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75 results for “Standard Material”
Supplementary material 3 from: Abarenkov K, Adams RI, Irinyi L, Agan A, Ambrosio E, Antonelli A, Bahram M, Bengtsson-Palme J, Bok G, Cangren P, Coimbra V, Coleine C, Gustafsson C, He J, Hofmann T, Kristiansson E, Larsson E, Larsson T, Liu Y, Martinsson S, Meyer W, Panova M, Pombubpa N, Ritter C, Ryberg M, Svantesson S, Scharn R, Svensson O, Töpel M, Unterseher M, Visagie C, Wurzbacher C, Taylor AFS, Kõljalg U, Schriml L, Nilsson RH (2016) Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden). MycoKeys 16: 1-15. https://doi.org/10.3897/mycokeys.16.10000
Krona chart : Explanation note: Interactive Krona chart for visualizing the taxonomic distribution of annotated BMS sequences down to order level. Sequences classified as Fungi sp. (36.4%) or non-fungal (0.9%) were excluded from this dataset.
Supplementary material 1 from: Abarenkov K, Adams RI, Irinyi L, Agan A, Ambrosio E, Antonelli A, Bahram M, Bengtsson-Palme J, Bok G, Cangren P, Coimbra V, Coleine C, Gustafsson C, He J, Hofmann T, Kristiansson E, Larsson E, Larsson T, Liu Y, Martinsson S, Meyer W, Panova M, Pombubpa N, Ritter C, Ryberg M, Svantesson S, Scharn R, Svensson O, Töpel M, Unterseher M, Visagie C, Wurzbacher C, Taylor AFS, Kõljalg U, Schriml L, Nilsson RH (2016) Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden). MycoKeys 16: 1-15. https://doi.org/10.3897/mycokeys.16.10000
Keywords used to identify fungal sequences from the built environment in the INSDC : Explanation note: Keywords used to identify fungal sequences from the built environment in the INSDC.
Supplementary material 2 from: Abarenkov K, Adams RI, Irinyi L, Agan A, Ambrosio E, Antonelli A, Bahram M, Bengtsson-Palme J, Bok G, Cangren P, Coimbra V, Coleine C, Gustafsson C, He J, Hofmann T, Kristiansson E, Larsson E, Larsson T, Liu Y, Martinsson S, Meyer W, Panova M, Pombubpa N, Ritter C, Ryberg M, Svantesson S, Scharn R, Svensson O, Töpel M, Unterseher M, Visagie C, Wurzbacher C, Taylor AFS, Kõljalg U, Schriml L, Nilsson RH (2016) Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden). MycoKeys 16: 1-15. https://doi.org/10.3897/mycokeys.16.10000
Annotations made during the workshop : Explanation note: The annotations made during the workshop shown with original INSDC data. For the BMS, we targeted nine MIxS-BE items plus country of collection, host of collection, host association, and a general "Comment" field. For the OMS, we targeted country of collection, host of collection, host association, and a general "Comment" field.
Lab_02_SOP - Concordant inter-laboratory derived concentrations of ceramides in human plasma reference materials via authentic standards
<h1>Lab_02_SOP - Concordant inter-laboratory derived concentrations of ceramides in human plasma reference materials via authentic standards - mzML files</h1> <p>This dataset is part of the <a href="https://doi.org/10.5281/zenodo.12632989" target="_blank" rel="noopener">ILS Ceramide Ring Trial</a>. The suffix 'SOP' indicates that the results were obtained using the recommended and standard operating procedure protocol to prepare and measure all samples, while the suffix 'OTHER' indicates that the corresponding lab prepared and measured the samples according to their own internal protocol. Please check the corresponding mapping file 'ILS-Ceramide-Ring-Trial-Datasets.csv' in the ILS Ceramide Ring Trial record for a mapping of the originally submitted lab reports and the final lab number as reported in the manuscript.</p> <p>All reports together with the code for analysis and visualization, reproducing the figures in the manuscript, are available under the following doi: <a href="../doi/10.5281/zenodo.10081970" target="_blank" rel="noopener">https://zenodo.org/doi/10.5281/zenodo.10081970</a>. This links to releases of the following GitHub repository: <a href="https://github.com/lifs-tools/ils-ceramide-ring-trial" target="_blank" rel="noopener">https://github.com/lifs-tools/ils-ceramide-ring-trial</a>. The archived version of the lab reports, workflow source code and manuscript visualizations are also available <a href="../doi/10.5281/zenodo.10081970" target="_blank" rel="noopener">here</a>.</p> <p>Please note that most datasets have been acquired in MRM mode, such that the msconvert conversion to mzML has stored the MRM data in the chromatogram part of the mzML files.</p> <p>The msconvert Docker container (Proteowizard release: 3.0.24172 (63d00b1), build date Jun 202 2024 20:01:14) was used with the native vendor libraries / peak picking for conversion, using default arguments. m/z values were encoded with 64 bit (default), while intensity values were encoded with 32 bit (default). All binary data was zlib-compressed.</p>
