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FIG. 10 in Overview of Mitaraka survey: research frame, study site and field protocols
FIG. 10. — Process for active collecting: A, active collection of cricket (Orthoptera); B, photography of live specimens, important part of the process in some groups; C, preparation and management of the specimens for short term storage in the field laboratory; D, output of the active or selective methods: lower yields than broad-spectrum traps but a larger proportion is effectively studied. Photos: A, C, Xavier Desmier; B, Julien Touroult.
FIG. 12 in Overview of Mitaraka survey: research frame, study site and field protocols
FIG. 12. —Database and portals for entry, consultation and access to data, illustrated by means of a newly described Mitaraka species, Eupromera pascali Dalens, 2016 (Coleoptera, Cerambycidae): A, CardObs database entry interface (https://cardobs.mnhn.fr). The morphospecies name was initially entered as "Eupromera n. sp." in April 2015 and after publication (Feb. 2016), the morphospecies name was replaced by the species name, and the record was completed with publication reference and the collection deposit number; B, INPN French Natural Heritage consultation portal, displaying this species from the Mitaraka dataset (https://inpn.mnhn.fr/espece/cd_nom/814643/tab/rep/GUF); C, public interface to database of the Coleoptera collection (EC) of the MNHN illustrating the holotype and its labels, with full traceability (http://coldb.mnhn.fr/catalognumber/mnhn/ ec/ec7591); D, International GBIF Data Portal displaying the Coleoptera collection (EC) dataset of the MNHN (https://www.gbif.org/occurrence/1413051340).
FIG. 8 in Overview of Mitaraka survey: research frame, study site and field protocols
FIG. 8. — Active and passive substrate sampling: A, B, collection of dead branches infested with saproxylic larvae for "rearing" in emergence chambers (EXL); C, sampling soil litter for invertebrates with Winkler sieve (WS); D, spraying trunks with insecticide to collect small bark-dwelling arthropods that fall on the white sheet at the bottom of the trunk; E, searching for Annelida in soil samples collected with a spade; F, fish sampling in a small stream using rotenone. Photos: A, B, Stéphane Brûlé; C, Benoît Fontaine; D, Jürgen Schmidl; E, F, Xavier Desmier.
FIG. 7 in Overview of Mitaraka survey: research frame, study site and field protocols
FIG. 7. — Active collecting techniques: A, collecting butterflies with a net; B, sweeping vegetation (NS or SW) with a rugged sweep net; C, beating tray (BS), the vegetation is hit with a stick, which causes the arthropods to fall on the white nape mounted on a frame; D, searching for aquatic larvae with a rugged aquatic net; E, looking for butterfly caterpillars (Riodinidae and Lycaenidae) on liana flowers; F, visual search for reptiles, here with a Lachesis muta (Linnaeus, 1766) snake. Photos: A, B, C, E, Stéphane Brûlé; D, Nicolas Moulin; F, Xavier Desmier.
FIG. 3 in Overview of Mitaraka survey: research frame, study site and field protocols
FIG. 3. — Illustration of the landscape and main habitat types found in the Mitaraka study area: A, general landscape of the study area, with the drop zone visible in the foreground; B, inselberg "Sommet-en-Cloche" with bare rocks and transition forest; C, mosaic of forests and cambrouses; D, forest interior; E, swamp forest (bas-fond) with Euterpe oleracea Mart palm. Photos: Xavier Desmier, except B, Stéphane Brûlé.
FIG. 5 in Overview of Mitaraka survey: research frame, study site and field protocols
FIG. 5. — Passive interception traps: A, windowpane flight intercept trap (FIT) suspended over a fallen tree crown; B, 6 meter Malaise trap (MT) set up over a fallen tree near the Alama river; C, SLAM traps on an inselberg forest edge; D, a buprestid beetle (Buprestidae) trapped in artificial spider web (ASW). Photos: A, B, D, Julien Touroult; C, Stéphane Brûlé.
FIG. 4 in Overview of Mitaraka survey: research frame, study site and field protocols
FIG. 4. — Some of the collecting sites and techniques: A, drop zone forest clearing, with a high amount a freshly cut trees, and scattered SLAM traps; B, clearing, equiped with SLAM traps, automatic light trap and artificial spider web (ASW); C, active net collecting of butterflies on the "Sommet-en-Cloche" inselberg. Photos: A, B, Julien Touroult, C, Stéphane Brûlé.
