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4,489 results for “TRANSITION”
Experimental data and scripts used for the paper "Experiments and low-order modelling of intermittent transitions between clockwise and anticlockwise spinning thermoacoustic modes in annular combustors"
<p>The folder contains the experimental data, the scripts an the instructions to generate the figures of the paper.</p> <p>Because of difficulties for uploading large files on zenodo, the heaviest files, which are the acoustic measurement files (.TDMS format), are not included in the zip file, but are put aside of it.</p> <p>For the scripts to work correctly, all the tdms files should be moved in the folder Faure-BeaulieuA_StochasticTransitionsAzimuthalMode_PROCI_20200713/01_input_data/</p>
Supplementary material for "Towards a metagenomics machine learning interpretable model for understanding the transition from adenoma to colorectal cancer"
<p>Supplementary files for "Towards a metagenomics machine learning interpretable model for understanding the transition from adenoma to colorectal cancer".</p>
Cubic vertex-transitive graphs on up to 1280 vertices.
<p>The <strong>Census of cubic vertex-transitive graphs</strong> contains the list of all cubic vertex-transitive graphs on at most 1280 vertices, together with a number of graph-theoretic properties (listed below). </p> <p>The list of graphs was originally compiled by Pablo Spiga, Gabriel Verret, and Primož Potočnik. The authors described the theoretical results and computations that were needed to compile the list in the paper <a href="https://doi.org/10.1016/j.jsc.2012.09.002">Cubic vertex-transitive graphs on up to 1280 vertices</a>. The original dataset files are available on <a href="https://www.fmf.uni-lj.si/~potocnik/work.htm">Potočnik's website</a>.</p> <p>The graph-theoretic properties were either computed or verified with the SageMath system, with a few exceptions. Some of the properties were not supported by SageMath at the time of computation, and were contributed: is_cayley, odd_girth, is_partial_cube (based on some previous code). The methods <a href="https://github.com/DiscreteZOO/DiscreteZOO-sage/blob/df8c8368a4912bd5396001139a13a9f3b9b2863f/discretezoo/entities/cvt/cvtgraph.py#L177-L249">is_moebius_ladder, is_prism, and is_spx</a> (together with <a href="https://github.com/DiscreteZOO/DiscreteZOO-sage/blob/df8c8368a4912bd5396001139a13a9f3b9b2863f/discretezoo/entities/spx/spxgraph.py#L182-L300">SPX constructions</a>) were computed in DiscreteZOO.</p> <p>A searchable version of this dataset is available on an instance of the <a href="https://data.mathhub.info/">MathDataHub</a> platform hosted at <a href="http://mdh.graphsym.net/collection/CVT">mdh.graphsym.net/collection/CVT</a>.</p> <p>You can download this collection either as an SQLite database or as CSV files. Contents:</p> <ul> <li>master_db_zenodo.sqlite3: the SQLite database,</li> <li>create_database.sql: the SQL script that creates empty database schema used in the SQLite database (not necessary for opening the database),</li> <li>main_Graph.txt: the main table containing graphs as a CSV file,</li> <li>main_Graph.sample.txt: a sample of the main table,</li> <li>main_CLTime.txt: the table containing canonical labelling computation times as a CSV file.</li> <li>main_CLTime.sample.txt: a sample of the canonical labeling table</li> </ul> <p><strong>Structure and contents</strong></p> <p>Each graph is given a census-specific identifier <em>CVT[n,i]</em> (the <em>i</em>-th graph of order <em>n</em> in the census). Some graphs have a list of more easily recognized names (such as the Petersen graph). The dataset contains graphs in two formats: the <a href="https://users.cecs.anu.edu.au/~bdm/data/formats.html">sparse6 format</a> and a format readable by the computer algebra system Magma. For compatibility with SQLite, boolean values are represented with ones and zeroes (true and false, respectively).