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123
datasets available to search
ShareScore release 0.9.0
Dataset results
123 results for “hydroxymethylation”
RNA-seq and DNA methylation and hydroxymethylation profiles in sensitive and treatment-resistant cancer cell lines
GEO Series GSE128686. Homo sapiens. 51 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by array.
Tet-dependent 5-hydroxymethyl-Cytosine modification of mRNA regulates the axon guidance genes robo2 and slit in Drosophila [ChIP Embryo]
GEO Series GSE225969. Drosophila melanogaster. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 [RNA-Seq]
GEO Series GSE87748. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
Tet-dependent 5-hydroxymethyl-Cytosine modification of mRNA regulates axon guidance genes in Drosophila
GEO Series GSE225980. Drosophila melanogaster. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Genome-wide comparison of DNA hydroxymethylation in mouse embryonic stem cells and neural progenitor cells by relative quantitative hMeDIP-seq
GEO Series GSE40810. Mus musculus. 4 samples. Type: Methylation profiling by high throughput sequencing.
Tobacco smoking induces changes in true DNA methylation, hydroxymethylation and gene expression in bronchoalveolar lavage cells
GEO Series GSE133062. Homo sapiens. 70 samples. Type: Methylation profiling by array.
The chromatin remodeler Lsh modulates genome-wide cytosine hydroxymethylation
GEO Series GSE110129. Mus musculus. 4 samples. Type: Methylation profiling by high throughput sequencing.
5-hydroxymethylated biomarkers in cell-free DNA predict occult colorectal cancer up to 36 months prior to diagnosis in the PLCO Cancer Screening Trial
GEO Series GSE263030. Homo sapiens. 602 samples. Type: Other.
Whole‐Genome Differentially Hydroxymethylated DNA Regions among Twins Discordant for Cardiovascular Death
GEO Series GSE181418. Homo sapiens. 76 samples. Type: Methylation profiling by high throughput sequencing.
Dynamics of DNA hydroxymethylation and methylation during mouse embryonic and germline development
GEO Series GSE186357. Mus musculus. 209 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
RNA transcriptome in Drosophila melanogaster embryos mutant for serine hydroxymethyl transferase (SHMT)
GEO Series GSE97557. Drosophila melanogaster. 12 samples. Type: Expression profiling by high throughput sequencing.
Intronic Non-CG DNA Hydroxymethylation and Alternative mRNA Splicing in Honey Bees
GEO Series GSE50990. Apis mellifera; Apis mellifera scutellata. 8 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
DNA Methylation and Hydroxymethylation Levels in Patients With Coronary Heart Disease
ClinicalTrials.gov study NCT03462277. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Hydroxymethylation, Incident Type 2 Diabetes and Incident Obesity
ClinicalTrials.gov study NCT05769439. IPD Sharing: NO. Countries: 1. Publications: 0.
A Study To Estimate The Effects Of Food On Drug Fesoterodine Fumarate And The Pharmacokinetics Of 5-Hydroxymethyl Tolterodine (5-HMT) In Healthy Volunteers
ClinicalTrials.gov study NCT01566760. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Altered Hydroxymethylation is seen at regulatory regions in pancreatic cancer and regulates oncogenic pathways [RNA-seq]
GEO Series GSE97003. Homo sapiens. 11 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide DNA hydroxymethylation changes are associated with neurodevelopmental genes in the developing human brain
GEO Series GSE40539. Homo sapiens. 1 samples. Type: Methylation profiling by high throughput sequencing.
DNA Cytosine Hydroxymethylation Levels Are Distinct Among Peripheral Blood Leukocytes
GEO Series GSE70519. Homo sapiens. 7 samples. Type: Methylation profiling by high throughput sequencing.
Restoration of genome-wide 5-hydroxymethylation by azacitidine and ascorbate in TET2-deficient human pre-leukemic HSPCs
GEO Series GSE198908. Homo sapiens. 326 samples. Type: Expression profiling by high throughput sequencing; Other.
Parallel profiling of DNA methylation and hydroxymethylation highlights neuropathology-associated epigenetic variation in Alzheimer's disease.
GEO Series GSE105109. Homo sapiens. 384 samples. Type: Methylation profiling by genome tiling array.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.