FIG. 2 in Overview of Mitaraka survey: research frame, study site and field protocols
FIG. 2. — Mitaraka study area map with the four trails indicated (map by Maël Dewynter, map base by IGN and Parc amazonien de Guyane).
FIG. 6 in Overview of Mitaraka survey: research frame, study site and field protocols
FIG. 6. — Attractive traps: A, pink LED based automatic light trap (PVP) suspended at 15 m height close to a small canopy gap; B, light trap (LT) with light bulb of 125W and with white sheet, covered with moths at the end of a rainy night; C, colored pan traps (blue [BPT], white [WPT], and yellow [YPT]) at soil surface level to collect Diptera; D, fruit baited Coleoptera traps with banana nectar (BT), suspended in forest canopy; E, Nymphalidae butterfly trap (CHX), suspended in the forest canopy; F, tree equiped with ropes and baits composed of honey and tuna at different heights to attract ants; G, pitfall trap baited with dung (PFC) to collect coprophagous Scarabaeidae; H, Big Shot, a type of slingshot used to shoot ropes and suspend traps high up in the trees. Photos: A, B, G, H, Julien Touroult; C, Marc Pollet; F, Maurice Leponce; D, E, Stéphane Brûlé.
FIG. 11 in Overview of Mitaraka survey: research frame, study site and field protocols
FIG. 11. — Process flow for Diptera: A, each Diptera coordinator and taxonomic expert signs an agreement prior to receiving samples; B, sampling specimens with an array of methods (Malaise trap, pan traps, sweep net, SLAM trap); C, transporting of partly processed and unprocessed samples to the Belgian lab; D, sorting Diptera from complete samples and splitting the Diptera fraction into workable fractions (mostly on family level) for Diptera coordinators – taxonomic experts; E, processed Diptera fractions (Dolichopodidae, Empidoidea, Mycetophilidae, Phoridae); F, dissemination of workable fractions to Diptera coordinators – taxonomic specialists (10 in Europe, 5 in Canada, 8 in the USA, 10 in Brazil); G, examination and identification of specimens of workable fractions by the taxonomic expert (or further splitting of fractions by Diptera coordinator); H, commitments as part of the signed agreement (see Fig. 11A), with submission of identification file as first.
WCEbleedGen: A wireless capsule endoscopy dataset containing bleeding and non-bleeding frames
<p>WCEbleedGen is a wireless capsule endoscopy dataset containing bleeding and non-bleeding frames. The dataset promotes generalized comparison with existing state-of-the-art methods, and contribute to better interpretability, and reproducibility of such automated systems. </p><p>19-11-2023 Update : Multiple bleeding frames have been reannotated. New XML and YOLO-TXT have been added.</p>
Cutting the Frame: An In-Depth Look at the Hitchcock Computer Vision Dataset
<p>The Hitchcock Computer Vision Dataset is a comprehensive collection of annotated frames from fifteen Alfred Hitchcock films, created for the purpose of advancing research in film studies and digital humanities. The dataset leverages the power of Google's Vision API to provide detailed annotations such as object detection, facial recognition, web-entity analysis, explicit content filtering, and more. The dataset consists of a CSV file containing about 105,000 frames, uniformly extracted from the films using a time-based approach. Each frame is accompanied by metadata, including the film name, timestamp, and release year, allowing researchers to explore the evolution of Hitchcock's cinematic techniques and recurring themes.</p>
Figure 2. Frame from a in A Pulsing-Mirror Eye in a Deep-Sea Ostracod
Figure 2. Frame from a magnified video recording of a resting Gigantocypris sp. showing paired eyes only, anterior view. The mirrors appear silver; the layer of black, absorbing pigment beneath is not visible. A white-yellow light is back-reflected.