</p> <p>Data columns with types:</p> <ul> <li>canonical_label (string): the graph in sparse6 format, canonically labelled with nauty (call with no additional arguments), version: nauty-27r3,</li> <li>cvt_index (string): the census-specific identifier <em>CVT[n,i]</em> (the <em>i</em>-th graph of order <em>n</em> in the census),</li> <li>data (string): the graph in sparse6 format,</li> <li>raw_magma_code (string): the list of vertex neighbourhoods, readable by the computer algebra system Magma,</li> <li>name (string): a list of names of the graph,</li> <li>number_of_vertices (integer): number of vertices in the graph,</li> <li>clique_number (integer): the number of vertices in the largest clique subgraph,</li> <li>diameter (integer): the greatest distance between any pair of points,</li> <li>girth (integer): the length of the shortest cycle in the graph,</li> <li>is_arc_transitive (boolean): for every two ordered pairs of adjacent vertices, does there exist an automorphism, mapping one to the other,</li> <li>is_bipartite (boolean): can the vertices of the graph be partitioned into two sets, such that every edge connects a vertex in one set to a vertex in the other set,</li> <li>is_cayley (boolean): can the graph be constructed as a Cayley graph of some group for some generating set,</li> <li>is_distance_regular (boolean): for any two vertices <em>v</em> and <em>w</em>, does the number of vertices at distance <em>j</em> from <em>v</em> and at distance <em>k</em> from <em>w</em> depend only upon <em>j</em>, <em>k</em>, and <em>i = d(v, w)</em>,</li> <li>is_distance_transitive (boolean): for any two vertices <em>v</em> and <em>w</em> at any distance <em>i</em>, and any other two vertices <em>x</em> and <em>y</em> at the same distance, is there an automorphism of the graph that carries <em>v</em> to <em>x</em> and <em>w</em> to <em>y</em>,</li> <li>is_edge_transitive (boolean): for every two edges, does there exist an automorphism, mapping one to the other,</li> <li>is_hamiltonian (boolean): does the graph have a cycle that visits each vertex exactly once,</li> <li>is_partial_cube (boolean): is the graph isometric to a subgraph of a hypercube,</li> <li>is_split (boolean): can the vertices of the graph be partitioned into a clique and an independent set,</li> <li>is_strongly_regular (boolean): do there exists <span class="math-tex">\(\lambda\)</span> and <span class="math-tex">\(\mu\)</span> such that every two adjacent vertices have <span class="math-tex">\(\lambda\)</span> common neighbours and every two non-adjacent vertices have <span class="math-tex">\(\mu\)</span> common neighbours,</li> <li>odd_girth (integer): length of the shortest odd cycle,</li> <li>triangles_count (integer): the number of cycles of length <em>3</em> in the graph,</li> <li>is_moebius_ladder (boolean): is the graph a Möbius ladder,</li> <li>is_prism (boolean): is the graph a skeleton of a prism,</li> <li>is_spx (boolean): does the graph belong to the Split Praeger-Xu family of graphs,</li> <li>vertex_stabilizer (list of integer pairs): the order of the vertex stabilizer of the graph's automorphism group, given as a prime factorization; a list of pairs <span class="math-tex">\((p_i, e_i)\)</span> of primes and exponents such that <span class="math-tex">\(\prod_i p_i^{e_i}\)</span> is the order of the vertex stabilizer.</li> </ul> <p>This work was partially supported by ARRS research project no. J1-1691.</p>
Tabular datasets for "In situ structural analysis reveals membrane shape transitions during autophagosome formation"
<p>Tabular source data for all plots in the manuscript "In situ structural analysis reveals membrane shape transitions during autophagosome formation". The article is available at https://doi.org/10.1101/2022.05.02.490291. The naming of the sheets in the .xlsx files corresponds to the figure number and panel.</p>
Raw data to "Scaling at quantum phase transitions above the upper critical dimension"
<p>This directory contains the data used to generate the numerical results in the work "Scaling at quantum phase transitions above the upper critical dimension[1]".</p> <p>To get an overview of the organization of the directory and a description of the data we recommend the README file.</p> <p>[1]: A. Langheld et al., Scaling at quantum phase transitions above the upper critical dimension, <a href="https://scipost.org/10.21468/SciPostPhys.13.4.088">SciPost Phys. <strong>13</strong> 088</a>, 2022.</p>
