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zenodo40/100

FIG. 14 in The anatomy of Euphanerops longaevus Woodward, 1900, an anaspid-like jawless vertebrate from the Upper Devonian of Miguasha, Quebec, Canada

FIG. 14. — Euphanerops longaevus Woodward, 1900; Escuminac Formation, lower Frasnian (Upper Devonian), Miguasha, Quebec, Canada; anterior part of the head in two small, dorsoventrally collapsed individuals: A, MHNM 01-137; B, MHNM 01-158, notice the presence of two small patches of mineralized matter in exactly the same position as in MHNM 01-126A (see Figure 13B). Scale bar: 5 mm.

opencc-zeroDec 2007View details →
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FIG. 2 in The anatomy of Euphanerops longaevus Woodward, 1900, an anaspid-like jawless vertebrate from the Upper Devonian of Miguasha, Quebec, Canada

FIG. 2. — Euphanerops longaevus Woodward, 1900; Escuminac Formation, lower Frasnian (Upper Devonian), Miguasha, Quebec, Canada; holotype (BMNH P.6813): A, photograph of one part of the specimen (P.6813a); B, explanatory drawing; C, camera lucida drawing of the anterior end of the specimen (framed in B). Scale bars: A, B, 10 mm; C, 1 mm. B, C, after Arsenault & Janvier 1991: figs 2a; 3a, abbreviations modified.

opencc-zeroDec 2007View details →
zenodo40/100

FIG. 1 in The anatomy of Euphanerops longaevus Woodward, 1900, an anaspid-like jawless vertebrate from the Upper Devonian of Miguasha, Quebec, Canada

FIG. 1. — Euphanerops longaevus Woodward, 1900; Escuminac Formation, lower Frasnian (Upper Devonian), Miguasha, Quebec, Canada; holotype (BMNH P.6813), facsimile of Woodward's (1900) original illustration (part and counterpart ["1a"], and detail of a "scale" ["1b"]). Notice the upside down orientation of the specimen, as the caudal fin was thought to be epicercal. Original abbreviations: o, orbits; c, caudal fin; d, dorsal fin.

opencc-zeroDec 2007View details →
zenodo40/100

FIG. 11 in The anatomy of Euphanerops longaevus Woodward, 1900, an anaspid-like jawless vertebrate from the Upper Devonian of Miguasha, Quebec, Canada

FIG. 11. — Euphanerops longaevus Woodward, 1900; Escuminac Formation, lower Frasnian (Upper Devonian), Miguasha, Quebec, Canada: transverse (A) and longitudinal (B) sections through the "white line" of MHNM 01-123. Optical micrograph in normal light. Scale bars: 0.1 mm.

opencc-zeroDec 2007View details →
zenodo40/100

FIG. 19 in The anatomy of Euphanerops longaevus Woodward, 1900, an anaspid-like jawless vertebrate from the Upper Devonian of Miguasha, Quebec, Canada

FIG. 19. — Euphanerops longaevus Woodward, 1900; Escuminac Formation, lower Frasnian (Upper Devonian), Miguasha, Quebec, Canada; imperfectly preserved specimen, presumably collapsed more or less dorsoventrally, and showing the sinuous gill arches and possible imprints of afferent branchial blood vessels; specimen MHNM 01-150; part (A) and counterpart (B), photographed in immersion in water. Framed areas in A are illustrated in Figure 20C, D. Scale bars: 10 mm.

opencc-zeroDec 2007View details →
zenodo40/100

FIG. 21 in The anatomy of Euphanerops longaevus Woodward, 1900, an anaspid-like jawless vertebrate from the Upper Devonian of Miguasha, Quebec, Canada

FIG. 21. — Euphanerops longaevus Woodward, 1900; Escuminac Formation, lower Frasnian (Upper Devonian), Miguasha, Quebec, Canada: photograph (A) and camera lucida drawing (B) of the mid-dorsal part of the body of MHNM 01-123 (area framed in C). Scale bar: 10 mm.

opencc-zeroDec 2007View details →
zenodo40/100

FIG. 16 in The anatomy of Euphanerops longaevus Woodward, 1900, an anaspid-like jawless vertebrate from the Upper Devonian of Miguasha, Quebec, Canada

FIG. 16. — Euphanerops longaevus Woodward, 1900; Escuminac Formation, lower Frasnian (Upper Devonian), Miguasha, Quebec, Canada; large, laterally or ventrolaterally collapsed specimen (the "braincase" is probably twisted in an either ventral or dorsal aspect), showing and extensively mineralized endoskeleton (MHNM 01-123, same specimen as in Figure 5). Photographed dry. Scale bar: 50 mm.

