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Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
46
datasets available to search
ShareScore release 0.9.0
Dataset results
46 results for “Microbial colonization”
Organic vegetable juice supplement modulates microbial community in continuous colon simulation system
GEO Series GSE171609. feces metagenome. 36 samples. Type: Other.
Microbial-Derived Metabolites Regulate the Colonic Crypt Niche
GEO Series GSE74601. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Absence of gut microbial colonization attenuates the sympathoadrenal response to hypoglycemia in mice
GEO Series GSE122754. Mus musculus. 12 samples. Type: Expression profiling by array.
Competitive colonization of Akkermansia muciniphila clades by microbial extracellular vesicles through direct inhibition and immune stimulation
GEO Series GSE242518. Akkermansia muciniphila. 6 samples. Type: Expression profiling by high throughput sequencing.
The effects from DNA extraction methods on the evaluation of microbial diversity associated with human colonic tissue
GEO Series GSE18420. human gut metagenome; Archaea; Bacteria. 12 samples. Type: Expression profiling by array.
N-Glycosylated Intestinal Protein BCF-1 Shapes Microbial Colonization by Binding Bacteria via its Fimbrial Protein
GEO Series GSE221568. Caenorhabditis elegans. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.