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13,499 results for “researcher”
Figure 5a. from: Defining the Scholarly Commons - Reimagining Research Communication. Report of Force11 SCWG Workshop, Madrid, Spain, February 25-27, 2016 - Research Ideas and Outcomes 2: e9340 (26 May 2016) https://doi.org/10.3897/rio.2.e9340
Figure 5a. - Fair of the Future of Scholarly CommunicationFigure 5a.Figure 5b.Figure 5c.Figure 5d. <br> Example of Trello card with tags. "using the public domain" - the idea name; #G2 - the idea came from the Group 2; #viz - the idea is ready to be included in the visualization; #triple - the idea has a link to another idea in the group's vision.
Figure 3b. from: Defining the Scholarly Commons - Reimagining Research Communication. Report of Force11 SCWG Workshop, Madrid, Spain, February 25-27, 2016 - Research Ideas and Outcomes 2: e9340 (26 May 2016) https://doi.org/10.3897/rio.2.e9340
Figure 3b. - Islands of possibilities (part of YKON facilitation) at Madrid workshopFigure 3a.Islands of possibilities located in workshop roomFigure 3b.Personality modification islandFigure 3c.Observation island <br> Personality modification island
Figure 6c. from: Defining the Scholarly Commons - Reimagining Research Communication. Report of Force11 SCWG Workshop, Madrid, Spain, February 25-27, 2016 - Research Ideas and Outcomes 2: e9340 (26 May 2016) https://doi.org/10.3897/rio.2.e9340
Figure 6c. - Workshop impressionsFigure 6a.Figure 6b.Figure 6c.Figure 6d. <br> One group's vision as a interconnected elements (triples, derived after session 7)
Supplementary material 1: Reviewer Comments from: Widening the circle of care: An arts-based, participatory dialogue with stakeholders on cancer care for First Nations, Inuit, and Métis peoples in Ontario, Canada - Research Ideas and Outcomes 2: e9115 (25 May 2016) https://doi.org/10.3897/rio.2.e9115
The attached file includes the evaluation of the postdoctoral fellowship application from three reviewers. Guidelines for reviewers are available online for more inforamtion (http://www.cihr-irsc.gc.ca/e/33043.html), including the rating scale that is used to score each section of the evaluation.
Supplementary material 1: Animation of BrainBox's workflow from: Open Neuroimaging Laboratory - Research Ideas and Outcomes 2: e9113 (08 May 2016) https://doi.org/10.3897/rio.2.e9113
Animation showing the different functionalities of BrainBox: opening a Magnetic Resonance Imaging volume, viewing it, and editing it collaboratively online.
Figure 3. from: Visual Parkinson's Disease Rating Scale: A Universal Iconic Questionnaire for Epidemiological Studies in India - Research Ideas and Outcomes 2: e8834 (03 May 2016) https://doi.org/10.3897/rio.2.e8834
Figure 3. - TimelineThis Gantt chart provides an estimate of the relative timing and duration for achieving each of the Aims.
Supplementary material 2: BrainBox Cartoon from: Open Neuroimaging Laboratory - Research Ideas and Outcomes 2: e9113 (08 May 2016) https://doi.org/10.3897/rio.2.e9113
Cartoon showing the idea of distributed collaboration on Magnetic Resonance Imaging data.
Figure 1. from: Visual Parkinson's Disease Rating Scale: A Universal Iconic Questionnaire for Epidemiological Studies in India - Research Ideas and Outcomes 2: e8834 (03 May 2016) https://doi.org/10.3897/rio.2.e8834
Figure 1. - First pass at a VPDRS static graphicFigure 1 corresponds to the first self-administered MDS-UPDRS question:1.7 SLEEP PROBLEMS.Over the past week, have you had trouble going to sleep at night or staying asleep through the night? Consider how rested you felt after waking up in the morning.0: Normal: No problems.1: Slight: Sleep problems are present but usually do not cause trouble getting a full night of sleep.2: Mild: Sleep problems usually cause some difficulties getting a full night of sleep.3: Moderate: Sleep problems cause a lot of difficulties getting a full night of sleep, but I still usually sleep for more than half the night.4: Severe: I usually do not sleep for most of the night."
