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104 results for “Earth System Modeling”
Demo-Dataset for publication "FAIR workflows in Earth system modelling: a use case with semantic data management"
<p>This demodataset is intended to be used to test the workflow described in the publication by Lennartz & Schlemmer "FAIR workflows in Earth System modelling: a use case with semantic data management". It contains example model output for an arbitrary biogeochemical model tracer (here: dissolved organic carbon, DOC) from an ocean model as a 4-dimensional dataset (latitude, longitude, depth, time), the corresponding grid point locations as well as a textfile specifying parameter inputs for the model. The file structure is adapted for seamless integration into the workflow described in Lennartz & Schlemmer, which builds on the open source semantic research data management system LinkAhead. The dataset contains the following structure: The folder DataAnalysis stores data required for data analysis, such as the grid point locations in the file TMM_grid_v2018a.mat. The folder SimulationData stores model output in the folder 2022_TMM, containing the parameter input file nl_in.txt and the model output TR_monthly.mat. Related instructions can be accessed here: https://gitlab.com/salexan/fairworkflows-demodataset .</p>
Dataset for manuscript "Gaps in our understanding of ice-nucleating particle sources exposed by global simulation of the UK Earth System Model"
<p>Datasets and Jupyterlab python script for plotting all figures relevant to the mansucript "Gaps in our understanding of ice-nucleating particle sources exposed by global simulation of the UK Earth System Model" by Herbert et al.</p> <p>https://egusphere.copernicus.org/preprints/2024/egusphere-2024-1538/</p> <p>Data needs to be unzipped and paths (input and output) updated in the jupyterlab python script.</p> <p> </p>
Earth System Model-based Life Cycle Assessment of Ocean Alkalinity Enhancement
<ol> <li>“Fig2data.xlsx”, “Fig5data.xlsx” and “Fig4data.xlsx” are the original data to create Fig.2, Fig.3 and Fig.5. The data are calculated from UVic results.</li> <li>“Fig4.txt” is the code to create Fig.4 by Pyferret from UVic results.</li> <li>“X.f” are the update codes in our UVic model.</li> </ol>
An Assessment of Nonhydrostatic and Hydrostatic Dynamical Cores at Seasonal Time Scales in the Energy Exascale Earth System Model (E3SMv1)
<p>This is the companion data for the manuscript of the same title, submitted to Journal of Advances in Modeling Earth Systems on 09/03/2021. </p> <p><strong>summer: </strong>this folder contains part of the model outputs I ran on NERSC Cori in 2020-2021 corresponding to the summer simulations in the manuscript.</p> <p><strong>winter: </strong>this folder contains part of the outputs I ran on NERSC Cori in 2020-2021 corresponding to the winter simulations in the manuscript.</p> <p><strong>ne256: </strong>this folder contains part of the outputs I ran on NERSC Cori in 2021 corresponding to the ne256 simulations in the manuscript.</p> <p><strong>bubble</strong>: this folder includes the namelists used in the rising bubble experiments.</p> <p><strong>script: </strong>this folder includes an example of a script to generate the realistic SCREAM simulation </p> <p> </p> <p>Unfortunately, model outputs are too large (~ 30 TB). Therefore, I only provide mean data, used directly to generate figures, in this repository. All model output are archived on tape at NERSC. </p> <p>For more details, refer to the manuscript, or contact me (wrliu@ucdavis.edu). </p>
Shortwave radiation budget under Arctic Sea ice in Earth System models
<p>Contains data and scripts of the study " Improving the representation of shortwave radiation budget under Arctic Sea ice in Earth System models using observations", submitted to Journal of Geophysical Research - Oceans. </p>
Model data and code supporting "Updated Isoprene and Terpene Emission Factors for the Interactive BVOC Emission Scheme (iBVOC) in the United Kingdom Earth System Model (UKESM1.0) "
<p>Model data and analysis code supporting the Geoscientific Model Development manuscript "Updated Isoprene and Terpene Emission Factors for the Interactive BVOC Emission Scheme (iBVOC) in the United Kingdom Earth System Model (UKESM1.0) "</p> <p> </p> <p> </p>
Data for: Improvements in the Land and Crop Modeling over Flooded Rice Fields by Incorporating the Shallow Paddy Water (Submitting to the Journal of Advances in Modeling Earth Systems)
<p>We incorporated the shallow paddy surface water layer into the Noah-MP land surface model to improve its performance of surface heat fluxes over flooded rice paddies. Field measurements from two crop sites, i.e., SAITO (early rice) and SAGA (late rice), were used to initialize and evaluate the modified Noah-MP model (Maruyama, 2021). Additionally, we investigated the roles of some key parameters in the land and crop modeling. </p> <p>Note that, all numerical experiments in this study were conducted at the field scale using the offline version of Noah-MP (Niu et al., 2011) running within the High-Resolution Land Data Assimilation System (HRLDAS v3.9; Chen et al., 2007). Please refer to the official HRLDAS/Noah-MP unified Github repository (<a href="https://github.com/NCAR/hrldas">https://github.com/NCAR/hrldas-release</a>) for the original model codes.