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13,397 results for “sp. nov.”
Fig. 1 in Streptomyces krungchingensis sp. nov., isolated from soil
Fig. 1. Scanning electron micrograph showing the flexuous spore chains and smooth spore surface of strain KC-035T after growing on ISP2 medium at 30 ǪC for 14 days. Bar, 1 µm.
Fig. 1 in Bacillus maritimus sp. nov., a novel member of the genus Bacillus isolated from marine sediment
Fig. 1. Neighbour-joining tree based on 16S rRNA gene sequences showing the relationships between strain KS16-9T and related type strains in the genus Bacillus. Paenibacillus aestuarii CJ25T (EU570250) was used as an outgroup. Bootstrap values (>70 %) based on 100 re-sampled datasets are shown at branch nodes. Branches recovered with the maximum-parsimony and maximum-likelihood algorithms are indicated by filled circles. Bar, 0.01 substitutions per nucleotide position.
FIGURE 4 in Ophioglossum isanense sp. nov. (Ophioglossaceae, Pteridophyta) from Thailand
FIGURE 4. Distribution map of Ophioglossum isanense S. Petchsri, Li-Bing Zhang & T. Jaruwattanaphan, sp. nov. 1. Ban Phrao Community Forest, Watthana Nakhon, Sa Kaeo Province. 2. Phu Phan National Park, Sakon Nakhon Province. 3. Phu Pha Lek National Park, Sakon Nakhon Province. 4. Tum Pha Nam Thip Wildlife Sanctuary, Roi Et Province.
Fig. 2 in Paenibacillus shunpengii sp. nov., isolated from farmland soil
Fig. 2. Neighbour-joining phylogenetic tree based on the rpoB gene sequences showing relationships between strain YYJ7-1T and closely related species. The tree was rooted using the sequence of Brevibacillus brevis NBRC 100599 as the outgroup. Numbers at nodes represent bootstrap values (based on 1000 replicates). Bar, 0.05 substitutions per nucleotide position. GenBank accession numbers are shown in parentheses.
FIGURE 1 in Ophioglossum isanense sp. nov. (Ophioglossaceae, Pteridophyta) from Thailand
FIGURE 1. Portion of the maximum likelihood phylogeny of Ophioglossum cf. nudicaule, which is herewith described as O. isanense, based on seven plastid markers (atpB, rbcL, matK, psbA-trnH, rps4, rps4-trnS, trnLF) (based on Zhang et al., 2020).
FIGURE 3. Ophioglossum isanense S. Petchsri, Li in Ophioglossum isanense sp. nov. (Ophioglossaceae, Pteridophyta) from Thailand
FIGURE 3. Ophioglossum isanense S. Petchsri, Li-Bing Zhang & T. Jaruwattanaphan, sp. nov.—A. Habit.—B. Trophophyll.—C. Trophophyll apex.—D. Persistent leaf sheath at top of rhizome.—E. Fertile stalk with sporangia (Drawn by S. Chokrassameehirun based on T. Jaruwattanaphan et al. 200816-4).
Fig. 1 in Chryseoglobus indicus sp. nov., isolated from deep sea water
Fig. 1. Neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showing the relationship between strain CTD02-10-2T and related taxa. The tree was reconstructed in MEGA 7.0 using the Kimura two-parameter model. Closed circles indicate branches that were resolved using all three tree-making methods (maximum-likelihood, maximum-parsimony and neighbour-joining). Bootstrap values (expressed as percentages of 1000 replications) over 50% are shown at branching nodes. Bar, 0.01 substitutions per nucleotide position.
FIGURE 10 in Atacamaptilia ambrosiavora gen. et sp. nov. (Lepidoptera: Gracillariidae), a leaf miner of Ambrosia cumanensis (Asteraceae) in the Atacama Desert
FIGURE 10. Natural history Atacamaptilia ambrosiavora gen. et sp. nov. A. The host plant, Ambrosia cumanensis (Asteraceae) in a highly human-modified habitat in the type locality, the Azapa Valley, northern Chile. B–C. Mature leaf mines (white arrows) on the host plant, adaxial and abaxial, respectively. D. Young leaf mine (red arrow), square of C. E. Egg. F. Sap-feeding, dorsal. G. Tissue-feeding, laterodorsal. H. Tissue-feeding after color change previous to pupation, dorsal. Pupa, lateral. Scale bars 10, 10, 1, 0.1, 0.3, 1.4, 1.4 and 0.5 mm, respectively.
