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Santa Barbara Channel Marine BON Darwin Core Archive: Nearshore kelp forest integrated quad and swath cover, 1980-ongoing
The Santa Barbara Channel Marine Biodiversity Observation Network (SBCMBON) tracks long-term patterns in species abundance and diversity. This dataset contains counts of algae and invertebrates (both sessile and mobile) by integrating data from four contributing projects working in the kelp forests of the Santa Barbara Channel, USA. The four contributing projects are two research projects: The Santa Barbara Coastal LTER (SBC LTER) and the Partnership for Interdisciplinary Studies of Coastal Oceans (PISCO), the kelp forest monitoring program of the Santa Barbara Channel National Park, and the San Nicolas Island monitoring program supported by USGS. Together, these projects have recorded data for more than 200 species at approximately 100 sites on both the mainland coast and on the Santa Barbara Channel Islands. Sampling began in 1982 and is ongoing. Data were collected by human observation (divers using SCUBA) during regular surveys. The data table documents the number of organisms and the area over which that number was counted for calculation of areal abundance. Data were collected by human observation (divers using SCUBA) during regular surveys. The algae and invertebrate counts record the number of taxa found in each plot, including quad (small square plots such as 1 or 2 m2) and swath (large linear plots such as 60 m2). See Method and protocol for information on integration and data processing. MBON is funded by National Aeronautics and Space Administration (NASA), Bureau of Ocean Energy Management (BOEM), and National Oceanic and Atmospheric Administration (NOAA). This dataset is formatted as a Darwin Core Archive (DwC-A, occurrence core). This is a derived data product and see provenance for the source data. For users who are interested in using all or part of this integrated datasets, please contact data owners to discuss your research interests, data-related issues or any other questions. A recommended citation for the data package is available from the down
SBC LTER: Reef: Kelp Forest Community Dynamics: Fish abundance (Reformatted to a Darwin Core Archive)
This data package is formatted as a Darwin Core Archive (DwC-A, event core). For more information on Darwin Core see https://www.tdwg.org/standards/dwc/. This Level 2 data package was derived from the Level 1 data package found here: https://pasta.lternet.edu/package/metadata/eml/edi/189/2, which was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-sbc/17/35. The abstract below was extracted from the Level 0 data package and is included for context: These data describe the abundance and size of fish species as part of SBCLTER's kelp forest monitoring program to track long-term patterns in species abundance and diversity. This study began in 2000 in the Santa Barbara Channel, California, USA. The abundance and size of all taxa of resident kelp forest fish encountered along permanent transects are recorded at nine reef sites located along the mainland coast of the Santa Barbara Channel and at two sites on the north side of Santa Cruz Island. These sites reflect several oceanographic regimes in the channel and vary in distance from sources of terrestrial runoff. In these surveys, fish were counted in either a 40x2m benthic quadrat, or in the water parcel 0-2m off the bottom over the same area. The two tables in this data package include: 1) The annual benthic fish community survey which was conducted on 11 reefs once a year around late July or early August; and 2) The monthly fish survey which was conducted once a month at a subset of the sites (3 of the annual sites) The time period of data collection for the annual benthic fish community survey varied among the 11 kelp forest sites. Sampling at BULL, CARP, and NAPL began in 2000, sampling at the other 6 mainland sites (AHND, AQUE, IVEE, GOLB, ABUR, MOHK) began in 2001 (transects 3, 5, 6, 7, 8 at IVEE were added in 2011). Data collection at the two Santa Cruz Island sites (SCTW and SCDI) began in 2004. The monthly fish survey at ABUR (Transect 1, 2, and 3), AQUE
Zooplankton density for all samples collected from Toolik Lake and lakes near the Toolik Field Station, Arctic LTER 2003 - 2017 (Reformatted to a Darwin Core Archive)
