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Fig. 6 Ixodes barkeri Barker, 2019 in Description of the female, nymph and larva and mitochondrial genome, and redescription of the male of Ixodes barkeri Barker, 2019 (Acari: Ixodidae), from the short-beaked echidna, Tachyglossus aculeatus, with a consideration of the most suitable subgenus for this tick
Fig. 6 Ixodes barkeri Barker, 2019, scanning electron micrographs of nymph. A Scutum. B Spiracular plate (arrows show orientation of spiracular plate: a, anterior; d, dorsal). C Gnathosoma, dorsal view. D Gnathosoma, ventral view. E Gnathosoma, anteroventral view. F Coxae. Scale bars: A, C–F, 0.1 mm; B, 0.05 mm
Fig. 5 Ixodes barkeri Barker, 2019 in Description of the female, nymph and larva and mitochondrial genome, and redescription of the male of Ixodes barkeri Barker, 2019 (Acari: Ixodidae), from the short-beaked echidna, Tachyglossus aculeatus, with a consideration of the most suitable subgenus for this tick
Fig. 5 Ixodes barkeri Barker, 2019, scanning electron micrographs of female. A Spiracular plate (arrows show orientation of spiracular plate: a, anterior; d, dorsal). B Gnathosoma, dorsal view. C Gnathosoma, ventral view (I, palpal article 1; II, palpal article 2; ss the strongly salient part of palpal article 1). D Gnathosoma, anteroventral view. E Coxae. F Trochanter I, dorsal view. Scale bars: A, F, 0.1 mm; B–E, 0.2 mm
Fig. 8 Ixodes barkeri Barker, 2019 in Description of the female, nymph and larva and mitochondrial genome, and redescription of the male of Ixodes barkeri Barker, 2019 (Acari: Ixodidae), from the short-beaked echidna, Tachyglossus aculeatus, with a consideration of the most suitable subgenus for this tick
Fig. 8 Ixodes barkeri Barker, 2019, light microscopy image of female (Barker & Barker Collection reference #B5321), male (# B4994), nymph (#B5321) and larva (# B5321). Horizontal broken scale bars: 1 mm; vertical scale bars also in mm
Fig. 2 Ixodes barkeri Barker, 2019 in Description of the female, nymph and larva and mitochondrial genome, and redescription of the male of Ixodes barkeri Barker, 2019 (Acari: Ixodidae), from the short-beaked echidna, Tachyglossus aculeatus, with a consideration of the most suitable subgenus for this tick
Fig. 2 Ixodes barkeri Barker, 2019, scanning electron micrographs of idiosoma of male. A Dorsal view; B dorsolateral view; C ventral view. Scale bars: 0.5 mm
Fig. 3 Ixodes barkeri Barker, 2019 in Description of the female, nymph and larva and mitochondrial genome, and redescription of the male of Ixodes barkeri Barker, 2019 (Acari: Ixodidae), from the short-beaked echidna, Tachyglossus aculeatus, with a consideration of the most suitable subgenus for this tick
Fig. 3 Ixodes barkeri Barker, 2019, scanning electron micrographs of male. A Spiracular plate (arrows show orientation of spiracular plate: a, anterior; d, dorsal). B Gnathosoma, dorsal view. C Gnathosoma, ventral view. D Gnathosoma, anteroventral view. E Coxae. F Trochanter I, dorsal view. Scale bars: A–D, F 0.1 mm; E, 0.2 mm
Mitochondrial genomes annotations for three previously submitted Rhizostomeae (OZ032132, OZ025205, OZ025288)
<p>This is a repository for the three Rhizostomeae mitochondrial genomes (OZ032132, OZ025205, OZ025288) that were annotated for analysis in the paper 'Complete linear mitochondrial genomes for Cephea cephea and Mastigias albipunctata (Scyphozoa: Rhizostomeae), with an analysis of phylogenetic relationships' by Tan KC, Collins AG and Ames CL.</p>
Figure 5 in Characterizing the complete mitochondrial genome of Psephenothrips eriobotryae Dang & Qiao (Thysanoptera: Phlaeothripidae) with massive gene arrangement in Phlaeothripidae
Figure 5. Comparison of the nucleotide sequences of the two putative control regions in the mitogenome of P. eriobotryae. The structural elements were recognized: repeat unit, TATA motif, TA(A)n motif, stem and loop, Poly T-stretch sequence, A + T-rich sequence and G(A)nT motif.
Figure 6 in Characterizing the complete mitochondrial genome of Psephenothrips eriobotryae Dang & Qiao (Thysanoptera: Phlaeothripidae) with massive gene arrangement in Phlaeothripidae
Figure 6. Gene rearrangement, transposition, inversion and inverse transposition. A. Comparison with the ancestor gene sequence of arthropods, Drosophila yakuba and P. eriobotryae gene sequence. B. Comparison with P. eriobotryae and other five known mitogenomes of Phlaeothripidae species. Yellow blocks show PCGs, blue ones show tRNA, red ones show rRNA and Colourless ones show CRs. Red dashes boxes represent conserve gene blocks. Red dotted ovals represent that the reverse transposition happened in the gene blocks. '+' indicates H-strand, and '-' indicates L-strand. Black arrows indicate the direction of gene translation.
