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42
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ShareScore release 0.7.1
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42 results for “Other; Expression profiling by high throughput sequencing”
Expression profiling by high throughput sequencing to evaluate the effect of aroylated phenylenediamine HO53 on autophagy induction in mature human bronchial epithelial cells (BCi-NS1.1 cell line)
GEO Series GSE160542. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
Expression profiling by high throughput sequencing
<h3><span>Single-cell RNA-seq libraries of HCC tumor tissues from PDX were generated using the 10x Genomics Chromium Single Cell 3' Reagent Kit (v3) following the manufacturer's protocol ("ChromiumNextGEMSingleCell3_v3.1_Rev_D"). The libraries were sequenced on an Illumina NovaSeq 6000 platform (Illumina) with paired-end 150bp reads. <span>Raw sequencing reads were preprocessed using Cell Ranger (version 6.1.2) software provided by 10x Genomics with reference data “refdata-gex-GRCh38-and-mm10-2020-A”. Cells and genes identified as mouse-oriented were filtered. </span></span></h3>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.