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47 results for “Galaxy Training Material”
Trajectory Analysis using Monocle3 - Galaxy Training Material
<p>Input datasets for the trajectory analysis tutorial from the case study series.<br> https://training.galaxyproject.org/training-material/topics/transcriptomics/ </p>
Calculating α and β diversity from microbiome taxonomic data - Galaxy Training Material
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STOC population trend - Galaxy training material
<p>Galaxy training material example file</p> <p>https://galaxyproject.github.io/training-material/</p> <p> </p>
Trajectory Analysis: Monocle3 in RStudio - Galaxy Training Material
<p>The input dataset for the trajectory analysis tutorial using Monocle3 in RStudio, which is a follow-up to the case study tutorials that can be found on the <a href="https://training.galaxyproject.org/training-material/topics/single-cell/">Galaxy Training Network</a>.</p>
Seurat object input file - Galaxy Training Material
<p>A Seurat input file for conversion to AnnData.</p>
Training material for Galaxy 101 tutorial
<p>The data provided here are part of a Galaxy tutorial "Galaxy 101". The files contain BED-formatted 1) coding exons on chromosome 22 of human genome version hg38, 2) SNPs from dbSNP version 153 located in whole genes, and 3) repeats from hg38 chr22.</p>
Metagenomic assembly (Galaxy Training Material)
<p>The tutorial aims to train how to perform assembly of metagenomic samples. (https://training.galaxyproject.org/training-material/)</p>
ScienceDex guides
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.