Figure 3c. from: Defining the Scholarly Commons - Reimagining Research Communication. Report of Force11 SCWG Workshop, Madrid, Spain, February 25-27, 2016 - Research Ideas and Outcomes 2: e9340 (26 May 2016) https://doi.org/10.3897/rio.2.e9340
Figure 3c. - Islands of possibilities (part of YKON facilitation) at Madrid workshopFigure 3a.Islands of possibilities located in workshop roomFigure 3b.Personality modification islandFigure 3c.Observation island <br> Observation island
Figure 3a. from: Defining the Scholarly Commons - Reimagining Research Communication. Report of Force11 SCWG Workshop, Madrid, Spain, February 25-27, 2016 - Research Ideas and Outcomes 2: e9340 (26 May 2016) https://doi.org/10.3897/rio.2.e9340
Figure 3a. - Islands of possibilities (part of YKON facilitation) at Madrid workshopFigure 3a.Islands of possibilities located in workshop roomFigure 3b.Personality modification islandFigure 3c.Observation island <br> Islands of possibilities located in workshop room
Figure 8a. from: Defining the Scholarly Commons - Reimagining Research Communication. Report of Force11 SCWG Workshop, Madrid, Spain, February 25-27, 2016 - Research Ideas and Outcomes 2: e9340 (26 May 2016) https://doi.org/10.3897/rio.2.e9340
Figure 8a. - Workshop visualization - collection of ideas and group visionsFigure 8a.Visualization showing all ideas generated collectively in the first round (session 3, dark grey) or second round (session 4, light grey), and those generated by the respective groups (solid colors) as part of their vision of scholarly communication. Figure 8b.Visualizaton showing all groups' visions as interconnected elements (triples), with common elements overlapping. <br>
Figure 2. from: Visual Parkinson's Disease Rating Scale: A Universal Iconic Questionnaire for Epidemiological Studies in India - Research Ideas and Outcomes 2: e8834 (03 May 2016) https://doi.org/10.3897/rio.2.e8834
Figure 2. - Prototype for the mobile phone appThis screen shows a pre-release version of Node, which will support the VPDRS/UPDRS modules. Here we present a means by which a person administering a questionnaire can securely log into and manipulate patient information locally and through cloud services and lastly an example clinician-administered UPDRS question.
Data supplementing the article Schomaker, J., Walper, D., Wittmann, B.C., & Einhäuser, W. (2017). Attention in natural scenes: Affective-motivational factors guide gaze independently of visual salience. Vision Research, 133, 161-175.
<p>These data supplement the article Schomaker, J., Walper, D., Wittmann, B.C., & Einhäuser, W. (2017). Attention in natural scenes: Affective-motivational factors guide gaze independently of visual salience. Vision Research, 133, 161-175.</p> <p>Use is free for academic purposes, provided the aforementioned article is appropriately cited.</p> <p>The directory contains the following files</p> <p>stimuli.tar.gz - stimuli used in this study; note that this is based on the MONS database, but some deviations from the final version of the database do exist.</p> <p>ratings.mat contains the variables<br> arousal - mean arousal rating<br> valence - mean valence rating<br> valence2 - squared mean valence rating (after subtracting midpoint)<br> motivationalValue - mean motivation rating<br> motivaionalValue2 - squared mean motivation rating (after subtracting midpoint)</p> <p>All variables are 104x3, where the first dimension is the stimulus number, and the second dimension the motivation ground truth (aversive, neutral, appetitive)</p> <p><br> Experiment 1</p> <p>fixationsExperiment1.mat contains the variables fixationX, fixationY, fixationDuration, fixaitonOnset, fixationInitial, which contain for each fixation horizontal and vertical coordinate, the duration, the time of the onset relative to the trial onset and whether it is the initial fixation. All variables have dimensions 16x104x3x50, where the first dimension is the observer, the second the scene, the third the condition and the forth a counter of fixations. Whenever there are less than 50 fixations the remainder are filled with NaN.</p> <p><br> boundingBoxesExperiment1.mat contains for each critical object the bounding box coordinates x,y of upper left corner and width and height as variables boundingBoxX, boundingBoxY, boundingBoxW, boundingBoxH respectively. Note that this is relative to the eyetracker coordinates of experiment 1 (full display 1024x768, presentation in the center) and will therefore not match the coordinates of the images in the archive or the bounding box coordinates of experiment 2. Dimensions are 104x3, the dimensions representing scene number and condition, respectively.</p> <p><br> figure2.m uses these data to computes figure 2 of the article from these data</p> <p><br> dataForExperiment1.Rdata contains the data frame data, which contains for each fixation the values of the predictors used in the model of table 1. This is computed from the matlab data listed above in addition to the peak values of the AWS salience in the object.