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422 results for “SER”
Curso CIPI - Módulo 10 - Aula 01 - Como ser mais criativo no processo de pesquisa
<p>Esse vídeo faz parte do "CURSO DE INTRODUÇÃO À PESQUISA EM INFORMÁTICA" (CIPI) desenvolvido por alunos de Ciência da Computação do Instituto Federal do Ceará (IFCE) - campus Tianguá, no contexto da disciplina de Tópicos Especiais em Informática Educativa (TEIE) em 2022.2, lecionada pela professora Cynthia Pinheiro Santiago.</p>
Rapid and Accurate Identification of Stem Cell Differentiation Stages via SERS and Convolutional Neural Networks
<p><a name="OLE_LINK2"></a><span>Monitoring the transition of cell states during induced pluripotent stem cell (iPSC) differentiation is crucial for clinical medicine and basic research. However, both identification category and prediction accuracy need further improvement. Here, we propose a method combining Surface-Enhanced Raman spectroscopy (SERS) with convolutional neural networks (CNN) to precisely identify and distinguish cell states during stem cell differentiation. First, mitochondria-targeted probes were synthesized by combining AuNRs and mitochondrial localization signal (MLS) peptides to obtain effective and stable SERS spectra signals at various stages of cell differentiation. Then, the SERS spectra served as input datasets, and their distinctive features were learned and distinguished by CNN. As a result, rapid and accurate identification of six different cell states, including the embryoid body (EB) stage, was successfully achieved throughout the stem cell differentiation process with an impressive prediction accuracy of 98.5%. Furthermore, the impact of different spectral feature peaks on the identification results was investigated, which provides a valuable reference for selecting appropriate spectral bands to identify cell states. This is also beneficial for shortening the spectral acquisition region to enhance spectral acquisition speed. These results suggest the potential for SERS-CNN models in quality monitoring of stem cells, advancing the practical applications of stem cells.</span></p>
Imunoensaio para diagnóstico da COVID-19 usando espectroscopia de espalhamento Raman amplificado em superfície (SERS)
<p>Os dados inseridos são provenientes da pesquisa de pós-doutorado do Dr. Wallance Moreira Pazin (Processo FAPESP 2020/12129-1), que trabalhou na confecção de um dispositivo para detecção do antígeno do vírus SARS-CoV-2 utilizando a técnica SERS. Nesse sentido, adicionamos aqui no repositório os metadados provenientes desta pesquisa, como forma de atender à exigência da FAPESP para o compartilhamento destes, de forma a garantir o maior benefício possível para o avanço científico, tecnológico, socioeconômico e cultural.</p>
Raw datasets and media accompanying the manuscript: Homogenous high enhancement surface-enhanced Raman scattering (SERS) substrates by simple hierarchical tuning of gold nanofoams
<p>Raw datasets and media accompanying the manuscript: Homogenous high enhancement surface-enhanced Raman scattering (SERS) substrates by simple hierarchical tuning of gold nanofoams</p>
Datasets for article "Transient behavior of three SU UMa-type dwarf novae; AR Pic, QW Ser and V521 Peg"
<p>Datasets for the article "Transient behavior of three SU UMa-type dwarf novae; AR Pic, QW Ser and V521 Peg"</p> <p> </p>
MasterFile Core SER-01
<p>This Master File presents the paleomagnetic data for Core SER-01 from Sergipe-Alagoas Basin, NE Brazil. This data was published in the research article "<em>Paleomagnetic results of Early Cretaceous sediments from South Atlantic Ocean: Implications for paleosecular variation and relative paleointensity". </em></p>
Figs. 1 y 2 in Primer caso de picadura de Sphictostethus xanthopus (Spinola, 1851) (Hymenoptera: Pompilidae) en un ser humano.
Figs. 1 y 2.- Sphictostethus xantophus (hembra), causante de la picadura.
Dataset for "Detection and quantification of ergothioneine in human serum using surface enhanced Raman scattering (SERS)"
Open the record for dataset details and reuse information.