opencc-zeroDec 2007View details →
zenodo40/100

FIG. 13 in The anatomy of Euphanerops longaevus Woodward, 1900, an anaspid-like jawless vertebrate from the Upper Devonian of Miguasha, Quebec, Canada

FIG. 13. — Euphanerops longaevus Woodward, 1900; Escuminac Formation, lower Frasnian (Upper Devonian), Miguasha, Quebec, Canada; small and presumably juvenile, dorsoventrally collapsed individuals, showing the three "head stains"; photographed in immersion in water: A, MHNM 01-89B, single specimen, the body of which is interrupted by a break in the concretion; the sediment that fills the presumed, horizontally broken, stomach contents is extremely fine-grained, and clearly differs from that of the surrounding matrix; B, MHNM 01-126A, smallest known individual, showing a pair of stains (one of which displays a slight trace of mineralized matter) behind the "head stains". Scale bars: A, 10 mm; B, 1 mm.

opencc-zeroDec 2007View details →
zenodo40/100

FIG. 3 in The anatomy of Euphanerops longaevus Woodward, 1900, an anaspid-like jawless vertebrate from the Upper Devonian of Miguasha, Quebec, Canada

FIG. 3. — Euphanerops longaevus Woodward, 1900; Escuminac Formation, lower Frasnian (Upper Devonian), Miguasha, Quebec, Canada: part (A) and counterpart (B1) of a complete specimen presumably collapsed in lateral aspect [MHNM 01-02, designated by Arsenault & Janvier (1991) as the holotype of Legendrelepis parenti], photographed in immersion in water, and explanatory drawing based on the counterpart (B2). Scale bar: 10 mm. B2, from Arsenault & Janvier 1991, abbreviations modified.

opencc-zeroDec 2007View details →
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FIG. 9 in The anatomy of Euphanerops longaevus Woodward, 1900, an anaspid-like jawless vertebrate from the Upper Devonian of Miguasha, Quebec, Canada

FIG. 9. — Euphanerops longaevus Woodward, 1900; Escuminac Formation, lower Frasnian (Upper Devonian), Miguasha, Quebec, Canada; attempted three-dimensional reconstruction of the structure of a mineralized gill arch (the transverse section is slightly oblique, to show the more spherical shape of the internal chondrocyte spaces). Scale bar: 1 mm.

opencc-zeroDec 2007View details →
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FIG. 8 in The anatomy of Euphanerops longaevus Woodward, 1900, an anaspid-like jawless vertebrate from the Upper Devonian of Miguasha, Quebec, Canada

FIG. 8. — Euphanerops longaevus Woodward, 1900; Escuminac Formation, lower Frasnian (Upper Devonian), Miguasha, Quebec, Canada; sections through mineralized endoskeletal elements sampled from MHNM 01-135A; A, longitudinal (below) and transverse (above) sections through "gill rods"; B, C, portion of one of the "gill rods" in A, optical micrograph in normal light (B) and Nomarski interference optical micrograph (C); D, E, portion of a larger elongated element (presumably a gill arch) optical micrograph in normal light (D) and Nomarski interference optical micrograph (E); F, G, transverse sections through a "gill rod" (F) and a larger elongated element, presumably a gill arch (G); optical micrograph in normal light. Scale bars: 100 µm.

opencc-zeroDec 2007View details →
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FIG. 4 in The anatomy of Euphanerops longaevus Woodward, 1900, an anaspid-like jawless vertebrate from the Upper Devonian of Miguasha, Quebec, Canada

FIG. 4. — Euphanerops longaevus Woodward, 1900; Escuminac Formation, lower Frasnian (Upper Devonian), Miguasha, Quebec, Canada;specimens photographed in immersion in water,and showing the characteristic aspect of the anterior part of the head when collapsed in lateral aspect, with the "head stains" overhanging the anterior limit of the branchial apparatus: part (A) and counterpart (B) of an imperfect specimen (MHNM 01-69A,B), designated by Arsenault & Janvier (1991) as the paratype of Legendrelepis parenti (see details of the "head stains" in Figure 38); C, imperfect specimen (MHNM 01-130). Scale bars: 10 mm.