FIGURE 9 in Atacamaptilia ambrosiavora gen. et sp. nov. (Lepidoptera: Gracillariidae), a leaf miner of Ambrosia cumanensis (Asteraceae) in the Atacama Desert
FIGURE 9. Atacamaptilia ambrosiavora gen. et sp. nov., pupa. A–C. Ventral, dorsal and lateral. Scale bar 0.8 mm.
FIGURE 7 in Atacamaptilia ambrosiavora gen. et sp. nov. (Lepidoptera: Gracillariidae), a leaf miner of Ambrosia cumanensis (Asteraceae) in the Atacama Desert
FIGURE 7. Chaetotaxy of tissue-feeding Atacamaptilia ambrosiavora gen. et sp. nov. A. Head, frontal and lateral. B. Labrum, external and internal (epipharynx). C. Thorax and abdomen, lateral. Scale bars 0.01, 0.04 and 0.4 mm, respectively.
FIGURE 8 in Atacamaptilia ambrosiavora gen. et sp. nov. (Lepidoptera: Gracillariidae), a leaf miner of Ambrosia cumanensis (Asteraceae) in the Atacama Desert
FIGURE 8. Atacamaptilia ambrosiavora gen. et sp. nov., pupa scanning electron micrographs. A–C. Head, ventral, dorsal and lateral, respectively. D–E. Cocoon cutter, lateral and ventral, respectively. Frons and base of mouthparts, ventral. G. Mesothoracic seta, lateral. H. Spiracle A2, lateral. I Detail of transverse patch of spine-like projections of A3. J–K. Terminalia, dorsal and posterior, respectively. Spine of A10, square area of K. Scale bars 100, 100, 100, 10, 10, 50, 25, 10, 25, 50, 25, 10 and 5 μm, respectively.
FIGURE 5 in Atacamaptilia ambrosiavora gen. et sp. nov. (Lepidoptera: Gracillariidae), a leaf miner of Ambrosia cumanensis (Asteraceae) in the Atacama Desert
FIGURE 5. Scanning electron micrographs of tissue-feeding Atacamaptilia ambrosiavora gen. et sp. nov. A. Head, lateral. B. Head, dorsal. C. Head, ventral. D. Stemmata, lateral. E. Antenna, anterolateral. F. Labrum, frontal. G. Spinneret, anterolateral. H. Prothoracic leg, anterior. I. Tarsal claw, anterior. J. Abdominal ornamentation. K. Spiracle, A8, lateral. L. Crochets on proleg of A4, ventral. Anal shield and prolegs of A10, posterior. Scale bars 50, 50, 50, 10, 10, 10, 10, 25, 5, 5, 5, 10 and 50 μm, respectively.
FIGURE 6 in Atacamaptilia ambrosiavora gen. et sp. nov. (Lepidoptera: Gracillariidae), a leaf miner of Ambrosia cumanensis (Asteraceae) in the Atacama Desert
FIGURE 6. Chaetotaxy of sap-feeding Atacamaptilia ambrosiavora gen. et sp. nov. A. Head, frontal. B. Head, lateral. C. Larva, ventral. D. Larva, lateral. E. Larva, dorsal. Scale bars 0.1 and 0.2 mm, respectively.
FIGURE 4 in Atacamaptilia ambrosiavora gen. et sp. nov. (Lepidoptera: Gracillariidae), a leaf miner of Ambrosia cumanensis (Asteraceae) in the Atacama Desert
FIGURE 4. Scanning electron micrographs of the sap-feeding Atacamaptilia ambrosiavora gen. et sp. nov. A. Head, dorsal. B. Head, lateral. C. Labium-hypopharynx complex, ventral. D. Labial palp, ventral, enlarged rectangle of C. E. Antena, dorsal. F. Mesothorax ornamentation, dorsal. G. Spiracle prothorax, lateral. H. Ambulatory callosity of prothorax, ventral. I. Ambulatory callosity and vestigial leg of mesothorax, ventral. J. Ambulatory callosity of A5, ventral. Scale bars 50, 50, 20, 5, 10, 10, 5, 10, 10 and 20 μm, respectively.
