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Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
206
datasets available to search
ShareScore release 0.9.0
Dataset results
206 results for “FFPE”
RNA-seq performed on FFPE sarcoma blocks
GEO Series GSE71120. Homo sapiens. 41 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing of breast cancer cells from fresh fixed (FF) and formalin-fixed paraffin-embedded (FFPE) tissue identified multi-ciliary cells
GEO Series GSE278793. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
A cross-comparison of technologies for the detection of microRNAs from FFPE samples of hepatoblastoma patients [NanoString]
GEO Series GSE62017. Homo sapiens. 12 samples. Type: Non-coding RNA profiling by array.
Molecular characterization of Quebec Cohort of Primary Breast Cancer FFPE Tissues on the Human Cancer Panel
GEO Series GSE17650. Homo sapiens. 177 samples. Type: Expression profiling by array.
Global gene expression analysis of formalin-fixed paraffin-embedded (FFPE), furan-exposed mouse liver using one-colour Agilent microarrays
GEO Series GSE62840. Mus musculus. 50 samples. Type: Expression profiling by array.
Expression profiling of formalin-fixed, paraffin-embedded (FFPE) breast cancer metastases of the lymph node and autopsy tissues [DASL HT-12 samples]
GEO Series GSE32488. Homo sapiens. 48 samples. Type: Expression profiling by array.
Methylation profiling of Glioma Stem Cell lines vs GBM FFPE tissue biopsies and foetal Neural Stem Cell lines
GEO Series GSE41824. Homo sapiens. 6 samples. Type: Methylation profiling by genome tiling array.
Brain Metastasis Prediction by DASL Transcriptomic Profiling in Triple Negative Breast Cancer based on FFPE samples
GEO Series GSE76714. Homo sapiens. 71 samples. Type: Expression profiling by array.
snPATHO-seq: unlocking the FFPE archives for single nucleus RNA profiling [snRNA-seq]
GEO Series GSE268426. Homo sapiens. 37 samples. Type: Expression profiling by high throughput sequencing.
Next-generation RNA sequencing of FFPE subsections reveals highly conserved stromal reprogramming between canine and human mammary carcinoma
GEO Series GSE135183. Canis lupus familiaris. 30 samples. Type: Expression profiling by high throughput sequencing.
Array comparative genomic hybridization (aCGH) study of formalin-fixed paraffin-embedded (FFPE) small gastrointestinal stromal tumors (GISTs) less than 1 cm in greatest diameter (microGISTs)
GEO Series GSE28469. Homo sapiens. 21 samples. Type: Genome variation profiling by genome tiling array.
Transcriptomics of FFPE-derived primary brain tumours
GEO Series GSE272042. Homo sapiens. 153 samples. Type: Expression profiling by high throughput sequencing.
Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - CosMx Data
GEO Series GSE308146. Homo sapiens. 4 samples. Type: Other.
Molecular classification of mature aggressive B cell lymphoma using digital multiplexed gene expression on formalin-fixed paraffin-embedded biopsy specimens [FFPE]
GEO Series GSE48182. Homo sapiens. 40 samples. Type: Expression profiling by array.
Transcriptome-wide gene expression analysis of Formalin-Fixed Paraffin-Embedded (FFPE) biopsies of prostate cancer (PCa)
GEO Series GSE220095. Homo sapiens. 176 samples. Type: Expression profiling by high throughput sequencing.
Three commercial array platforms compared for DNA copy number detection with DNA isolated from FFPE tissue [Agilent]
GEO Series GSE30121. Homo sapiens. 11 samples. Type: Genome variation profiling by genome tiling array.
Microarray analysis of microRNAs in NPC FFPE tissue samples
GEO Series GSE46172. Homo sapiens. 8 samples. Type: Non-coding RNA profiling by array.
Affymetrix OncoScan FFPE Array array data from Li-Fraumeni Syndrome tumors
GEO Series GSE64293. Homo sapiens. 5 samples. Type: Genome variation profiling by SNP array.
Gene Expression Profiling of Chronically Inflamed FFPE Placental Tissue
GEO Series GSE68474. Homo sapiens. 11 samples. Type: Expression profiling by array.
Gene expression profiling of FFPE breast cancer samples [Illumina DASL WG platform]
GEO Series GSE51451. Homo sapiens. 12 samples. Type: Expression profiling by array.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.