Supplementary data frames, AlphaFold models, Normal Mode Analysis (NMA) Data, and NMA of Corresponding NMR Ensembles in the S2RCI, MD, and S2 Datasets for "Gradations in protein dynamics captured by experimental NMR are not well represented by AlphaFold2 models and other computational metrics"
<h1><strong>Changes applied to V2</strong></h1> <p>In addition to the supplementary dataframes and AlphaFold models from each dataset in V1, V2 includes the additional data outlined below.</p> <p>The <strong>S2RCI</strong> and <strong>MD</strong> datasets include comprehensive analyses of AlphaFold2 models (both before and after truncation). These datasets feature: </p> <ul> <li><strong>AlphaFold2 Models</strong>: Both original and truncated structures. </li> <li><strong>WEBnma Modes</strong>: `modes.txt` files generated from WEBnma analysis, available for both non-truncated and truncated AF2 models. </li> <li><strong>Root-Mean-Square-Fluctuations (RMSF)</strong>: Profiles calculated before and after truncation of AF2 models. </li> <li><strong>NMR Data: Normal Mode Analysis (NMA)</strong>: Performed on corresponding NMR ensembles (see below). </li> </ul> <p> </p> <p>The <strong>NMR Data</strong> of NMA in these datasets includes: </p> <ul> <li>NMR ensembles </li> <li>Individual NMR models extracted from each ensemble </li> <li>STRIDE secondary structure calculations per-individual NMR models</li> <li>RMSF profiles per-individual NMR models</li> </ul> <p>For detailed information, please refer to the `Readme.txt` file within each corresponding folder. </p> <p>The <strong>S2 dataset</strong> includes all the features listed above, except for the NMR analysis.</p>
Coding frame and dataset for the study: Land-use governance: The interplay of social, market, and policy drivers – A global systematic review
<p>This file entails the coding frame and dataset used to conduct the systematic literature review "Land-use governance: The interplay of social, market, and policy drivers – A global systematic review".</p> <p>This study was first published as Chapter 2 of the PhD Dissertation "From soil to society - Rethinking governance for multifunctional land use and management" (Elsa L. Dingkuhn, 2025), and in a modified form in the journal Earth System Governance (Dingkuhn et al. 2025).</p> <p>The file consists of three sheets:<br>- Coding frame: Includes coding instructions and definitions used to extract and categorize the data.<br>- Variables: A list of dataset variables with explanations.<br>- List of included studies: The 81 studies from which the data was sourced.<br>- Data_List of observations: The dataset itself, consisting of 718 observations extracted from the included studies.</p>
Inferring cosmology from gravitational waves using non-parametric detector-frame mass distribution: Data Release
<p>Dataset release accompanying Inferring cosmology from gravitational waves using non-parametric detector-frame mass distribution.</p>
Dataset related to article"Globus Pallidus Internus Deep Brain Stimulation Using Frame-Based vs. Frameless Stereotaxy in Dystonia: A Single-Center Experience"
<p>Demographic, clinical (BFMDRS at baseline and in follow up), implantation (frame and frameless) data for the sample considered in the study.</p>
Influence of the imperfection direction on the strength of steel and stainless steel frames
<p>This file includes finite element simulation data (ultimate load factor) carried out on 60 steel and stainless steel frames, including regular and irregular frame configurations with different section sizes.</p>
Text-fig. 10. Progyrolepis heyleri POPLIN, 1999. a: dorsal lobe of the caudal fin with the fulcral scales along the dorsal edge of the lobe, GMC 55, whitened, scale bar 5 mm; b: basal fulcral scales from the dorsal edge of the caudal peduncle, G 123, whitened, scale bar 5 mm; c: fragment of the body of juvenile specimen with dorsal and anal fins, GMC 11, whitened, scale bar 5 mm; d: isolated scales from lateral side of the body, G 123, whitened, scale bar 5 mm; e: ridges on the scale surface, the frame delineates the area illustrated in (f) at higher magnification, G 123, scale bar 500 µm; f: details of the surface with microtubercles, scale bar 50 µm; g: isolated lepidotrichium of an adult specimen with very short and wide segments and with unsegmented basal part, GMC 101, whitened, scale bar 5 mm; h: large conical teeth from the internal row of the maxilla, G 123, scale bar 2 mm; i: microsculpture formed by elliptical proximo-distally elongated protuberances on the large conical tooth, G 123, scale bar 100 µm; j: large conical tooth from the internal row of the maxilla, G 123, scale bar 2 mm; k: microsculpture formed by elliptical proximo-distally elongated protuberances on the large conical tooth, G 123, scale bar 100 µm. in New Actinopterygians From The Permian Of The Brive Basin, And The Ichthyofaunas Of The French Massif Central