opencc-zeroDec 2007View details →
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FIG. 7 in The anatomy of Euphanerops longaevus Woodward, 1900, an anaspid-like jawless vertebrate from the Upper Devonian of Miguasha, Quebec, Canada

FIG. 7. — Euphanerops longaevus Woodward, 1900; Escuminac Formation, lower Frasnian (Upper Devonian), Miguasha, Quebec, Canada; sections through mineralized endoskeletal elements sampled from MHNM 01-135A (A, D, E, optical micrographs in normal light; B, C, Nomarski interference optical micrographs): A, transverse section through a "copular element"; B, detail view of a different zone of the same sample showing transverse sections of "chondrocyte spaces" with well marked growth lines; C, detail view of the area framed in B, showing the thinner growth lines in the "mineralized territorial matrix"; D, Section through an assemblage comprizing a "gill rod" (left) and isolated "chondrocyte space" shells; note the typically dark stain of most of the elongated elements, notably "gill rods"; E, section through an isolated "chondrocyte space" shell showing microfractures (arrowheads). Scale bars: 100 µm.

opencc-zeroDec 2007View details →
zenodo40/100

FIG. 15 in The anatomy of Euphanerops longaevus Woodward, 1900, an anaspid-like jawless vertebrate from the Upper Devonian of Miguasha, Quebec, Canada

FIG. 15. — Euphanerops longaevus Woodward, 1900; Escuminac Formation, lower Frasnian (Upper Devonian), Miguasha, Quebec, Canada; camera-lucida drawings of the "head stains" in all known specimens that are regarded as being dorsoventrally collapsed: A, MHNM 01-126; B, MHNM 01-158; C, MHNM 01-137; D, MHNM 01-98; E, MHNM 01-101A; F, MHNM 01-89A, B; G, MHNM 01-136; H, MHNM 01-125A. Scale bar: 5 mm.

opencc-zeroDec 2007View details →
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FIG. 12 in The anatomy of Euphanerops longaevus Woodward, 1900, an anaspid-like jawless vertebrate from the Upper Devonian of Miguasha, Quebec, Canada

FIG. 12. — Euphanerops longaevus Woodward, 1900; Escuminac Formation, lower Frasnian (Upper Devonian), Miguasha, Quebec, Canada: A, almost complete specimen, the head of which is dorsolaterally collapsed and shows the three head stains (MHNM 01-98); B, detail of the anterior part of the head of the same specimen. Photographed in immersion in water. Scale bars: 5 mm.

opencc-zeroDec 2007View details →
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FIG. 18 in The anatomy of Euphanerops longaevus Woodward, 1900, an anaspid-like jawless vertebrate from the Upper Devonian of Miguasha, Quebec, Canada

FIG. 18. — Euphanerops longaevus Woodward, 1900; Escuminac Formation, lower Frasnian (Upper Devonian), Miguasha, Quebec, Canada; detail of the anterior part of the head of MHNM 01-02 (same specimen as in Figure 3): part (A) and counterpart (B), photographed in immersion in water. Scale bar: 5 mm.

opencc-zeroDec 2007View details →
zenodo40/100

Rates of greenhouse gas (carbon dioxide, methane and nitrous oxide) fluxes, denitrification-derived N2O and N2 fluxes and nitrification-derived N2O fluxes from salt marsh soils in Quebec, Canada and Louisiana, U.S. under ambient and elevated temperature and nutrient loading.