</p> <p>The related model code modifications and model outputs were included in this dataset. Surface observations for the nearest AMeDAS or meteorological observatory stations were obtained from the Japan Meteorological Agency website (<a href="https://www.jma.go.jp/jma/indexe.html">https://www.jma.go.jp/jma/indexe.html</a>), and were also provided in this dataset.</p> <p> </p> <p>References</p> <p>Chen, F., Manning, K. W., LeMone, M. A., Trier, S. B., Alfieri, J. G., Roberts, R. D., et al. (2007). Description and evaluation of the characteristics of the NCAR high‐resolution land data assimilation system. <em>Journal of Applied Meteorology and Climatology</em>, 46(6), 694-713. <a href="https://doi.org/10.1175/JAM2463.1">https://doi.org/10.1175/JAM2463.1</a></p> <p>Maruyama, A. (2021). Data for: Coupling land surface and crop models to estimate the effects of changes in the growing season on energy balance and water use of rice paddies (version 2) [Data set]. Mendeley Data. <a href="https://doi.org/10.17632/tv23z95r5g.2">https://doi.org/10.17632/tv23z95r5g.2</a></p> <p>Niu, G., Yang, Z., Mitchell, K., Chen, F., Ek, M., Barlage, M., et al. (2011). The community Noah land surface model with multiparameterization options (Noah‐MP): 1. Model description and evaluation with local‐scale measurements. <em>Journal of Geophysical Research, </em>116, D12109. <a href="https://doi.org/10.1029/2010JD015139">https://doi.org/10.1029/2010JD015139</a></p>
High resolution downscaling of CMIP6 Earth System and Global Climate Models using deep learning for Iberia Part 8
<p>Future projections of precipitation by the BM10 model forced by the seven GCMs used in the GMD paper "High resolution downscaling of CMIP6 Earth System and Global Climate Models using deep learning for Iberia".</p>
High resolution downscaling of CMIP6 Earth System and Global Climate Models using deep learning for Iberia Part 5
<p>Future projections of precipitation by the BM1 model forced by the seven GCMs used in the GMD paper "High resolution downscaling of CMIP6 Earth System and Global Climate Models using deep learning for Iberia".</p>
High resolution downscaling of CMIP6 Earth System and Global Climate Models using deep learning for Iberia Part 3
<p>Future projections of 2-meter minimum temperature by the CNN models (BM1, BM10 and BMdense) forced by the seven GCMs used in the GMD paper "High resolution downscaling of CMIP6 Earth System and Global Climate Models using deep learning for Iberia".</p>
High resolution downscaling of CMIP6 Earth System and Global Climate Models using deep learning for Iberia Part 2
<p>Future projections of 2-meter maximum temperature by the CNN models (BM1, BM10 and BMdense) forced by the seven GCMs used in the GMD paper "High resolution downscaling of CMIP6 Earth System and Global Climate Models using deep learning for Iberia".</p>
High resolution downscaling of CMIP6 Earth System and Global Climate Models using deep learning for Iberia Part 11
<p>Future projections of 2-meter maximum, mean and minimum temperatures by the BMlinear model forced by the seven GCMs used in the GMD paper "High resolution downscaling of CMIP6 Earth System and Global Climate Models using deep learning for Iberia".</p>
High resolution downscaling of CMIP6 Earth System and Global Climate Models using deep learning for Iberia Part 1
<p>Input data (ERA5 and the seven GCMs) used to train the CNN models (BMlinear, BM1, BM10 and BMdense) used in the GMD paper "High resolution downscaling of CMIP6 Earth System and Global Climate Models using deep learning for Iberia".</p>
High resolution downscaling of CMIP6 Earth System and Global Climate Models using deep learning for Iberia Part 9
<p>Historical projections of all predictands (2-meter maximum, mean and minimum temperatures, and precipitation) by all CNN models (BMlinear, BM1, BM10, BMdense) forced by the seven GCMs used in the GMD paper "High resolution downscaling of CMIP6 Earth System and Global Climate Models using deep learning for Iberia". Each CNN model architecture is available in the file "model.json" and its optimized weights for each case are available in the file "model_weights.h5".</p>
High resolution downscaling of CMIP6 Earth System and Global Climate Models using deep learning for Iberia Part 7
<p>Future projections of precipitation by the BMdense model forced by the seven GCMs used in the GMD paper "High resolution downscaling of CMIP6 Earth System and Global Climate Models using deep learning for Iberia".</p>
Community Earth System Model (CESM) simulations disentangling CO2 effects - FULL (1 of 4)
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Community Earth System Model (CESM) simulations disentangling CO2 effects - RAD (3 of 4)
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Manipulations of albedo and mortality of upper canopy leaves in a tropical forest diverge from Earth System model results
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Community Earth System Model (CESM) simulations disentangling CO2 effects - PHYS (2 of 4)
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Community Earth System Model (CESM) simulations disentangling CO2 effects - PI (4 of 4)
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.