FIGURE 3 in Atacamaptilia ambrosiavora gen. et sp. nov. (Lepidoptera: Gracillariidae), a leaf miner of Ambrosia cumanensis (Asteraceae) in the Atacama Desert
FIGURE 3. Atacamaptilia ambrosiavora gen. et sp. nov., genitalia. A. Male genitalia, ventral, phallus removed. B. Female genitalia, lateral. C. Digitate lobe of costa of male genitalia, open arrow in A. D. Longitudinal projections of phallus, lateroventral, red arrow in E. E. Phallus, ventral. F. Antrum, black arrow in B. Scale bars 0.1, 0.2, 0.1, 0.1, 0.1 and 0.2 mm, respectively.
FIGURE 2 in Atacamaptilia ambrosiavora gen. et sp. nov. (Lepidoptera: Gracillariidae), a leaf miner of Ambrosia cumanensis (Asteraceae) in the Atacama Desert
FIGURE 2. Atacamaptilia ambrosiavora gen. et sp. nov. A. Paratype male, dorsal view. B. Head, anterior view. C. Wing venation. D. Male tergum VIII. E. Male sternum VIII. Scale bars 1, 0.2, 0.5, 0.2, 0.2 mm, respectively.
FIGURE 1 in Atacamaptilia ambrosiavora gen. et sp. nov. (Lepidoptera: Gracillariidae), a leaf miner of Ambrosia cumanensis (Asteraceae) in the Atacama Desert
FIGURE 1. Neighbor-Joining tree of Atacamaptilia ambrosiavora gen. et sp. nov. and representatives of Acrocercopinae (Gracillariidae) based on COI sequences.
Fig. 2 in Fundicoccus ignavus gen. nov., sp. nov., a novel genus of the family Aerococcaceae isolated from bulk tank milk
Fig. 2. Up-to-date bacterial core gene tree (UBCG) based on a multigene alignment with 92 housekeeping genes. Genome data of type strains of the type species from the family Aerococcaceae available on the EzBioCloud database were used. The three isolates of this study are marked in bold. The tree was calculated based on the Tamura–Nei model using MEGA X software. Two hundred repetitions were performed to reveal statistic support which is shown at branch nodes (bootstrap values>50 %). Lactococcus lactis subsp. lactis was used as an outgroup. Bar, 0.1 substitution per nucleotide position.
Fig. 2 in Halococcoides cellulosivorans gen. nov., sp. nov., an extremely halophilic cellulose-utilizing haloarchaeon from hypersaline lakes
Fig. 2. Phylogeny of strain HArcel1T. (a) Maximum-likelihood 16S rRNA gene sequence-based phylogenetic tree showing the position of strain HArcel1T (in bold) within the order Halobacteriales. Branch lengths (see scale) correspond to the number of substitutions per site with corrections, associated with the model (GTR, G+I, four categories). All positions with less than 95 % site coverage were eliminated. In total, 1435 positions were used in the alignment of 119 sequences. Numbers at nodes indicate bootstrap values of 1000 repetitions, bootstrap values below 50 % are not shown. The genus Halomarina was used as an outgroup. (b) Maximum-likelihood rpoB′ gene sequence-based tree showing the position of strain HArcel1T (in bold) within the order Halobacteriales. All parameters were the same as in 16S rRNA gene-based phylogeny. In total, 1827 positions were used in the alignment of 81 sequences. The genus Halomarina was used as an outgroup. (c) Maximum-likelihood tree based on alignment of 17 ribosomal proteins showing the position of strain HArcel1T (in bold) within the order Halobacteriales. Branch lengths (see scale) correspond to the number of substitutions per site with corrections, associated with the model (LG, G+I, four categories). All positions with less than 95 % site coverage were eliminated. In total, 2938 positions were used in the alignment of 40 amino acid sequences. The genus Natronomonas was used as an outgroup.
Fig. 2 in Lactobacillus suantsaii sp. nov., isolated from suan-tsai, a traditional Taiwanese fermented mustard green
Fig. 2. Phylogenetic tree based on the concatenated housekeeping gene sequences (pheS and rpoA) showing the relationship of Lactobacillus suantsaii sp. nov. L88T with strains of closely related species. The tree was reconstructed by the neighbour-joining method on the basis of a comparison of 1138 bp, and Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293T was used as an outgroup. Bootstrap values based on 1000 replicates are shown at branch nodes for neighbour-joining, maximum-likelihood and minimum-evolution methods, respectively. Bar, 5 % sequence divergence.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.