<p>Dataset used in&nbsp;<a href="https://link.springer.com/article/10.1007/s10533-023-01104-0?utm_source=rct_congratemailt&amp;utm_medium=email&amp;utm_campaign=oa_20231214&amp;utm_content=10.1007/s10533-023-01104-0#citeas">Elevated temperature and nutrients lead to increased N<sub>2</sub>O emissions from salt marsh soils from cold and warm climates</a>.</p> <p>The dataset contains fluxes calculated from headspace gas samples taken over a 24 hour period from intact soil cores, as well as corresponding environmental data. Intact soil cores (0-15 cm depth, 2.5 cm diameter) were taken at five sampling locations along a 20 m transect using a soil auger or piston corer. Samples were collected along a transect in four marsh sites in Quebec, Canada (La Pocati&egrave;re: 47&deg;22'24.7"N 70&deg;03'26.3"W) and Louisiana, U.S. (Barataria Basin: 29&deg;33'47.3"N 90&deg;04'22.8"W and 29&deg;29'52.2"N 89&deg;55'00.2"W) from two vegetation types (<em>Sporobolus alterniflorus</em> formerly known as <em>Spartina alterniflora </em>and<em> Sporobolus pumilus</em> formerly known as<em> Spartina patens</em>). In Quebec, the two vegetation zones were in the same marsh whereas in Louisiana two separate marshes, dominated by the relevant vegetation, were chosen. Soil samples were collected on the 20-21<sup>st</sup> July 2021 from Louisiana and the 9-10<sup>th</sup> August 2021 from Quebec. Environmental data was collected including <em>in-situ</em> soil temperature and salinity, and gravimetric soil moisture, extractable soil dissolved organic carbon (DOC), extractable soil total dissolved nitrogen (TDN), extractable soil nitrate, extractable soil ammonium, extractable soil soluble reactive phosphate, soil total carbon, soil total nitrogen, soil carbon to nitrogen ratio, soil d<sup>13</sup>C and soil d<sup>15</sup>N determined from additional 0-15 cm core samples. This project has received funding from the European Union&rsquo;s Horizon 2020 Research and Innovation Programme under Grant Agreement no. 838296, a NSERC Discovery Grant and a Natural Environment Research Council grant number (NE/T012323/1).</p> <p>Stable <sup>15</sup>N tracers were added to the intact soil cores so that at each location, at each treatment level (ambient and elevated, described below), there was one core receiving no tracer for greenhouse gas fluxes, one core receiving <sup>15</sup>N-NO<sub>3</sub><sup>‑ </sup>for denitrification rates and one core receiving <sup>15</sup>N-NH<sub>4</sub><sup>+</sup> for nitrification rates. The cores were incubated at ambient temperature (16 ℃ and 28.1 ℃ for Quebec and Louisiana, respectively) and nutrient concentrations (3.2 NO<sub>3</sub><sup>-</sup>, 2.0 NH<sub>4</sub><sup>+</sup>; 2.9 NO<sub>3</sub><sup>-</sup>, 2.5 NH<sub>4</sub><sup>+</sup>; 0.5 NO<sub>3</sub><sup>-</sup>, 7.3 NH<sub>4</sub><sup>+ </sup>and 5.7 NO<sub>3</sub><sup>-</sup>, 2.8 NH<sub>4</sub><sup>+</sup> mg g wet soil<sup>-1</sup> for Quebec <em>S. alterniflorus</em>, Quebec <em>S. pumilus</em>, Louisiana <em>S. alterniflorus</em> and Louisiana <em>S. pumilus</em>, respectively), and elevated temperature (ambient temperature +5 ℃) and nutrient concentration (double ambient concentration). Gas samples were collected from the headspace of 0-15 cm intact cores in a 20 cm high PVC pipe, capped at the top and bottom to create a 5 cm headspace. Gas samples were analysed for greenhouse gases (GHGs: N<sub>2</sub>O, CH<sub>4</sub>, CO<sub>2</sub>) and <sup>15</sup>N in denitrification-derived N<sub>2</sub>O, denitrification-derived N<sub>2</sub> and nitrification-derived N&shy;<sub>2</sub>O.</p> <p>Soil temperature (YSI 30, Baton Rouge, USA or DeltaTrak 11050, Pleasanton, USA) and porewater salinity (YSI 30, Baton Rouge, USA or portable ATC refractometer) were measured in-situ or in the laboratory using the portable refactometer.