Lab_32_SOP - Concordant inter-laboratory derived concentrations of ceramides in human plasma reference materials via authentic standards
<h1>Lab_32_SOP - Concordant inter-laboratory derived concentrations of ceramides in human plasma reference materials via authentic standards - mzML files</h1><p>This dataset is part of the <a href="https://doi.org/10.5281/zenodo.12632989" target="_blank">ILS Ceramide Ring Trial</a>. The suffix 'SOP' indicates that the results were obtained using the recommended and standard operating procedure protocol to prepare and measure all samples, while the suffix 'OTHER' indicates that the corresponding lab prepared and measured the samples according to their own internal protocol. Please check the corresponding mapping file 'ILS-Ceramide-Ring-Trial-Datasets.csv' in the ILS Ceramide Ring Trial record for a mapping of the originally submitted lab reports and the final lab number as reported in the manuscript.</p><p>All reports together with the code for analysis and visualization, reproducing the figures in the manuscript, are available under the following doi: <a href="https://zenodo.org/doi/10.5281/zenodo.10081970" target="_blank">https://zenodo.org/doi/10.5281/zenodo.10081970</a>. This links to releases of the following GitHub repository: <a href="https://github.com/lifs-tools/ils-ceramide-ring-trial" target="_blank">https://github.com/lifs-tools/ils-ceramide-ring-trial</a>. The archived version of the lab reports, workflow source code and manuscript visualizations are also available <a href="https://zenodo.org/doi/10.5281/zenodo.10081970" target="_blank">here</a>.</p><p>Please note that most datasets have been acquired in MRM mode, such that the msconvert conversion to mzML has stored the MRM data in the chromatogram part of the mzML files.</p> <p>The msconvert Docker container (Proteowizard release: 3.0.24172 (63d00b1), build date Jun 202 2024 20:01:14) was used with the native vendor libraries / peak picking for conversion, using default arguments. m/z values were encoded with 64 bit (default), while intensity values were encoded with 32 bit (default). All binary data was zlib-compressed.</p>
Supplementary material 3 from: Groom Q, Desmet P, Reyserhove L, Adriaens T, Oldoni D, Vanderhoeven S, Baskauf SJ, Chapman A, McGeoch M, Walls R, Wieczorek J, Wilson JR.U, Zermoglio PFF, Simpson A (2019) Improving Darwin Core for research and management of alien species. Biodiversity Information Science and Standards 3: e38084. https://doi.org/10.3897/biss.3.38084
The Convention on Biological Diversity pathway vocabulary adapted from Harrower et al. 2017. Including proposed simple labels for these terms.
Supplementary material 1 from: Groom Q, Desmet P, Reyserhove L, Adriaens T, Oldoni D, Vanderhoeven S, Baskauf SJ, Chapman A, McGeoch M, Walls R, Wieczorek J, Wilson JR.U, Zermoglio PFF, Simpson A (2019) Improving Darwin Core for research and management of alien species. Biodiversity Information Science and Standards 3: e38084. https://doi.org/10.3897/biss.3.38084
Distinct values for dwc:establishmentMeans and their frequency from observations on the Global Biodiversity Information Facility on 27 February 2017. Taken from GitHub repository of the Darwin Core Questions & Answers Site (https://github.com/tdwg/dwc-qa/tree/master/data/GBIFDistinctValues).
Supplementary material 2 from: Groom Q, Desmet P, Reyserhove L, Adriaens T, Oldoni D, Vanderhoeven S, Baskauf SJ, Chapman A, McGeoch M, Walls R, Wieczorek J, Wilson JR.U, Zermoglio PFF, Simpson A (2019) Improving Darwin Core for research and management of alien species. Biodiversity Information Science and Standards 3: e38084. https://doi.org/10.3897/biss.3.38084
A tab-delimited file mapping values (synonyms; orthographic and language variations) found in Darwin Core dwc:establishmentMeans to a controlled vocabulary.
Supplementary material 1 from: Penev L, Koureas D, Groom Q, Lanfear J, Agosti D, Casino A, Miller J, Arvanitidis C, Cochrane G, Barov B, Hobern D, Banki O, Addink W, Kõljalg U, Ruch P, Copas K, Mergen P, Güntsch A, Benichou L, Benito Gonzalez Lopez J (2021) Towards Interlinked FAIR Biodiversity Knowledge: The BiCIKL perspective. Biodiversity Information Science and Standards 5: e74233. https://doi.org/10.3897/biss.5.74233
The BiCIKL (Biodiversity Community Integrated Knowledge Library) Project Presentation: Goals and Ambitions
A Study Comparing Eggshell Based and Gold Standard Materials to Heal Deep Tooth Damage in Adult Molars
ClinicalTrials.gov study NCT07183514. IPD Sharing: NO. Countries: 1. Publications: 1.