Text-fig. 10. Progyrolepis heyleri POPLIN, 1999. a: dorsal lobe of the caudal fin with the fulcral scales along the dorsal edge of the lobe, GMC 55, whitened, scale bar 5 mm; b: basal fulcral scales from the dorsal edge of the caudal peduncle, G 123, whitened, scale bar 5 mm; c: fragment of the body of juvenile specimen with dorsal and anal fins, GMC 11, whitened, scale bar 5 mm; d: isolated scales from lateral side of the body, G 123, whitened, scale bar 5 mm; e: ridges on the scale surface, the frame delineates the area illustrated in (f) at higher magnification, G 123, scale bar 500 µm; f: details of the surface with microtubercles, scale bar 50 µm; g: isolated lepidotrichium of an adult specimen with very short and wide segments and with unsegmented basal part, GMC 101, whitened, scale bar 5 mm; h: large conical teeth from the internal row of the maxilla, G 123, scale bar 2 mm; i: microsculpture formed by elliptical proximo-distally elongated protuberances on the large conical tooth, G 123, scale bar 100 µm; j: large conical tooth from the internal row of the maxilla, G 123, scale bar 2 mm; k: microsculpture formed by elliptical proximo-distally elongated protuberances on the large conical tooth, G 123, scale bar 100 µm.
Text-fig. 4. Briveichthys chantepieorum gen. et sp. nov. a, b: photograph and drawing of the parasphenoid in dorsal view, GMC 15, whitened, scale bars 5 mm; c: maxillary plate in medial view with horizontal lamina along the ventral edge of the bone, segment of the lower jaw with assembly of large slender teeth of the inner row and coronoids with small teeth, GMC 15, whitened, scale bar 5 mm; d: detail of the sculpture on the maxilla and dentalosplenial, GMC 126, whitened, scale bar 5 mm; e: detail of the teeth of the inner and outer row and coronoids on the lower jaw, the frame delineates the area illustrated in (f) at higher magnification, GMC 15, scale bar 2 mm; f: microsculpture formed by elliptical proximo-distally elongated protuberances on the large conical teeth, GMC 15, scale bar 100 µm; g: small fringing fulcra tightly attached to the anterior edge of a lepidotrichium, individual fulcral scales are indicated by arrows, GMC 18, scale bar 2 mm. Abbreviation: bhf – bucco-hypophysial foramen, Cor – coronoids, cp – corpus parasphenoidis, De – dentalosplenial, hl – horizontal lamina, mc – pores of the mandibular sensory canal, Mx – maxilla, paa – processus ascendens anterior, pap – processus ascendens posterior. in New Actinopterygians From The Permian Of The Brive Basin, And The Ichthyofaunas Of The French Massif Central
Text-fig. 4. Briveichthys chantepieorum gen. et sp. nov. a, b: photograph and drawing of the parasphenoid in dorsal view, GMC 15, whitened, scale bars 5 mm; c: maxillary plate in medial view with horizontal lamina along the ventral edge of the bone, segment of the lower jaw with assembly of large slender teeth of the inner row and coronoids with small teeth, GMC 15, whitened, scale bar 5 mm; d: detail of the sculpture on the maxilla and dentalosplenial, GMC 126, whitened, scale bar 5 mm; e: detail of the teeth of the inner and outer row and coronoids on the lower jaw, the frame delineates the area illustrated in (f) at higher magnification, GMC 15, scale bar 2 mm; f: microsculpture formed by elliptical proximo-distally elongated protuberances on the large conical teeth, GMC 15, scale bar 100 µm; g: small fringing fulcra tightly attached to the anterior edge of a lepidotrichium, individual fulcral scales are indicated by arrows, GMC 18, scale bar 2 mm. Abbreviation: bhf – bucco-hypophysial foramen, Cor – coronoids, cp – corpus parasphenoidis, De – dentalosplenial, hl – horizontal lamina, mc – pores of the mandibular sensory canal, Mx – maxilla, paa – processus ascendens anterior, pap – processus ascendens posterior.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.