&nbsp;Additional soil samples were used for multiple analyses; one subsample was extracted with ultrapure water (18.2 M&Omega;) for DOC and TDN analysis, one subsample was extracted with 2M KCl for NO<sub>3</sub><sup>-</sup> and NH<sub>4</sub><sup>+</sup>, one subsample was extracted with Olsen-P solution (0.5 M NaHCO<sub>3</sub>, pH 8.5), for soluble reactive phosphate analysis and one subsample was weighed and dried for soil moisture and then finely ground and analysed for total carbon, total nitrogen, d<sup>13</sup>C and d<sup>15</sup>N.</p> <p>N<sub>2</sub>O, CH<sub>4</sub> and CO<sub>2</sub> concentrations were measured in the gas samples using a gas chromatograph interfaced with a PAL3 autosampler&nbsp;(Agilent 7890A, Agilent Technologies Ltd, USA) fitted with a flame ionisation detector (FID) for CH<sub>4</sub> analysis and a micro electron capture detector (mECD) for N<sub>2</sub>O analysis. CO<sub>2</sub> was methanised to CH<sub>4</sub> before analysis on the FID. The instrument precision as the relative standard deviation was &lt; 5 % for all of the gases, while the minimum detectable concentration difference (MDCD) was 9 ppb N<sub>2</sub>O, 72 ppb CH<sub>4 </sub>and 31 ppm CO<sub>2</sub>. Potential GHG fluxes were calculated from the linear portion or where the highest production was observed in the concentration-time series ( https://doi.org/10.2134/jeq2003.2436). If fluxes were below the MDCD they were set to zero see&nbsp;(https://doi.org/10.1002/2017JG003783). The <sup>15</sup>N content of the N<sub>2</sub> and N<sub>2</sub>O was determined using a continuous flow isotope ratio mass spectrometer (Elementar Isoprime PrecisION; Elementar Analysensysteme GmbH, Hanau, Germany) coupled with a trace-gas pre-concentrator inlet with autosampler (isoFLOW GHG; Elementar Analysensysteme GmbH, Hanau, Germany), with a standard deviation of d<sup>15</sup>N &lt; 0.05 %. Extractable dissolved organic carbon and total dissolved nitrogen were analysed in soil extractant (ultrapure water 18.2 M&Omega;, 7:1 of extractant to soil) on a TOC/TDN analyser (TOC VCSn +&nbsp;TMN-1, Shimadzu, Kyoto, Japan), with 50 mg C l<sup>-1</sup> and 10 mg l<sup>-1</sup> standards resulting in accuracy and precision of 0.3 and &plusmn;0.3 mg C l<sup>-1</sup>, and 0.5 and &plusmn;0.3 mg N l<sup>-1</sup>, respectively. Extractable nitrate+nitrite (assumed to be nitrate) and ammonium were analysed in soil extractant (2M KCl, 5:1 of extractant to soil) using a microplate reader and methods in Sims et al., 1995 (<a href="https://doi.org/10.1080/00103629509369298">https://doi.org/10.1080/00103629509369298</a>) with a limit of detection of 0.1 ppm and accuracy of &plusmn;5 %. Extractable phosphate was analysed in soil extractant (Olsen-P solution 0.5M NaHCO&shy;<sub>3</sub>, pH 8.5, 10:1 of extractant to dry soil) using a microplate reader and methods in Jeannotte et al., 2004 (https://doi.org/10.1007/s00374-004-0760-4) with a limit of detection of 1 mg P l<sup>-1</sup> and accuracy of &plusmn;6 %. Soil total carbon, total nitrogen, d<sup>13</sup>C and d<sup>15</sup>N analysis was performed using a continuous flow isotope ratio mass spectrometer (Elementar Isoprime PrecisION; Elementar Analysensysteme GmbH, Hanau, Germany) coupled with an elemental analyser (EA) inlet (vario PYRO cube; Elementar Analysensysteme GmbH, Hanau, Germany). The precision was &lt; 5 % for both C and N and the precision as a standard deviation was &lt; 0.06 % for both d<sup>13</sup>C and d<sup>15</sup>N. Results from the experiments were entered into an Excel spreadsheet for ingestion into the Zenodo data repository.</p>