This data package is formatted as a Darwin Core Archive (DwC-A, event core). For more information on Darwin Core see https://www.tdwg.org/standards/dwc/. This Level 2 data package was derived from the Level 1 data package found here: https://pasta.lternet.edu/package/metadata/eml/edi/262/2, which was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-arc/10272/5. The abstract below was extracted from the Level 0 data package and is included for context: Zooplankton density,were taken with a 30 cm diameter plankton net with 156 um mesh plankton netting, for all samples collected from Toolik Lake and lakes near the Toolik Field Station, Arctic LTER from 2003 - 2017. The Arctic is one of the most rapidly warming regions on Earth. Responses to this warming involve acceleration of processes common to other ecosystems around the world (e.g., shifts in plant community composition) and changes to processes unique to the Arctic (e.g., carbon loss from permafrost thaw). The objectives of the Arctic Long-Term Ecological Research (LTER) Project for 2017-2023 are to use the concepts of biogeochemical and community “openness” and “connectivity” to understand the responses of arctic terrestrial and freshwater ecosystems to climate change and disturbance. These objectives will be met through continued long-term monitoring of changes in undisturbed terrestrial, stream, and lake ecosystems in the vicinity of Toolik Lake, Alaska, observations of the recovery of these ecosystems from natural and imposed disturbances, maintenance of existing long-term experiments, and initiation of new experimental manipulations. Based on these data, carbon and nutrient budgets and indices of species composition will be compiled for each component of the arctic landscape to compare the biogeochemistry and community dynamics of each ecosystem in relation to their responses to climate change and disturbance and to the propagation of those responses ac
Eight Mile Lake Research Watershed, Carbon in Permafrost Experimental Heating and Drying Research (DryPEHR): Peak growing season aboveground biomass 2011-2017. (Reformatted to a Darwin Core Archive)
This data package is formatted as a Darwin Core Archive (DwC-A, event core). For more information on Darwin Core see https://www.tdwg.org/standards/dwc/. This Level 2 data package was derived from the Level 1 data package found here: https://pasta.lternet.edu/package/metadata/eml/edi/264/3, which was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-bnz/502/16. The abstract below was extracted from the Level 0 data package and is included for context: This drying and warming experiment addresses the following questions: 1) Does ecosystem drying, warming and permafrost thaw cause a net release or uptake of C from the ecosystem to the atmosphere?, 2) Does the decomposition of old C that comprises the bulk of the soil C pool influence ecosystem C loss? 3) How do drying and warmign affect plant communities and ecosystem properties? We are answering these questions using a combined warming and drying experiment (DryPEHR), which is situated with the Carbon in Permafrost Experimental Heating Research (CiPEHR) project and located in an upland tundra field site near Healy, Alaska in the foothills of the Alaska Range. Warming treatment here refers to growing season air temperature warming (~1C) using open top chambers (OTC) combined with soil 'warming' using snow fences during the snow covered months. Drying is achieve using an automated pumping system that lowers the water table in the dry plots. Soil warming began in 2008; OTCs and drying in 2011. Above ground plant biomass was surveyed non-destructively using a point-intercept method for all vascular and moss species at peak growing season.
Bonanza Creek LTER: Shrub, Seedling and Sapling Density from 1975 to Present in the Bonanza Creek Experimental Forest near Fairbanks, Alaska (Reformatted to a Darwin Core Archive)
This data package is formatted as a Darwin Core Archive (DwC-A, event core). For more information on Darwin Core see https://www.tdwg.org/standards/dwc/. This Level 2 data package was derived from the Level 1 data package found here: https://pasta.lternet.edu/package/metadata/eml/edi/320/2, which was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-bnz/530/11. The abstract below was extracted from the Level 0 data package and is included for context: This study is a survey of the density of tall shrubs, saplings, and seedlings at Bonanza Creek LTER Control Plots. Densities have been measured at some sites since 1975 while others began in the mid 1980's. In 2006 methodology was changed in attempt to better capture the spatial variability of shrub and tree species within the research sites. The current method, presented here, uses a 2 meter wide transect along two site boundaries covering 220m2. All seedlings, saplings, and tall shrubs >1m (regardless of species) are counted by species and size class along the transect. The previous method used 4m2 circular plots at 20 points on a 10mx10m grid within the control plot for an area of 80m2. The circular method measured all seedlings, saplings, and a certain set of "tall shrubs", regardless of height. The height requirement creates an issue when comparing the old and new methods for early successional stands. For Alnus and Salix this is likely only a problem in the FP0 sites as they are the only sites with a high density of shrubs shorter than 1m. Shrub community changes at these early successional sites should be analyzed using percent cover data. At the later successional sites most Alnus and Salix shrubs are greater than 1m so the transect method likely does not underrepresent density. The metadata and raw data from the circular method can be found in <a href="http://www.lter.uaf.edu/data/data-detail/id/175"> Vegetation Plots of the Bonanza Creek LTER Control Plo
