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231
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ShareScore release 0.9.0
Dataset results
231 results for “dye”
Table S1. Dataset of the digitized dye molecules along with their experimental λmax
<p>Dye molecules provided by Eastman Chemical company along with their experimental maximum absorption wavelength</p>
DRET-DNA PAINT: using Dark dyes for fast super-resolution imaging
Open the record for dataset details and reuse information.
Comparison of Root End Sealing Ability of three Retrograde Filling Materials in Teeth with Root Apices Resected at 900 using dye penetration method under fluorescent microscope.
<p>Checking the depth of dye penetration and thereby evaluating the sealing ability of retrograde materials</p>
Isoacridone dyes with parallel reactivity from both singlet and triplet excited states for biphotonic catalysis and upconversion
<p>Raw data of the publication in Chem. Sci. titled "Isoacridone dyes with parallel reactivity from both singlet and triplet excited states for biphotonic catalysis and upconversion"</p>
Combining Topical Imiquimod 5% Cream With a Pulsed Dye Laser to Treat Port Wine Stain Birthmarks
ClinicalTrials.gov study NCT00585247. IPD Sharing: Not stated. Countries: 1. Publications: 1.
Comparison of Electrodessication, Potassium Titanyl Phosphate (KTP) Laser and Pulsed Dye Laser for Treatment of Cherry Angiomata
ClinicalTrials.gov study NCT00791908. IPD Sharing: Not stated. Countries: 1. Publications: 1.
Sentinel Lymph Node (SLN) Mapping with Charcoal Carbon Dye in Early Stage Cervical Cancer
ClinicalTrials.gov study NCT06697054. IPD Sharing: YES. Countries: 1. Publications: 4.
Pulsed Dye Laser Treatment and Oxymetazoline Hydrochloride (HCL) 1% Cream for Erythematotelangiectatic Rosacea
ClinicalTrials.gov study NCT04153188. IPD Sharing: NO. Countries: 1. Publications: 5.
Exploring the potential of biphenylamine and triphenylamine-based sensitizers for enhanced efficiency more than 8% in dye-sensitized solar cells
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Data for: Activation of bisulfite by LaFeO3 loaded on red mud for degradation of organic dye
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Electrochemically controlled switching of dyes for enhanced super-resolution optical fluctuation imaging (EC-SOFI)
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Far-red pentamethine cyanine dyes as fluorescent probes for detection of serum albumins
<p><span>Benzothiazole based cyanine dyes with bridged groups in pentamethine chain were studied as potential far-red fluorescent probes for protein detection. Spectral-luminescent properties were characterized for unbound dyes and in the presence of serum albumins (bovine (BSA), human (HSA), equine (ESA)), and globular proteins (β-lactoglobulin, ovalbumin). We have observed that the addition of albumins leads to a significant increase in dyes fluorescence intensity. However, the fluorescent response of dyes in the presence of other globular proteins was noticeably lower. The value of fluorescence quantum yield for dye bearing sulfonate group complexed with HSA amounted to 42% compared with 0.2 % for the free dye. The detection limit of HSA by this dye was about > 0.003 mg/ml that indicates the high sensitivity of dye to low HSA concentrations. Modeling of structure of the dyes complexes with albumin molecules was performed by molecular docking. According to these data, dyes could bind to up to five sites on the HSA molecule; the most preferable are the hemin-binding site in subdomain IB and <span>the dye-binding site in the pocket between subdomains IA, IIA, and IIIA.</span> This work confirms that pentamethine cyanine dyes could be proposed as powerful far-red fluorescent probes applicable for highly sensitive detection of albumins.</span></p>
Kinesin-1 activity recorded in living cells with a precipitating dye_FIB-SEM_data_2_part1
<p>Kinesin-1 activity recorded in living cells with a precipitating dye_FIB-SEM_data_2_part1</p>
Kinesin-1 activity recorded in living cells with a precipitating dye
<p>Raw Data and Protocols of the article 'Kinesin-1 activity recorded in living cells with a precipitating dye'.</p>
Kinesin-1 activity recorded in living cells with a precipitating dye_FIB-SEM_data_2_part2
<p>Kinesin-1 activity recorded in living cells with a precipitating dye_FIB-SEM_data_2_part2</p>
Synthesis of Bismuth Oxyhalide (BiOBrzI(1-z)) Solid Solutions for Photodegradation of Methylene Dye