opencc-by-4.0Feb 2023View details →
zenodo40/100

Simulated genomes from manuscript "On the Genes, Genealogies and Geographies of Quebec"

<p>Tree sequences of&nbsp;simulated whole genomes of 1.4M present day individuals with at least four grandparents linked to the BALSAC French-Canadian pedigree.<br> <br> Although the tree sequences have been censored to remove personal identifying information, we have included temporal (decade) and spatial (latitude and longitude) information for the 1.4M samples and their ~2M genealogically recoded genetic ancestors.</p>

opencc-by-4.0Jul 2022View details →
zenodo40/100

Quebec Trees Dataset

<p><strong>This dataset was generated for and used in the preprint "Influence of Temperate Forest Autumn Leaf Phenology on Segmentation of Tree Species from UAV Imagery Using Deep Learning". There can be found the detailed methodology.</strong></p><p><strong>Cloutier, M., Germain, M., &amp; Laliberté, E. (2023). Influence of Temperate Forest Autumn Leaf Phenology on Segmentation of Tree Species from UAV Imagery Using Deep Learning (p. 2023.08.03.548604). bioRxiv. https://doi.org/10.1101/2023.08.03.548604</strong></p><p>&nbsp;</p><p>For rapid visualisation of the data:</p><p><a href="https://arcg.is/1L1DL00&nbsp;">Imagery and annotations</a> (https://arcg.is/1L1DL00)</p><p><a href="https://umontreal.maps.arcgis.com/apps/instant/3dviewer/index.html?appid=0d48f1bd9bfc43a5a8e1ca53af02edbe">Point clouds</a></p><p>&nbsp;</p><p><strong>Abstract</strong></p><p>Remote sensing of forests has become increasingly accessible with the use of unoccupied aerial vehicles (UAV), along with deep learning, allowing for repeated high-resolution imagery and the capturing of phenological changes at larger spatial and temporal scales. In temperate forests during autumn, leaf senescence occurs when leaves change colour and drop. However, few UAV-acquired datasets follow the same individual species throughout a growing season at the individual tree level, allowing for a multitude of applications when used with deep learning. Here, we acquired high-resolution UAV imagery over a temperate forest in Quebec, Canada on seven occasions between May and October 2021. We segmented and labeled 23,000 tree crowns from 14 different classes to train and validate a CNN for each imagery acquisition. The dataset includes high-resolution RGB orthomosaics for seven dates in 2021, as well as associated photogrammetric point clouds. The dataset should be useful to develop new algorithms for instance segmentation and species classification of trees from drone imagery.<br>&nbsp;</p><p><strong>Classes</strong></p><p>Table 1. Main classes present in the dataset and total amount of annotations Label Common name Scientific name Family Annotations ABBA Balsam fir <i>Abies balsamea</i> Pinaceae 2895 ACPE Striped maple <i>Acer pensylvanicum</i> Sapindaceae 751 ACRU Red maple <i>Acer rubrum</i> Sapindaceae 5857 ACSA Sugar maple <i>Acer saccharum</i> Sapindaceae 1014 BEAL Yellow birch <i>Betula alleghaniensis</i> Betulaceae 290 BEPA Paper birch <i>Betula papyrifera</i> Betulaceae 5894 FAGR American beach <i>Fagus grandifolia</i> Fagaceae 222 LALA Tamarack <i>Larix laricina</i> Pinaceae 185 Picea Spruce <i>Picea</i> spp. Pinaceae 1022 PIST White pine <i>Pinus strobus</i> Pinaceae 569 Populus Aspen <i>Populus</i> spp. Salicaceae 1114 THOC Eastern white cedar <i>Thuja occidentalis</i> Cupressaceae 1510 TSCA Eastern hemlock <i>Tsuga canadensis</i> Pinaceae 59 Mort Dead tree - - 878 Total &nbsp; &nbsp; &nbsp; 22,260</p><p>The genus level classes, <i>Picea</i> spp. and <i>Populus</i> spp., include trees annotated at the species level (PIGL: <i>Picea glauca</i>, PIMA: <i>Picea mariana</i>, PIRU: <i>Picea rubens</i>, POGR: <i>Populus grandidentata</i>, POTR: <i>Populus tremuloides</i>). These classes were merged due to the difficulty in identifying the species and the similarities between the species.</p><p>Not included in this table are approximately 700 additional trees that were segmented and labelled and included in broader categories or in categories with too few individuals.</p><p>&nbsp;</p><p><strong>Included in the dataset</strong></p><p>The data is organized by acquisition date (YYYY-MM-DD). There are seven acquisition dates and the study site is divided into three zones.</p><p>The data included for each of the dates and zones are:</p><ul><li>RGB imagery in Cloud-Optimized GeoTIFF (COG)</li><li>Point cloud in Cloud-Optimized Point Cloud (COPC, .laz files)</li></ul><p>The vector layers included are:</p><ul><li>Individual tree level annotations in GeoPackage (GPKG), one for each zone</li><li>Polygons delimiting the inference data used in the publication</li></ul><p>A copy of the vector data is in each compressed file for each date.</p><p>Metadata files are also included for all the data in a separate folder.<br>&nbsp;</p>

opencc-by-4.0Sep 2023View details →
zenodo36/100

Biogeochemistry of Cromwell and Connelly streams, Laurentians region, Quebec, Canada

<p><strong>These data combine nitrogen, phosphorus and carbon content in water samples as well as discharge obtained from &gt;20 sampling sites along two streams in Saint-Hippolyte during a summer sampling campaign in 2017. These were obtained as part of a master&rsquo;s student graduate research project in the biological science department of the University of Montreal. Sampling occurred in July and August during baseflow, and computation allowed calculation of loadings and mass balances over multiple reaches along the streams, using sampling location as upstream and downstream references points. </strong></p>

opencc-by-4.0Dec 2019View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record