Mechanical test on different elastomer materials based on the ASTM D412-16 standard
Open the record for dataset details and reuse information.
Implementing standardized provider documentation in a tertiary epilepsy clinic: supplemental material
Open the record for dataset details and reuse information.
Supplementary material 1 from: Schulz AN, Mech AM, Allen CR, Ayres MP, Gandhi KJK, Gurevitch J, Havill NP, Herms DA, Hufbauer RA, Liebhold AM, Raffa KF, Raupp MJ, Thomas KA, Tobin PC, Marsico TD (2020) The impact is in the details: evaluating a standardized protocol and scale for determining non-native insect impact. NeoBiota 55: 61-83. https://doi.org/10.3897/neobiota.55.38981
Supplementary tables and figures
Supplementary material 1 from: Wilson JRU, Datta A, Hirsch H, Keet J-H, Mbobo T, Nkuna KV, Nsikani MM, Pyšek P, Richardson DM, Zengeya TA, Kumschick S (2020) Is invasion science moving towards agreed standards? The influence of selected frameworks. In: Wilson JR, Bacher S, Daehler CC, Groom QJ, Kumschick S, Lockwood JL, Robinson TB, Zengeya TA, Richardson DM. NeoBiota 62: 569-590. https://doi.org/10.3897/neobiota.62.53243
Data used in a citation analysis of frameworks in invasion science
Supplementary material 2 from: Wilson JRU, Datta A, Hirsch H, Keet J-H, Mbobo T, Nkuna KV, Nsikani MM, Pyšek P, Richardson DM, Zengeya TA, Kumschick S (2020) Is invasion science moving towards agreed standards? The influence of selected frameworks. In: Wilson JR, Bacher S, Daehler CC, Groom QJ, Kumschick S, Lockwood JL, Robinson TB, Zengeya TA, Richardson DM. NeoBiota 62: 569-590. https://doi.org/10.3897/neobiota.62.53243
Supplementary material to a citation analysis of frameworks in invasion science
Figure 1 from: Proskurina K, Yevtifieieva O, Mala O, Mashtaler V (2021) Development of the method for standardization of the medicinal plant raw material of Cichorium intybus L. herb by the total amount of hydroxycinnamic acid derivatives. Pharmacia 68(1): 167-173. https://doi.org/10.3897/pharmacia.68.e49273
Figure 1 The TLC chromatogram of hydroxycinnamic acids in ethanolic extracts of different samples of chicory herb originating from Ukraine. S1–3: chlorogenic acid, caffeic acid and ferulic acid as references; for plant extracts, see abbreviations in Table 3.
Figure 2 from: Proskurina K, Yevtifieieva O, Mala O, Mashtaler V (2021) Development of the method for standardization of the medicinal plant raw material of Cichorium intybus L. herb by the total amount of hydroxycinnamic acid derivatives. Pharmacia 68(1): 167-173. https://doi.org/10.3897/pharmacia.68.e49273
Figure 2 The absorption spectrum of ethanol (50 per cent V/V) chicory herb extracts for 8 sample of the raw plant material. See abbreviations in Table 3. UV/Vis absorption spectra of chlorogenic acid chemical standard at 10.08 µg/ml in ethanol (50 per cent V/V).
Figure 3 from: Proskurina K, Yevtifieieva O, Mala O, Mashtaler V (2021) Development of the method for standardization of the medicinal plant raw material of Cichorium intybus L. herb by the total amount of hydroxycinnamic acid derivatives. Pharmacia 68(1): 167-173. https://doi.org/10.3897/pharmacia.68.e49273
Figure 3 Absorbance values of chlorogenic acid as a function of the solution concentrations. The data correlation was calculated by a linear fit.
Supplementary Material Accompanying the Study "First Steps Towards the Integration of Resources on Historical Glossing Traditions in the History of Chinese: A Collection of Standardized Fǎnqiè Spellings from the Guǎngyùn"
Open the record for dataset details and reuse information.
Supplementary material 1 from: Sundermann EM, Nauta M, Swart A (2021) A ready-to-use dose-response model of Campylobacter jejuni implemented in the FSKX-standard. Food Modelling Journal 2: e63309. https://doi.org/10.3897/fmj.2.63309
CampylobacterDRM.fskx
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.