</p> <p><br> table1.R computes and prints the models for table 1</p> <p> </p> <p>Experiment 2</p> <p>fixationsExperiment2.mat contains fixation data for experiment 2. Variable names as in experiment 1. Dimensions are 18x99x3x3x50, where the first dimension is the observer, the second the image number, the third the visual condition, the third the motivational condition and the fifth the fixation count. Since only one visual condition was shown to each observer per motivational condition, there is an additional variable 'hasData', which is 1 if the image was presented to the observer in this condition and 0 otherwise. Since fixations can be outside the image and will therefore be excluded, there is also an additional variable fixationNumber to keep a correct count of the fixation number in the trial.</p> <p>boundingBoxesExperiment2.mat contains bounding box data for experiment 2 in image (and fixation) coordinates. Notation as for experiment 1, but coordinates refer to image and eyetracking coordinates used for experiment 2 and therefore can differ occasionally.</p> <p><br> figure3and4.m generates figures 3 and 4 of the article from these data files.</p> <p>dataForExperiment2.Rdata contains the data frame data, which contains for each fixation the values of the predictors used in the model of tables 2 amd 3. This is computed from the matlab data listed above in addition to the peak values of the AWS salience in the object. The fields imgMot and imgVis contain the motivational ground truth and the salience manipulation, respectively.</p> <p>table2.R uses the Rdata file to compute the models for table 2 of the article and print summary results</p> <p>table3.R uses the Rdata file to compute the models for table 3 of the article and print summary results. Note that the computation can take substantial time; results might deviate slightly depending on the exact version of R and its libraries used.</p> <p> </p>
Dataset for: Research data management in academic institutions: a scoping review
<p><strong>Overview</strong></p> <p>This dataset contains the raw data for the manuscript: <br> Perrier L, Blondal E, Ayala AP, Dearborn D, Kenny T, Lightfoot D, Reka R, Thuna M, Trimble L, MacDonald H. Research data management in academic institutions: A scoping review. PLOS One. 2017 May 23;12(5):e0178261. doi: 10.1371/journal.pone.0178261.</p> <p>Full-text available at: <a href="http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0178261 ">http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0178261 </a></p> <p><strong>Data and Documentation Files</strong> </p> <p>Five files make up the dataset: </p> <ol> <li>Data Dictionary: RDMScopingReview_DataDictionary.pdf</li> <li>Data Abstraction Sheet: RDMScopingReview_StudyCharacteristics.csv</li> <li>Data Abstraction Sheet: RDMScopingReview_Setting.csv</li> <li>Data Abstraction Sheet: RDMScopingReview_DataCollectionTools.csv</li> <li>Data Abstraction Sheet: RDMScopingReview_Outcomes.csv</li> </ol> <p>Contact: Laure Perrier: <a href="https://orcid.org/0000-0001-9941-7129">orcid.org/0000-0001-9941-7129</a></p>
Research data supporting "One-pot synthesis of multiple protein-encapsulated DNA flowers and their application in intracellular protein delivery"
<p>Research data supporting the publication:</p> <p>Eunjung Kim, Limor Zwi-Dantsis, Natalie Reznikov, Catherine S. Hansel, Shweta Agarwal, and Molly M. Stevens, <strong>One-Pot Synthesis of Multiple Protein-Encapsulated DNA Flowers and Their Application in Intracellular Protein Delivery, </strong>2017, Adv Mater,<strong> </strong>DOI:<strong> </strong>10.1002/adma.201701086.</p> <p> </p> <p> </p>
Dataset supplementing Stoll, J., Thrun, M., Nuthmann, A., & Einhäuser, W. (2015). Overt attention in natural scenes: Objects dominate features. Vision Research, 107, 36-48. doi: 10.1016/j.visres.2014.11.006
<p>These data supplement the publication</p> <p>Stoll, J., Thrun, M., Nuthmann, A., & Einhäuser, W. (2015). Overt attention in natural scenes: Objects dominate features. Vision Research, 107, 36-48. doi: 10.1016/j.visres.2014.11.006</p> <p>and be used freely for scientific purposes provided the aforementioned paper is appropriately cited.</p> <p>Note that the image files cannot be provided on this site due to copyright restrictions.</p> <p>The dataset contains the following files:</p> <p>maps_01.mat - maps_72.mat:</p> <p>For each image the 6 maps used in the paper are contained, the maps of experiment 1 are labelled as in the paper (AWS, OOM, nOOM, PVL,UNI), AWS2 is the AWS map for the modified stimuli of experiments 2 and 3.</p> <p>exp?_fixations.mat contains all fixations of the respective experiment.</p> <p>For experiment 1, there are the variables xFix, yFix, durFix, which contain the x position, the y condition, and the fixation duration of each fixation. Dimensions are images x subjects x fixation number, where the first fixation is the 0th (initial) fixation. The variable condition (image x subject) contains the condition in which the respective image was shown to the subject. For the main analysis only the "0" condition was used, refer to the paper's appendix for the other conditions.</p> <p>For experiment 2 and 3, variables are called xFixByImage, yFixByImage, dFixByImage and the dimensions are subject x image x fixation number. In addition tFixByImage contains the start of the fixation relative to trial onset (negative for the 0th fixation).<br> In both cases, empty entries are filled with nans.</p> <p><br> computeROC.m is a helper function called by other functions.</p> <p><br> figure1.m through figure7.m reproduce the figures from the paper to exemplify data usage.</p> <p> </p>