PhasAGE Training School 2 - Phase separations and transitions by viral proteins: from viral factories to interference with host cell functions- LECTURE
<p>The Training School 2 “Biomolecular condensates in cell function, aging and disease” is the <strong>second</strong> edition of a series of PhasAGE training activities.</p> <p> </p> <p>The main goal of this training school is to raise awareness and provide expertise on fundamental aspects of phase separation and formation of <strong>biomolecular condensates</strong>, specifically covering the importance of this process to cellular biology and its contribution to the aging process and age-related diseases.</p>
Frequency ratio of the Ar13+ clock transition and the 171Yb+ ocutpole transition
<p>Measured and corrected frequency ratio between the optical clock transition in Ar<sup>13+</sup> and the octupole transition in <sup>171</sup>Yb<sup>+</sup>. Data is provided for the two isotopes <sup>40</sup>Ar<sup>13+</sup> and <sup>36</sup>Ar<sup>13+</sup>.</p>
Disorder-free localization transition in a two dimensional lattice gauge theory
<p>Data files for Figs 2 and 3 from the paper "Disorder-free localization transition in a two dimensional lattice gauge theory".</p>
Effects of secondary ice processes on a stratocumulus to cumulus transition during a cold-air outbreak
<p>Dataset of model simulations discussed in paper "Effects of secondary ice processes on a stratocumulus to cumulus transition during a cold-air outbreak", <a href="https://doi.org/10.1016/j.atmosres.2022.106302">https://doi.org/10.1016/j.atmosres.2022.106302</a></p>
Nonperturbative study of the electroweak phase transition in the real scalar singlet extended Standard Model: dataset
<p>Collection of simulation results as presented in figures of the paper "Nonperturbative study of the electroweak phase transition in the real scalar singlet extended Standard Model".</p>
Extended Room Transition Dataset (ERTD) of room impulse responses in coupled rooms
<p>This dataset accompanies the publication</p> <blockquote> <div> <div> <div> <p>Georg Götz, Sebastian J. Schlecht, and Ville Pulkki. Common-slope modeling of late reverberation. IEEE/ACM Transactions on Audio, Speech, and Language Processing, Vol. 31, pp. 3945–3957, September 2023. doi: <a href="https://doi.org/10.1109/TASLP.2023.3317572" target="_blank" rel="noopener">10.1109/TASLP.2023.3317572</a></p> </div> </div> </div> </blockquote> <div> <div> <div> <p> </p> <div> <div> <div> <p>The dataset contains finite-difference time-domain (FDTD) simulations. It extends the Room Transition Dataset (RTD) by McKenzie et al (doi: <a href="https://doi.org/10.5281/zenodo.4636068" target="_blank" rel="noopener">10.5281/zenodo.4636068</a>). More precisely, it extends the “meeting room to hallway” transition, by additional receiver positions in both rooms. The ERTD contains 2833 RIRs in total. For all RIRs, the sound source position was chosen according to the “source in meeting room, no line-of-sight” (NLOS) configuration of the RTD. While the RTD only features receiver positions on a straight line between the rooms, the Extended Room Transition dataset samples the entire room geometry using a uniform grid with 0.2 m resolution. All simulations are performed on the horizontal plane at 1.55 m height.</p> <p>We simulated two variants of the dataset. In variant ERTD1, the wall absorption properties were assigned to approximately match the corresponding measurements. The absorption coefficient was assigned uniformly to all walls in the respective rooms, where the meeting room walls exhibited an absorption coefficient alphaR1 = 0.12, while the hallway was modeled less absorbent with alphaR2 = 0.042. In variant ERTD2, a significantly higher absorption coefficient alphaR3 = 0.48 is assigned to the right wall of the hallway, while all other surfaces are modeled analogous to ERTD1. We use ERTD2 in our evaluation to demonstrate that the common-slope model can also be used in environments with very non-uniform absorption distributions.</p> <p> </p> <p>___________</p> <div> <div> <div> <p>We acknowledge the computational resources provided by the Aalto Science-IT project.</p> </div> </div> </div> </div> </div> </div> </div> </div> </div>
