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72
datasets available to search
ShareScore release 0.7.1
Dataset results
72 results for “PacBio”
Data from: Next-generation polyploid phylogenetics: rapid resolution of hybrid polyploid complexes using PacBio single-molecule sequencing
Open the record for dataset details and reuse information.
Genomic N6-methyladenosine promotes expression of genes important for chromosome maintenance in bacteria [pacbio_DnmA]
GEO Series GSE130693. Bacillus subtilis PY79. 4 samples. Type: Methylation profiling by high throughput sequencing.
PacBio sequencing of Cp/Wp-driven transcripts from B95-8 LCLs
GEO Series GSE102102. Homo sapiens. 2 samples. Type: Other.
Methylome of Salmonella enterica subsp. Enterica serovar Javiana str. CFSAN001992 by PacBio SMRT Sequencing
GEO Series GSE45178. Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992. 1 samples. Type: Methylation profiling by high throughput sequencing.
DNA methylation from a Type I restriction modification system influences gene expression and virulence in Streptococcus pyogenes [PacBio]
GEO Series GSE130428. Streptococcus pyogenes. 1 samples. Type: Methylation profiling by high throughput sequencing.
Robust single-cell discovery of RNA targets of RNA binding proteins and ribosomes [STAMP_pacbio]
GEO Series GSE166404. Homo sapiens. 2 samples. Type: Other.
Analysis and comprehensive comparison of Pacbio and Nanopore-based RNA-sequencing in Arabidopsis transcriptome
GEO Series GSE141641. Arabidopsis thaliana. 4 samples. Type: Expression profiling by high throughput sequencing.
Triplexes are Dynamic DNA Secondary Structures Formed in vivo and Linked to Genome Instability [pacBio WGS]
GEO Series GSE204806. Homo sapiens. 4 samples. Type: Other.
Reference Long-read Isoform-aware Transcriptomes of Activated Human CD4 T cells (PacBio Iso-Seq, matched to Illumina RNA-Seq Data)
GEO Series GSE229971. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Reference Short-Read Transcriptomes of Activated Human CD4 T cells (Illumina RNA-Seq, Matched to PacBio Iso-Seq Data)
GEO Series GSE229969. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
PRMT5-mediated SRSF1 methylation promotes virus-positive Merkel cell carcinoma tumorigenesis by increasing Tip60 exon inclusion [PacBio Sequel IIe]
GEO Series GSE290569. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
A detailed analysis of second and third generation sequencing approaches for accurate length determination of short tandem repeats and homopolymers [TypeIV_PacBio]
GEO Series GSE286309. synthetic construct. 4 samples. Type: Other.
PacBio HiFi read assemblies of human, fly, maize and mouse evaluated in LJA paper
<p>PacBio HiFi read assemblies of human, fly, maize and mouse evaluated in <a href="https://www.biorxiv.org/content/10.1101/2020.12.10.420448v1">LJA paper</a>. The evaluated assemblers are LJA, hifiasm and HiCanu. Assemblies were generated using the latest versions of these tools as of August 2021 (LJA 0.1, hifiasm 0.15.5-r352, HiCanu 2.3).</p>
Reference Short-Read Transcriptomes of Human Peripheral Blood Lymphocytes (Illumina RNA-Seq, Matched to PacBio Iso-Seq Data)
GEO Series GSE202328. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq (Illumina and PacBio) of hESC
GEO Series GSE51861. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
A bioinformatic pipeline for analysis of M.EcoGII methylation footprint PacBio long-read sequence data
GEO Series GSE243114. Saccharomyces cerevisiae; Escherichia coli. 12 samples. Type: Other.
Isoform Usage as a Distinct Regulatory Layer Driving Nutrient-Responsive Metabolic Adaptation (Monkey-Pacbio)
GEO Series GSE248832. Macaca fascicularis. 4 samples. Type: Expression profiling by high throughput sequencing.
Genomic N6-methyladenosine promotes expression of genes important for chromosome maintenance in bacteria [pacbio_DnmA2]
GEO Series GSE130694. Bacillus subtilis. 1 samples. Type: Methylation profiling by high throughput sequencing.
Isoform-resolved transcriptome of the human preimplantation embryo [PacBio]
GEO Series GSE190547. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Sites of transcription initiation drive mRNA isoform selection [PacBio]
GEO Series GSE203497. Drosophila melanogaster. 3 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.