Molecular surface coverage standards by reference-free GIXRF supporting SERS and SEIRA substrate benchmarking - Dataset
<p>This is the dataset of "Molecular surface coverage standards by reference-free GIXRF supporting SERS and SEIRA substrate benchmarking". </p> <p><a href="https://doi.org/10.1515/nanoph-2024-0222" target="_blank" rel="noopener">https://doi.org/10.1515/nanoph-2024-0222</a></p> <p>Part of this work was supported by the European project OpMetBat, code 21GRD01. The project has received funding from the European Partnership on Metrology, cofinanced from the the European Union's Horizon Europe Research and Innovation Programme, and by Participating States.</p>
AQ2197 ser-5(tm2654)I | 2009-12-15T12:43:02+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=MemAesFbWpY</li> <li><b>strain</b> : AQ2197</li> <li><b>timestamp</b> : 2009-12-15T12:43:02+00:00</li> <li><b>gene</b> : ser-5</li> <li><b>chromosome</b> : I</li> <li><b>allele</b> : tm2654</li> <li><b>strain_description</b> : ser-5(tm2654)I</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : ser-5 (tm2654) on food R_2009_12_15__12_43_02___1___8</li> <li><b>total time (s)</b> : 897.836</li> <li><b>frames per second</b> : 25.9067</li> <li><b>video micrometers per pixel</b> : 4.67178</li> <li><b>number of segmented skeletons</b> : 19472</li> </ul>
AQ2197 ser-5(tm2654)I | 2009-12-14T11:42:00+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=VQJ77tGLLM0</li> <li><b>strain</b> : AQ2197</li> <li><b>timestamp</b> : 2009-12-14T11:42:00+00:00</li> <li><b>gene</b> : ser-5</li> <li><b>chromosome</b> : I</li> <li><b>allele</b> : tm2654</li> <li><b>strain_description</b> : ser-5(tm2654)I</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : ser-5 (tm2654) on food L_2009_12_14__11_42_00___1___6</li> <li><b>total time (s)</b> : 897.628</li> <li><b>frames per second</b> : 25.974</li> <li><b>video micrometers per pixel</b> : 4.67178</li> <li><b>number of segmented skeletons</b> : 19201</li> </ul>
OH313 ser-2(pk1357)X | 2009-12-14T11:04:02+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=i6R6ayOwiWk</li> <li><b>strain</b> : OH313</li> <li><b>timestamp</b> : 2009-12-14T11:04:02+00:00</li> <li><b>gene</b> : ser-2</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : pk1357</li> <li><b>strain_description</b> : ser-2(pk1357)X</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : ser-2 (pk1357)X on food L_2009_12_14__11_04_02___1___4</li> <li><b>total time (s)</b> : 898.586</li> <li><b>frames per second</b> : 25.3165</li> <li><b>video micrometers per pixel</b> : 4.67178</li> <li><b>number of segmented skeletons</b> : 19487</li> </ul>
DA1814 ser-1(ok345)X | 2009-12-15T15:07:22+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=ed1jb4_AGjo</li> <li><b>strain</b> : DA1814</li> <li><b>timestamp</b> : 2009-12-15T15:07:22+00:00</li> <li><b>gene</b> : ser-1</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : ok345</li> <li><b>strain_description</b> : ser-1(ok345)X</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : ser-1 (ok345)X on food R_2009_12_15__15_07_22___1___11</li> <li><b>total time (s)</b> : 898.123</li> <li><b>frames per second</b> : 25.3807</li> <li><b>video micrometers per pixel</b> : 4.67178</li> <li><b>number of segmented skeletons</b> : 19223</li> </ul>
DA2100 ser-7(tm1325)X | 2009-12-17T13:02:59+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=xzkHZzhA11c</li> <li><b>strain</b> : DA2100</li> <li><b>timestamp</b> : 2009-12-17T13:02:59+00:00</li> <li><b>gene</b> : ser-7</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : tm1325</li> <li><b>strain_description</b> : ser-7(tm1325)X</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : ser-7 (tm1325)X on food R_2009_12_17__13_02_59___1___7</li> <li><b>total time (s)</b> : 898.87</li> <li><b>frames per second</b> : 25.5754</li> <li><b>video micrometers per pixel</b> : 4.67178</li> <li><b>number of segmented skeletons</b> : 19419</li> </ul>