<p>BiOBr<sub>z</sub>I<sub>(1-z)</sub> (0 ≤ z ≤ 1) materials were successfully prepared through hydrothermal method. Brunauer-Emmett-Teller (BET), transmission electron microscope (TEM), X-ray diffractometer (XRD), and scanning electron microscope (SEM) was used to determine the surface area, microstructure, crystal structure, and morphology of the resultant products. The photocatalytic performance of BiOBr<sub>z</sub>I<sub>(1-z)</sub> materials was examined through methylene blue (MB) degradation under ultraviolet (UV) light and solar irradiation. The XRD shows that BiOBr<sub>z</sub>I<sub>(1-z) </sub>materials crystallized into a tetragonal crystal structure with (102) peak slightly shifting to lower diffraction angle with increase in the amount of iodide (I<sup>-</sup>). BiOBr<sub>0.6</sub>I<sub>0.4 </sub>materials showed a point of zero charge of 5.29 and presented the highest photocatalytic activity in the removal of MB with 99 and 88% efficiency under solar and UV irradiation, respectively. The kinetics studies of MB removal by BiOBr<sub>z</sub>I<sub>(1-z) </sub>materials shows that the degradation process followed nonlinear pseudo-first-order model indicating that the removal of MB depends on the population of the adsorption sites. Trapping experiments confirmed that photogenerated holes (h<sup>+</sup>) and superoxide radicals (<sup>•</sup>O<sub>2</sub><sup>−</sup>) are the key species responsible for the degradation of MB. The experimental results agree with nonlinear fitting.</p>
Data for: Engineering A-type Dye-decolorizing Peroxidases by Modification of a Conserved Glutamate Residue
<p><span>Dye-decolorizing peroxidases (DyPs) are recently identified microbial enzymes that have been used in several Biotechnology applications from wastewater treatment to lignin valorization. However, their properties and mechanism of action still have many open questions. Their heme-containing active site is buried by three conserved flexible loops with a putative role in modulating substrate access and enzyme catalysis. Here, we investigated the role of a conserved glutamate residue in stabilizing interactions in loop 2 of A-type DyPs. First, we did site saturation mutagenesis of this residue, replacing it with all possible amino acids in bacterial DyPs from Bacillus subtilis (BsDyP) and from Kitasatospora aureofaciens (KaDyP1), the latter being characterized here for the first time. We screened the resulting libraries of variants for activity towards ABTS and identified variants with increased catalytic efficiency. The selected variants were purified and characterized for activity and stability. We furthermore used Molecular Dynamics simulations to rationalize the increased catalytic efficiency and found that the main reason is the electron channeling becoming easier from surface-exposed tryptophans. Based on our findings, we also propose that this glutamate could work as a pH switch in the wild-type enzyme, preventing intracellular damage. </span></p>
A singlet oxygen non-radical pathway for Rhodamine B dye degradation: Study on its stability, mechanism of degradation, and detoxification
<p><span>This study examined the degradation pathway of used face mask-derived carbon (UFMC) as a catalyst to activate peroxymonosulfate (PMS) without light sources and metal for Rhodamine B (RhB) dye degradation.</span><span> </span><span>The structural changes in the UFMC catalyst resulting from RhB degradation reduced its oxygen functionality and so reduced the rate of RhB dye degradation with each usage. </span><span>The structural changes of UFMC catalysts were confirmed by Fourier transform infrared, Raman, and X-ray photoelectron spectroscopy. The oxygen functionalities were involved in the generation of reactive oxygen species (ROS), in terms of singlet oxygen (<sup>1</sup>O<sub>2</sub>), which are involved in the RhB dye degradation mechanism. This was confirmed using paramagnetic resonance (EPR) spectroscopy and scavenging analyses. </span><span>Re-useability and stability investigations revealed the UFMC catalyst reached a minimum degradation percentage (38.8%) in the 5<sup>th</sup> cycle, confirming the complete utilization of UFMC functional groups for RhB dye degradation. </span><span>Finally, the ability to detoxify the RhB dye water was assessed using zebrafish (<em>Danio rerio) </em>with different RhB dye concentrations (2 to 6 mg/L), and 0 to 72 h of incubation at 26 °C and the<em> </em>yeast<em> </em>cells<em> (Saccharomyces cerevisiaetests)</em> harvested about 10<sup>7</sup> cells per mL for 24 h under shaking at 160 rpm at 30 °C. </span><span>Based on these results, the animal models were exposed to the RhB dye water, the significant changes in their growth were evident. However, treated with the RhB degraded water as a control, no developmental deformity was observed. This research employed the </span><span>UFM</span><span> derived carbon conveniently supported with PMS for dye removal application.</span></p>
Data S3_dye_screen_results_raw_data
<p>Raw data for paDSF screens (txt file).</p>
Movie_S1_dye_screen_visual_protocol
<p>Movie guide to dye screening and selection.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.