Figure 1 in Characterizing the complete mitochondrial genome of Psephenothrips eriobotryae Dang & Qiao (Thysanoptera: Phlaeothripidae) with massive gene arrangement in Phlaeothripidae
Figure 1. The circular representation of the complete mitogenome of P. eriobotryae. The direction of gene transcription is indicated by the arrows. PCGs are showed as blue purple arrows, rRNA genes as green arrows, tRNA genes as pink purple arrow and CRs as orange arrows. The inner black circles show GC content and GC-skew plotted as the deviation from the average value of the entire sequence. The image was taken from slide-mounted specimen with an Olympus BX53 and edited manually in Adobe Photoshop 2022 v23.0.2.101.
Figure 4 in Characterizing the complete mitochondrial genome of Psephenothrips eriobotryae Dang & Qiao (Thysanoptera: Phlaeothripidae) with massive gene arrangement in Phlaeothripidae
Figure 4. Putative cloverleaf secondary structures of the 22 tRNAs of P. eriobotryae. The dot "." indicated mismatched base pairs.
Figure 3 in Characterizing the complete mitochondrial genome of Psephenothrips eriobotryae Dang & Qiao (Thysanoptera: Phlaeothripidae) with massive gene arrangement in Phlaeothripidae
Figure 3. The ratios of nonsynonymous substitutions (Ka) and synonymous substitutions (Ks), and the ratio of Ka/Ks for each PCGs in the mitogenome of P. eriobotryae.
Figure 7 in Characterizing the complete mitochondrial genome of Psephenothrips eriobotryae Dang & Qiao (Thysanoptera: Phlaeothripidae) with massive gene arrangement in Phlaeothripidae
Figure 7. Phylogenetic tree of thrips obtained from Maximum-likelihood and MrBayes based on 13 PCGs dataset. The numbers on branches are superimposed with bootstrap support values (BP) and the Bayesian posterior probability (PP).
Figure 2 in Characterizing the complete mitochondrial genome of Psephenothrips eriobotryae Dang & Qiao (Thysanoptera: Phlaeothripidae) with massive gene arrangement in Phlaeothripidae
Figure 2. Codons distribution and usage in the mitogenome of P. eriobotryae. A. Amino acid composition: codon families are provided on the x-axis; numbers of codons of each amino acid are provided on the y-axis. B. The relative synonymous codon usage (RSCU).
Figure 3 in The complete mitochondrial genome of Barbatula quignardi (Băcescu-Meşter, 1967) (Teleostei, Nemacheilidae)
Figure 3. – Maximum Likelihood phylogenetic tree of Barbatula mitogenomes; bootstrap values beside the nodes.
Figure 1 in The complete mitochondrial genome of Barbatula quignardi (Băcescu-Meşter, 1967) (Teleostei, Nemacheilidae)
Figure 1. – Voucher of the sequenced mitogenome, MNHN- IC-2010-1064 (FFFtag4260), 41.7 mm SL, Lez River at Prades-leLez (Hérault Dept.), 24th Nov. 2010, Denys and ONEMA coll.
Figure 2. – Maximum Likelihood phylogenetic tree inferred with the 13 in The complete mitochondrial genome of Thymallus thymallus (Linnaeus, 1758) (Actinopterygii, Salmonidae) obtained by long range PCRs and double multiplexing
Figure 2. – Maximum Likelihood phylogenetic tree inferred with the 13 protein coding genes. The values of bootstrap are represent- ed beside the nodes.
Fig. 3 in Partial molecular characterization of the mitochondrial genome of Baylisascaris columnaris and prevalence of infection in a wild population of Striped skunks
Fig. 3. Single nucleotide polymorphisms in the ND2 gene of B. columnaris, compared to B. procyonis. Nucleotide position numbers are shown at the top of the figure. Speciesspecific SNPs are shown in bold.
Fig. 1 in Partial molecular characterization of the mitochondrial genome of Baylisascaris columnaris and prevalence of infection in a wild population of Striped skunks
Fig. 1. Single nucleotide polymorphisms in the Cox1 gene of B. columnaris, compared to B. procyonis. Nucleotide position numbers are shown at the top of the figure. Italicized numbers represent the position number from a previously published partial sequence of the B. columnaris Cox1 gene (Franssen et al., 2013). Species-specific SNPs are shown in bold.
Fig. 2 in Partial molecular characterization of the mitochondrial genome of Baylisascaris columnaris and prevalence of infection in a wild population of Striped skunks
Fig. 2. Single nucleotide polymorphisms in the Cox2 gene of B. columnaris, compared to B. procyonis. Nucleotide position numbers are shown at the top of the figure. Italicized numbers represent the position number from a previously published partial sequence of the B. columnaris Cox2 gene (Franssen et al., 2013).
Fig. 4 in Partial molecular characterization of the mitochondrial genome of Baylisascaris columnaris and prevalence of infection in a wild population of Striped skunks
Fig. 4. Single nucleotide polymorphisms in several tRNA genes of B. columnaris, compared to B. procyonis, B. transfuga and B. schroederi. Nucleotide position numbers are shown at the top of the figure. SNPs which distinguish B. columnaris from other Baylisascaris species are shown in bold.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.