PIE LTER surveys of salt marsh breeding birds using point counts in Rowley and Newbury, Massachusetts (Reformatted to a Darwin Core Archive)
This data package is formatted as a Darwin Core Archive (DwC-A, event core). For more information on Darwin Core see https://www.tdwg.org/standards/dwc/. This Level 2 data package was derived from the Level 1 data package found here: https://pasta.lternet.edu/package/metadata/eml/edi/336/2, which was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-pie/175/8. The abstract below was extracted from the Level 0 data package and is included for context: This data set contains the results of point count surveys of breeding birds in the salt marshes of the Plum Island Estuary. Surveys have been carried out each year in June beginning in 2004 and are ongoing. Currently six circles of 100 m radius are being surveyed. Three of the circles are in plots that had been regularly hayed and three in unhayed plots. Currently only one of the plots is regularly hayed. 85 species recorded as of 2020. Most frequently encountered are Agelaius phoeniceus, Ammospiza caudacuta, Tringa semipalmata. The Plum Island Ecosystems (PIE) LTER is developing a predictive understanding of the response of a linked watershed-marsh-estuarine system in northeastern Massachusetts to rapid environmental change. Over the last 30 years, surface sea water temperatures in the adjacent Gulf of Maine have risen at 3 times the global average, rates of sea-level rise have accelerated, and precipitation has increased. Coupled with these changes in climate and sea level are substantial changes within the rapidly urbanizing watersheds that influence water, sediment, and nutrient delivery to the marsh and estuary. In PIE IV our focus is on: Dynamics of coastal ecosystems in a region of rapid climate change, sea-level rise, and human impacts. NSF OCE LTER-Plum Island Ecosystems: Dynamics of coastal ecosystems in a region of rapid climate change, sea-level rise, and human impacts.
Dune Biomass on Hog Island, Virginia Coastal Barrier Islands, 1993-2012 (Reformatted to a Darwin Core Archive)
This data package is formatted as a Darwin Core Archive (DwC-A, event core). For more information on Darwin Core see https://www.tdwg.org/standards/dwc/. This Level 2 data package was derived from the Level 1 data package found here: https://pasta.lternet.edu/package/metadata/eml/edi/323/2, which was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-vcr/70/25. The abstract below was extracted from the Level 0 data package and is included for context:
Annual heron counts on Chincoteague Island, Virginia 1992-2011 (Reformatted to a Darwin Core Archive)
This data package is formatted as a Darwin Core Archive (DwC-A, event core). For more information on Darwin Core see https://www.tdwg.org/standards/dwc/. This Level 2 data package was derived from the Level 1 data package found here: https://pasta.lternet.edu/package/metadata/eml/edi/324/3, which was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-vcr/166/17. The abstract below was extracted from the Level 0 data package and is included for context: This dataset has the number of breeding pairs of herons nesting on Chincoteague, VA region.This data is also available from the Center for Conservation Biology at the College of William and Mary as part of the Virginia Coastal Avian Partnership (VCAP).
Valleywide Bird Survey, Hubbard Brook Experimental Forest, 1999-2016 (ongoing) (Reformatted to a Darwin Core Archive)
This data package is formatted as a Darwin Core Archive (DwC-A, event core). For more information on Darwin Core see https://www.tdwg.org/standards/dwc/. This Level 2 data package was derived from the Level 1 data package found here: https://pasta.lternet.edu/package/metadata/eml/edi/348/2, which was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-hbr/178/3. The abstract below was extracted from the Level 0 data package and is included for context: This data set includes bird point-count data collected during the breeding seasons (May-July) of 1999-2016 at 373 locations throughout Hubbard Brook Experimental Forest. These data were gathered as part of the Hubbard Brook Ecosystem Study (HBES). The HBES is a collaborative effort at the Hubbard Brook Experimental Forest, which is operated and maintained by the USDA Forest Service, Northern Research Station.