DA1814 ser-1(ok345)X | 2009-12-14T10:40:49+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=ppGFyFrBW4I</li> <li><b>strain</b> : DA1814</li> <li><b>timestamp</b> : 2009-12-14T10:40:49+00:00</li> <li><b>gene</b> : ser-1</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : ok345</li> <li><b>strain_description</b> : ser-1(ok345)X</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : ser-1 (ok345)X on food R_2009_12_14__10_40_49___1___3</li> <li><b>total time (s)</b> : 899.395</li> <li><b>frames per second</b> : 25.2525</li> <li><b>video micrometers per pixel</b> : 4.67178</li> <li><b>number of segmented skeletons</b> : 19362</li> </ul>
DA2100 ser-7(tm1325)X | 2009-12-15T12:01:30+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=MxHly3jcxKI</li> <li><b>strain</b> : DA2100</li> <li><b>timestamp</b> : 2009-12-15T12:01:30+00:00</li> <li><b>gene</b> : ser-7</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : tm1325</li> <li><b>strain_description</b> : ser-7(tm1325)X</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : ser-7 (tm1325)X on food L_2009_12_15__12_01_30___1___6</li> <li><b>total time (s)</b> : 899.752</li> <li><b>frames per second</b> : 25.2525</li> <li><b>video micrometers per pixel</b> : 4.67178</li> <li><b>number of segmented skeletons</b> : 19297</li> </ul>
AQ866 ser-4(ok512)III | 2009-12-17T12:03:08+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=q7aDbTvTDRU</li> <li><b>strain</b> : AQ866</li> <li><b>timestamp</b> : 2009-12-17T12:03:08+00:00</li> <li><b>gene</b> : ser-4</li> <li><b>chromosome</b> : III</li> <li><b>allele</b> : ok512</li> <li><b>strain_description</b> : ser-4(ok512)III</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : ser-4 (ok512) on food R_2009_12_17__12_03_08___1___4</li> <li><b>total time (s)</b> : 899.485</li> <li><b>frames per second</b> : 25.7069</li> <li><b>video micrometers per pixel</b> : 4.67178</li> <li><b>number of segmented skeletons</b> : 19310</li> </ul>
OH313 ser-2(pk1357)X | 2009-12-17T11:44:32+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=6xAeCRt92DE</li> <li><b>strain</b> : OH313</li> <li><b>timestamp</b> : 2009-12-17T11:44:32+00:00</li> <li><b>gene</b> : ser-2</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : pk1357</li> <li><b>strain_description</b> : ser-2(pk1357)X</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : ser-2 (pk1357)X on food R_2009_12_17__11_44_32___1___3</li> <li><b>total time (s)</b> : 899.718</li> <li><b>frames per second</b> : 25.7069</li> <li><b>video micrometers per pixel</b> : 4.67178</li> <li><b>number of segmented skeletons</b> : 19256</li> </ul>
DA1814 ser-1(ok345)X | 2009-12-17T11:25:13+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=HDw70bXIlLQ</li> <li><b>strain</b> : DA1814</li> <li><b>timestamp</b> : 2009-12-17T11:25:13+00:00</li> <li><b>gene</b> : ser-1</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : ok345</li> <li><b>strain_description</b> : ser-1(ok345)X</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : ser-1 (ok345)X on food L_2009_12_17__11_25_13___1___2</li> <li><b>total time (s)</b> : 899.339</li> <li><b>frames per second</b> : 25.5754</li> <li><b>video micrometers per pixel</b> : 4.67178</li> <li><b>number of segmented skeletons</b> : 19002</li> </ul>
FX2146 ser-6(tm2146)IV | 2009-12-17T12:42:17+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=Qh_3wXhD_Cc</li> <li><b>strain</b> : FX2146</li> <li><b>timestamp</b> : 2009-12-17T12:42:17+00:00</li> <li><b>gene</b> : ser-6</li> <li><b>chromosome</b> : IV</li> <li><b>allele</b> : tm2146</li> <li><b>strain_description</b> : ser-6(tm2146)IV</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : ser-6 (tm2146)IV on food R_2009_12_17__12_42_17___1___6</li> <li><b>total time (s)</b> : 899.251</li> <li><b>frames per second</b> : 29.3255</li> <li><b>video micrometers per pixel</b> : 4.67178</li> <li><b>number of segmented skeletons</b> : 19691</li> </ul>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.