Data supplementing article "Transport of riverine material from multiple rivers in the Chesapeake Bay: important control of estuarine circulation on the material distribution" under review at the Journal of Geophysical Research - Biogeoscience
<p>These data supplement the article: Du, J. and J. Shen, Transport of riverine material from multiple rivers in the Chesapeake Bay: important control of estuarine circulation on the material distribution, under review at the Journal Of Geophysical Research: Biogeoscience</p> <p>contact: Jiabi Du, jiabi@vims.edu</p> <p>Below are descriptions of the data files included here:</p> <p>1. Monthly mean tracer output [1985-2014]</p> <p>-netCDF format results for monthly mean tracer concentrations from different sources (Susquehanna, Potomac, Rappahannock, York, James Rivers, and Coastal Ocean)</p> <p>-grid information are also included</p> <p>2. Matlab Scripts For Plotting.zip:</p> <p>-Matlab scripts used to plot the horizontal map, the vertical profile for the along channel section, the vertical profile for cross-channel sections. The script enables users to define the period and section no to plot. </p> <p>3. tracer influx and outflux ratio at 9 cross-section.xls:</p> <p>-an excel file contains the bottom tracer influx ratio and surface tracer outflux ratio for different rivers at different sections. </p>
Research data supporting "Probing amylin fibrillation at an early stage via a tetracysteine-recognising fluorophore"
<p>Research data supporting the publication:</p> <p>Wang S. et al., 2017, Talanta, DOI: 10.1016/j.talanta.2017.05.015</p>
A Questionnaire to Assess the Research Practices and Services Related to the Academic and Research Staff at the Institutions of Higher Education in Palestine - Survey Data
<p>Data generated as part of a needs assessment survey conducted as part of ROMOR, a project funded by the Erasmus Plus Programme of the European Union in the period from October 2016 to October 2019. A questionnaire was prepared under the supervision of Palestinian Universities participating in the project. The results of the study will be used to create and develop institutional repositories to store the digital outputs of scientific research at the institutions of higher education in Palestine. The results will be also used to provide the vocational and academic training, and the institutional policies required to manage, organize the use, and populate the prospective repositories. This objective will contribute in promoting the access to and benefit of the results of scientific research in Palestine, and increase its impact at the local and international levels. This questionnaire was distributed to the representative of each institution, who in turn forwarded it to the suitable persons in the institution. Data was collected between January 4th and February 19th 2017. Paper and electronic versions of a questionnaire were prepared in both Arabic and English. The project coordinators at partner PS HEIs were requested to circulate the electronic questionnaire to all researchers and members of academic staff. Data was collected by ROMOR partners at:</p> ● The Islamic University of Gaza (IUG) ● Al-Quds Open University (QOU) ● Birzeit University (BZU) ● Palestine Technical University-Kadoori (KAD)
A Questionnaire to Assess the Research Practices and Services Related to the Academic and Research Staff at the Institutions of Higher Education in Palestine - Survey Data with Pie Charts
<p>Data generated as part of a needs assessment survey conducted as part of ROMOR, a project funded by the Erasmus Plus Programme of the European Union in the period from October 2016 to October 2019. A questionnaire was prepared under the supervision of Palestinian Universities participating in the project. The results of the study will be used to create and develop institutional repositories to store the digital outputs of scientific research at the institutions of higher education in Palestine. The results will be also used to provide the vocational and academic training, and the institutional policies required to manage, organize the use, and populate the prospective repositories. This objective will contribute in promoting the access to and benefit of the results of scientific research in Palestine, and increase its impact at the local and international levels. This questionnaire was distributed to the representative of each institution, who in turn forwarded it to the suitable persons in the institution. Data was collected between January 4th and February 19th 2017. Paper and electronic versions of a questionnaire were prepared in both Arabic and English. The project coordinators at partner PS HEIs were requested to circulate the electronic questionnaire to all researchers and members of academic staff. Data was collected by ROMOR partners at:</p> <p>● The Islamic University of Gaza (IUG)</p> <p>● Al-Quds Open University (QOU)</p> <p>● Birzeit University (BZU)</p> <p>● Palestine Technical University-Kadoori (KAD)</p> <p>[Data visualised as pie charts]</p> <p> </p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.