Research data for "Phase transitions in NiO during the Oxygen Evolution Reaction assessed via electrochromic phenomena through operando UV-Vis spectroscopy"
<p>This is the dataset supporting the publication "Phase transitions in NiO during the Oxygen Evolution Reaction assessed via electrochromic phenomena through operando UV-Vis spectroscopy", published by the authors in Electrochimica Acta (2024), 144626 under <a title="Persistent link using digital object identifier" href="https://doi.org/10.1016/j.electacta.2024.144626" target="_blank" rel="noreferrer noopener">doi.org/10.1016/j.electacta.2024.144626</a>.</p> <p>The data is ordered according to Figure numbers in the main manuscript and the electronic supplementary information.</p>
Data gathered during the first and second stage of carrying out the NCN research project "Odmieńcy. Performances of otherness in the Polish transition culture" (year 2022 and 2023) - PI
<p>Data gathered during the first and secon phase of the project "Odmieńcy. Performances of otherness in Polish transition culture" by Dorota Sosnowska used as a basis for two papers: <a href="https://open.icm.edu.pl/items/9117fe29-528d-43ff-99c7-2e1fe0a8a93a">Blasted 1999. Sarah Kane’s Body Against the Archive (icm.edu.pl)</a> and <a href="https://open.icm.edu.pl/items/0aa7964c-b690-42af-8f7c-3d4fc62084b5">Brzydkie uczucia. O nudzie w sztuce i teatrze lat’ 90 (icm.edu.pl)</a></p>
Data gathered during the first and second stage of carrying out the NCN research project "Odmieńcy. Performances of otherness in the Polish transition culture" (year 2022 and 2023)
<p>Data gathered during the first and secon phase of the project "Odmieńcy. Performances of otherness in Polish transition culture" by Łukasz Kiełpiński used as a basis for two papers: <a href="../records/10625768">Zarządzanie ambiwalencją. Polski dyskurs ekspercki wokół HIV/AIDS na przełomie lat osiemdziesiątych i dziewięćdziesiątych XX wieku (zenodo.org)</a> and <a href="../records/10625805">Gra o sumie zerowej. Ekonomia wstydu w filmie "Pora na czarownice" (zenodo.org)</a></p>
Interviews with editors of library science journals on transitioning to open access
<p>These three files are related to qualitative, semi-structured interviews conducted in Fall 2023 with editors of Library and Information Science (LIS) journals on transitioning to open access. One subgroup consisted of participants who were editors at the time of an LIS journal when it transitioned (or flipped) to an open access model that does not charge a fee to either readers or authors (which this study refers to as equitable open access), and the other subgroup consisted of current editors (at the time) of LIS journals that have not yet transitioned (or unflipped) to an equitable open access model. Two of the files are the interview protocols for each group of flipped and unflipped editors, and the third file is the codebook the researchers used to analyze the interview transcripts. Interview transcripts are not being publicly shared to ensure confidentiality for interview participants.</p> <p>The interview protocols were created based on the findings of a prior research study:</p> <p>Borchardt, R., Dawson, D., & Schultz, T. (2024). Financial and other perceived barriers to transitioning to an equitable no-publishing fee open access model: A survey of LIS journal editors. College & Research Libraries, 85(1). <a href="https://doi.org/10.5860/crl.85.1.96">https://doi.org/10.5860/crl.85.1.96</a></p> <p>The codebook was created iteratively based on the researchers' review and analysis of the interview transcripts.</p>
gEneSys Project - Systematic Literature on the Nexus between Gender and Energy Transition Database