Ground Arthropod Community Survey in Grassland, Shrubland, and Woodland at the Sevilleta National Wildlife Refuge, New Mexico (1992-2004) (Reformatted to a Darwin Core Archive)
This data package is formatted as a Darwin Core Archive (DwC-A, event core). For more information on Darwin Core see https://www.tdwg.org/standards/dwc/. This Level 2 data package was derived from the Level 1 data package found here: https://pasta.lternet.edu/package/metadata/eml/edi/333/2, which was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-sev/29/175390. The abstract below was extracted from the Level 0 data package and is included for context: This data set contains records for the numbers of selected groups of ground-dwelling arthropod species and individuals collected from pitfall traps at 4 sites on the Sevilleta NWR, including creotostebush shrubland, both black and blue grama grasslands, and a pinyon/juniper woodland. Data collections begin in May of 1989, and are represented by subsequent sample collections every 2 months. One site (Goat Draw/Cerro Montosa) was discontinued in 2001, and a new site (Blue Grama) was initiated . Only three sites, creosotebush, black grama, and blue grama were continued between 2001-2004.
SBC LTER: Reef: Long-term experiment: biomass of kelp forest species, ongoing since 2008 (Reformatted to a Darwin Core Archive)
This data package is formatted as a Darwin Core Archive (DwC-A, event core). For more information on Darwin Core see https://www.tdwg.org/standards/dwc/. This Level 2 data package was derived from the Level 1 data package found here: https://pasta.lternet.edu/package/metadata/eml/edi/278/3, which was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-sbc/119/7. The abstract below was extracted from the Level 0 data package and is included for context: These data represent values of biomass density for more than 200 species of macroalgae, invertebrates and fish measured in fixed plots at five reefs as part of a long-term experiment designed to evaluate the effects of disturbance to giant kelp on the structure and productivity of the benthic community. Taxon-specific relationships between size and mass were applied to field measurements of species abundance to estimate biomass density of each species. The five reefs (Arroyo Quemado 34°28.048’N, 120°07.031’W; Carpinteria 34°23.474’N, 119°32.510’W; Isla Vista 34°23.275’N, 119°32.792’W; Mohawk 34°23.649’N, 119°43.762’W; and Naples 34° 25.342’N, 119° 57.102’W) ranged in depth from 5.8 m to 8.9 m (MLLW) and were chosen to represent a range of physical and biological characteristics known to influence subtidal macroalgal assemblages in the region. A common (but not always persistent) feature on these reefs was the presence of the giant kelp, which forms a dense canopy at the sea surface that suppresses recruitment and growth of understory algae below it. See Methods for more information. The primary research objective of the Santa Barbara Coastal LTER is to investigate the importance of land and ocean processes in structuring giant kelp (Macrocystis pyrifera ) forest ecosystems. As in many temperate regions, the shallow rocky reefs in the Santa Barbara Channel, California, are dominated by giant kelp forests. Because of their close proximity to shore, kelp forests are i
California Harmful Algal Bloom Monitoring and Alert Program Data (Darwin Core Archive format)
The Harmful Algal Bloom Monitoring and Alert Program (HABMAP) was formed in 2008 and provides updates on current algal blooms and facilitates information exchange among scientists, federal and state managers, and the general public in California. A major component of this program is regional HAB monitoring with support from the Southern California Coastal Ocean Observing System (SCCOOS) and the Central and Northern California Ocean Observing System (CeNCOOS). Water samples and net tows are collected once per week at piers to monitor for HAB species, the neurotoxin domoic acid, and water quality data including temperature, chlorophyll-a, and nutrients. The sampling stations represented in this dataset include Santa Cruz Wharf, Monterey Wharf, Cal Poly Pier, Stearns Wharf, Santa Monica Pier, Newport Beach Pier, and Scripps Pier. These data are consolidated and reformatted into Darwin Core Archive (DwC-A) format from the level 1 site-specific datasets hosted on the SCCOOS ERDDAP server: (https://erddap.sccoos.org/erddap/tabledap/index.html?page=1).
