp at the 5' end of COI for selected Anuraphis species.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.