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150
datasets available to search
ShareScore release 0.9.0
Dataset results
150 results for “5hmC”
An integrated multi-omics approach identifies epigenetic alterations associated with Alzheimer’s disease (5hmC) [5hmC-Seal]
GEO Series GSE159671. Homo sapiens. 28 samples. Type: Methylation profiling by high throughput sequencing.
5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC) increase CREB1 binding to the C/EBP half-site GCAA
GEO Series GSE88897. Mus musculus; synthetic construct. 18 samples. Type: Other.
Single-cell 5hmC sequencing reveals chromosome-wide cell-to-cell variability and enables lineage reconstruction
GEO Series GSE80973. Mus musculus; synthetic construct. 10 samples. Type: Methylation profiling by high throughput sequencing.
JBP1-seq: a fast and efficient method for genome-wide profiling of 5hmC
GEO Series GSE61193. Homo sapiens. 2 samples. Type: Methylation profiling by high throughput sequencing.
5hmC dynamically correlated with enhancer's activities during hES-to-Pancreatic endoderm cell differentiation (CMS)
GEO Series GSE97988. Homo sapiens. 12 samples. Type: Methylation profiling by high throughput sequencing.
RNA-seq, WGBS, 5hmC-Seal, and ATAC-seq data about TET proteins and skeletal development (WGBS)
GEO Series GSE174047. Mus musculus. 2 samples. Type: Methylation profiling by high throughput sequencing.
5-hydroxymethylcytosine (5hmC) profiling of H1 WT hESCs
GEO Series GSE150015. Homo sapiens. 2 samples. Type: Methylation profiling by high throughput sequencing.
Retinoic acid and ascorbate synergize to suppress myeloid leukemia via TET2 activation [U-937 5hmC-seq]
GEO Series GSE273233. Homo sapiens. 12 samples. Type: Methylation profiling by high throughput sequencing.
TET1-mediated DNA hydroxymethylation controlling ferroptosis resistance in cancer [5hmC-seq]
GEO Series GSE240525. Homo sapiens. 6 samples. Type: Other.
Application of a low cost array-based technique - TAB-Array - for quantifying and mapping both 5mC and 5hmC at single base resolution.
GEO Series GSE60225. Homo sapiens. 18 samples. Type: Methylation profiling by genome tiling array.
TDP-43 stable deficiency leads to transcriptional dysregulation and transposable elements activation via global R-loops and 5hmC landscape alteration [RNA-Seq]
GEO Series GSE230408. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Retinoic acid and ascorbate synergize to suppress myeloid leukemia via TET2 activation [MV4-11 5hmC-seq]
GEO Series GSE298862. Homo sapiens. 12 samples. Type: Methylation profiling by high throughput sequencing.
RNA-seq, WGBS, 5hmC-Seal, and ATAC-seq data about TET proteins and skeletal development
GEO Series GSE174048. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Other.
Genome-wide 5mC and 5hmC patterns determine unique transcriptional signatures,regulators and exon inclusion of neural cell types in mouse brain [Nanopore]
GEO Series GSE244251. Mus musculus. 9 samples. Type: Methylation profiling by high throughput sequencing.
Joint single-cell profiling resolves 5mC and 5hmC and reveals their distinct gene regulatory effects [snRNAseq]
GEO Series GSE236769. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
MeDIP analysis of 5mC and 5hmC marks in human ataxia-telangiectasia cerebellum
GEO Series GSE61133. Homo sapiens. 12 samples. Type: Methylation profiling by high throughput sequencing.
TET2 is a component of the ER complex and controls 5mC to 5hmC conversion at ER cis-regulatory regions
GEO Series GSE153255. Homo sapiens. 97 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
RNA-seq, WGBS, 5hmC-Seal, and ATAC-seq data about TET proteins and skeletal development (RNA-Seq)
GEO Series GSE174046. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
TET enzymes augment AID expression via 5hmC modifications at the Aicda superenhancer [ATAC-seq]
GEO Series GSE116203. Mus musculus. 16 samples. Type: Other.
A Prospective Multicenter Clinical Study of SCCG Protocol and ctDNA 5hmc in Predicting the Chemotherapy Sensitivity and Monitoring the Recurrence and Metastasis of Hepatoblastoma in Children and Adole
ClinicalTrials.gov study NCT07300449. IPD Sharing: Not stated. Countries: 1. Publications: 0.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.