Catalog of GenBank sequence read archive (SRA) entries of 16S and 18S rRNA genes from bacterial and protistan planktonic communities along the Eastern Beaufort Sea coast, North Slope, Alaska, 2011-2013
Microbial communities in the coastal Arctic Ocean experience extreme variability in organic matter and inorganic nutrients driven by seasonal shifts in sea ice extent and freshwater inputs. Lagoons border more than half of the Beaufort Sea coast and provide important habitats for migratory fish and seabirds; yet, little is known about the planktonic food webs supporting these higher trophic levels. To investigate seasonal changes in bacterial and protistan planktonic communities, amplicon sequences of 16S and 18S rRNA genes were generated from samples collected during periods of ice-cover (April), ice break-up (June), and open water (August) from shallow lagoons along the eastern Alaska Beaufort Sea coast from 2011 through 2013. This data package catalogs sequence read archive (SRA) entries available through GenBank BioProject PRJNA530074 at https://www.ncbi.nlm.nih.gov/bioproject/PRJNA530074. This data package is associated with the following publication: Kellogg CTE, McClelland JW, Dunton KH and Crump BC (2019) Strong Seasonality in Arctic Estuarine Microbial Food Webs. Front. Microbiol. 10:2628. doi: 10.3389/fmicb.2019.02628 Environmental variables (physiochemical data from YSI and HOBO data loggers, as well as organic matter analysis and stable isotope data from discrete water samples) associated with this genomic dataset are available from the Arctic Data Center: Kenneth Dunton, Byron Crump, and James McClelland. Physical, chemical, and biological data from lagoons and open coastal waters in the nearshore environment of the eastern Alaska Beaufort Sea, 2011-2013. Arctic Data Center. doi:10.18739/A2DG13. To join the two datasets together, please use the provided site codes (column "site_name" here) and collection dates (column "collection_date" here) in each dataset. Note that the site codes in this package are without hyphens (e.g. JAA) while site codes in the above environmental data package have hyphens (e.g. JA-A). Instead of citing this package which is jus
Catalog of GenBank sequence read archive (SRA) entries of metagenomic DNA sequence analyses of bacterial and archaeal water column communities along the Eastern Beaufort Sea coast, North Slope, Alaska, 2012
In contrast to temperate systems, Arctic lagoons that span the Alaska Beaufort Sea coast face extreme seasonality. Nine months of ice cover up to ∼1.7 m thick is followed by a spring thaw that introduces an enormous pulse of freshwater, nutrients, and organic matter into these lagoons over a relatively brief 2–3 week period. Prokaryotic communities link these subsidies to lagoon food webs through nutrient uptake, heterotrophic production, and other biogeochemical processes, but little is known about how the genomic capabilities of these communities respond to seasonal variability. This study characterizes the metabolic capabilities of microbial communities across three seasons in two lagoons and one open coastal site along the eastern Alaska Beaufort Sea coast. We used metagenomic DNA sequence data of bacterial and archaeal water column communities to identify genes of relevant biogeochemical pathways. This data package catalogs sequence read archive (SRA) entries available through GenBank BioProject PRJNA642637 at https://www.ncbi.nlm.nih.gov/bioproject/PRJNA642637. This data package is associated with the following publication: Baker, Kristina D., Colleen T. E. Kellogg, James W. McClelland, Kenneth H. Dunton, and Byron C. Crump. “The Genomic Capabilities of Microbial Communities Track Seasonal Variation in Environmental Conditions of Arctic Lagoons.” Frontiers in Microbiology 12 (2021). https://doi.org/10.3389/fmicb.2021.601901. Environmental variables (physiochemical data from YSI and HOBO data loggers, as well as organic matter analysis and stable isotope data from discrete water samples) associated with this genomic dataset are available from the Arctic Data Center: Kenneth Dunton, Byron Crump, and James McClelland. Physical, chemical, and biological data from lagoons and open coastal waters in the nearshore environment of the eastern Alaska Beaufort Sea, 2011-2013. Arctic Data Center. doi:10.18739/A2DG13. To join the two datasets together, please use the provi
SIC01 Isotopic composition of select archived soil cores from Konza Prairie
The concentration and isotopic composition of soil carbon and nitrogen were measured from select archived soil cores originally collected for the NSC01 dataset using an isotope ratio mass spectrometer coupled with an elemental analyzer. These soil cores were collected from the lowlands (25 cm depth) of four experimental watersheds in 1982, 1987, 2002, 2010, and 2015. The four experimental watersheds are 001d, n01b, 020b, and n20b.