<p>The present Dataset containes the data collected for the gEneSys Systematic Literature Review on the nexus between gender and energy transition. Data have been collected from 152 papers published between 2000 and 2023. The publications have been identified through an hoc research query and retrieved from the Web of Science Database.</p> <p>The dataset inscludes the following variables:</p> <ol> <li>Title of the publication, category of the categorization of Bell et al., 2020 (Political, Economic, Socio-Ecological, Technological).</li> <li>Cluster in which the publication has been included.</li> <li>Parts of the publication’s results about the nexus between gender and energy.</li> <li>Parts of the publication’s text about the gender gap assessed by the publication.</li> <li>Parts of the publication’s text about the gender gap identified to be bridged by future research.</li> <li>The type of the gender issue/s addressed by the publication. </li> <li>The type of the gender issue/s addressed by the publication. </li> <li>Technology/ies mentioned in the publication.</li> <li>The name of the country or countries studied by the publication.</li> <li>World Bank classification of the level of income of the country or countries studied by the publication.</li> <li>World Bank classification of the region of the country or countries studied by the publication.</li> <li>Spatial Context (e.g. international, national, inner-country, peri-urban, rural) of the country or countries studied by the publication.</li> <li>Research method employed in the publication (qualitative, quantitative, mixed).</li> <li>Specific qualitative, quantitative or mixed method or methods employed in the publication.</li> <li>Number of observations for the methods used.</li> <li>Parts of the publication’s text about the policy recommendations elaborated in the publication.</li> <li>If the publication mentions a pathway.</li> <li>Year of publication.</li> <li>Author/s surname and name initial. </li> <li>Author/s full surnames and names. </li> <li>Keywords chosen by the author/s. </li> <li>Abstract of the publication. </li> <li>Name of the source or journal. </li> <li>Type of publication. </li> <li>Category/ies identified by Web of Science. </li> <li>Publication’s language. </li> <li>Keywords identified by Web of Science. </li> <li>Number of references cited by the publication. </li> <li>Number of times the publication has been cited in Web of Science Core Database. </li> <li>Number of times the publication has been cited in Web of Science All Databases. </li> <li>Name of the publisher. </li> <li>Digital Object Identifier. </li> <li>Digital Object Identifier link. </li> <li>Publication’s number of pages. </li> <li>Web of Science citation index. </li> <li>Research area or areas of the publication. </li> <li>Web of Science Unique Identifier.</li> </ol>
Data for transition_matrices_plasticadrift
<p>Data belonging to the https://github.com/OceanParcels/transition_matrices_plasticadrift repository</p>
Supplementary material for "Palaeo-demographic modelling supports a population bottleneck during the Pleistocene-Holocene transition in Iberia"
<p>This Supplementary material encompasses the archaeological radiocarbon dates for the Iberian Peninsula analyzed in the article “<em>Palaeo-demographic modelling supports a population bottleneck during the Pleistocene-Holocene transition in Iberia</em>". Specifically:</p> <ul> <li>‘<strong>PALEODEM_dataset.csv</strong>’ provides the dataset in comma-separated format. Contains the compiled raw data of each radiocarbon date used by every analytical procedure.</li> <li>‘<strong>PALEODEM_sites.xlsx</strong>’ is a spreadsheet containing the basic information of each archaeological site analyzed in this work. The columns include ID_site, name of Archaeological site, n<sup>o</sup> of <sup>14</sup>C dates, n<sup>o</sup> of assemblages, Regional Unit of correspondence, and bibliographical Reference.</li> <li>‘<strong>REFERENCES for PALEODEM_sites.docx</strong>’ is a text archive that collects the bibliographical references listed in the above mentioned ‘Reference’ column, that have been the main sources of archaeological information.</li> </ul>
Global model results for transition potential
<p>Global model results including areas of high potential to transition from tree cover to tree cover loss to areas of low potential to transition. Values are unitless and range from 0–1.</p>
Regional model results (combined) for the six transition potentials (one for Africa, Australia, Asia, Europe, North America, and South America)
<p>Results for the six regional models showing areas of high potential to transition from tree cover to tree cover loss to areas of low potential to transition.</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.