Microbial Observatory at North Temperate Lakes LTER High-resolution temporal and spatial dynamics of microbial community structure in freshwater bog lakes 2005 - 2009 original format (Reformatted to a Darwin Core Archive)
This data package is formatted as a Darwin Core Archive (DwC-A, event core). For more information on Darwin Core see https://www.tdwg.org/standards/dwc/. This Level 2 data package was derived from the Level 1 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-ntl/344/6, which was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-ntl/349/4. The abstract below was extracted from the Level 0 data package and is included for context: The North Temperate Lakes - Microbial Observatory seeks to study freshwater microbes over long time scales (10+ years). Observing microbial communities over multiple years using DNA sequencing allows in-depth assessment of diversity, variability, gene content, and seasonal/annual drivers of community composition. Combining information obtained from DNA sequencing with additional experiments, such as investigating the biochemical properties of specific compounds, gene expression, or nutrient concentrations, provides insight into the functions of microbial taxa. Our 16S rRNA gene amplicon datasets were collected from bog lakes in Vilas County, WI, and from Lake Mendota in Madison, WI. Ribosomal RNA gene amplicon sequencing of freshwater environmental DNA was performed on samples from Crystal Bog, North Sparkling Bog, West Sparkling Bog, Trout Bog, South Sparkling Bog, Hell’s Kitchen, and Mary Lake. These microbial time series are valuable both for microbial ecologists seeking to understand the properties of microbial communities and for ecologists seeking to better understand how microbes contribute to ecosystem functioning in freshwater.
Mean - Variance Experiment sample archives
We designed novel field experimental infrastructure to resolve the relative importance and interactions among changes in precipitation mean and variance in regulating the structure and function of dryland populations, communities, and ecosystem processes. The Mean x Variance Experiment (MVE) adds three novel elements to prior designs (Gherardi & Sala 2013) that have manipulated interannual variance in climate in the field by (i) determining interactive effects of mean and variance in a factorial design that crosses a drier mean with increased (more) variance, (ii) studying multiple dryland ecosystem types to compare their susceptibility to transition under interactive climate drivers, and (iii) adding stochasticity to our treatments to permit the antecedent effects that occur under natural climate variability. This new infrastructure enables direct experimental tests of the hypothesis that interactions between the mean and variance of precipitation will have larger ecological impacts than either the mean or variance in precipitation alone. We collected samples of soils, biological soil crusts, leaves of the foundation plant species, and roots of the two dominant grass species each year during peak productivity (September-October). These samples enable us to address the question: How do interactions between the mean and variance of precipitation alter the biogeochemistry and microbiomes of plants and soils. This data package includes accession numbers for all samples collected from the Mean x Variance Experiment at the Sevilleta National Wildlife Refuge, Socorro, NM.
Sri Ksetra (HMA) Digitised Paper Archive (Version 1)
<p>This is the current version of a digitised excavation archive, deriving from archaeological investigations at Sri Ksetra (HMA) in Burma (Myanmar) carried out 2014-16. It comprises: excavation records, artefact illustrations, section drawings, plans, maps, artefact data, sample data, field notes and accompanying indexes. </p>
Webis-Web-Archive-17
<p>The Webis-Web-Archive-17 comprises a total of 10,000 web page archives from mid-2017 that were carefully sampled from the Common Crawl to involve a mixture of high-ranking and low-ranking web pages. The dataset contains the web archive files, HTML DOM, and screenshots of each web page, as well as per-page annotations of visual web archive quality. See <a href="https://webis.de/data.html?q=tags%3Awebis-web-archive-17">this overview</a> for all datasets that built upon this one. If you use this dataset in your research, please cite it using <a href="https://webis.de/publications.html?q=10.1145%2F3239574">this paper</a>.</p>
AgMIP's global gridded crop model intercomparison (GGCMI) phase II CTWN-A archive: priority 1 outputs from LPJmL soybean simulations
<p>This data set contains output data from simulations with the model LPJmL for soybean as part of AgMIP's Global Gridded Crop Model Intercomparison (GGCMI) phase II output data set. Output variables included are: crop yield, above-ground biomass, plant day, maturity day, potential irrigation water withdrawal, actual growing season evapotranspiration . Simulations are based on 31-year simulations using the AgMERRA data set with 4 atmospheric CO2 mixing ratios (C=360, 510, 660, 810 ppm) uniform offsets for temperature (T= -1, 0, 1, 2, 3, 4, 6 K), water (W= -50, -30, -20, -10, 0, 10, 20, 30 %, and infinite/irrigated), and 3 nitrogen input levels (N= 10, 60, 200 kgN/ha) using 2 assumptions on adaptation (A= 'none', 'regain original growing season').</p> <p>Version 2 of these files has been corrected with respect to the temporal sequence of results, which is not important if looking at 30-year averages as in Franke et al. 2020, but becomes relevant if looking at individual years.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.