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137 results for “long distance dispersal”
Data from: Influence of paleolithic range contraction, admixture and long-distance dispersal on genetic gradients of modern humans in Asia
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Data to support publication figures and animation scripts at GitHub: Modeling weather-driven long-distance dispersal of spruce budworm moths (Choristoneura fumiferana)
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Global expansion of a solitary-social tropical spitting spider shaped by multiple long-distance dispersals
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Data from: Assembling a late-successional lichen community by long-distance dispersal: Lessons for restoration
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Intercontinental long‐distance seed dispersal across the Mediterranean Basin explains population genetic structure of a bird‐dispersed shrub
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Data from: Which frugivory‐related traits facilitated historical long‐distance dispersal in the custard apple family (Annonaceae)?
Aim Long-distance dispersal has contributed to the disjunct biogeographical distribution of rain forest plants – something that has fascinated biogeographers since Humboldt's time. However, the dispersal 'agent' for these tropical plant lineages remains puzzling. Here, we investigate which frugivory-related traits may have facilitated past intercontinental long-distance dispersal in the custard apple family (Annonaceae), a major vertebrate-dispersed tropical plant family. We hypothesize that long-distance dispersal was associated with the evolution of traits related to dispersal by large-bodied mammals (e.g. large, dull-coloured, 'megafaunal' fruits) and strong-flying, ocean-crossing birds and bats (e.g. dehiscent, moniliform or cauliflorous fruits). Location Global Taxon Annonaceae Methods We used a fossil-calibrated phylogenetic framework to infer the biogeographic history of 234 Annonaceae species (10%, covering nearly all genera) in relation to the evolution of 15 frugivory-related traits, using maximum likelihood and Bayesian inferences. Furthermore, we used linear and generalized linear models and phylogenetic simulations to test whether ancestral fruit traits during intercontinental dispersal were different from those of other lineages not involved in long-distance dispersal. Results We inferred the ancestral Annonaceae fruits to be small with a single or few small seeds and a small number of fruitlets. These fruits were most probably apocarpous, indehiscent and/or moniliform (i.e. long beads of fruitlets). Furthermore, most of the long-distance dispersal events in Annonaceae occurred via the expanded tropical forests in the Early Cenozoic ('geodispersal'), and were significantly associated with large (c. 3 cm long), dull-coloured fruits, and short stipes. Additionally, long-distance dispersal was also facilitated by dehiscent, moniliform and non-cauliflorous fruits. Main conclusions We suggest that the evolution of frugivory-related traits associated with dispersal by frugivores that frequently move across large distances and/or barriers, such as large-bodied mammals and strong-flying birds, has contributed to the disjunct tropical biogeographical distribution of Annonaceae, and probably of tropical rain forest plants more generally.
Data from: Covariation in abscission force and terminal velocity of wind-borne sibling seeds alters long distance dispersal projections
1. Despite the fact that seeds are unlikely to be identical—even among siblings within a maternal individual—dispersal models typically use one mean trait value to represent the ability of an entire species to disperse. Previous work has shown that the environmental conditions under which individuals leave the maternal site strongly affect how far seeds will travel. However, less is known about how trait variation within individuals contributes to dispersal or how such variation might interact with abiotic factors. 2. Here, we develop the use of an ergometer in a novel application to investigate variation in seed traits, specifically the force required for seed abscission and seed terminal velocity, exhibited by seeds from different locations within maternal capitula of the invasive species Carduus nutans (Asteraceae). 3. We find that seeds from the center of capitula are significantly easier to liberate and have slower falling velocities than siblings found near the edge of capitula. When abscission force is positively correlated with terminal velocity, slowly falling, easily abscised seeds are projected to travel much further than the average seed on slow winds. 4. Our experimental and theoretical results, which together show that within-individual variation can strongly affect model projections of species dispersal, have important implications for our broader understanding of population spread rates, the spatial structure of populations, metapopulation connectivity, and gene flow in the landscape.
Data from: Genotyping by sequencing reveals contrasting patterns of population structure, ecologically mediated divergence and long-distance dispersal in North American palms
Comparative studies can provide powerful insights into processes that affect population divergence and thereby help to elucidate the mechanisms by which contemporary populations may respond to environmental change. Furthermore, approaches such as genotyping by sequencing (GBS) provide unprecedented power for resolving genetic differences among species and populations. We therefore used GBS to provide a genome-wide perspective on the comparative population structure of two palm genera, Washingtonia and Brahea, on the Baja California peninsula, a region of high landscape and ecological complexity. First, we used phylogenetic analysis to address taxonomic uncertainties among five currently recognised species. We resolved three main clades, the first corresponding to W. robusta and W. filifera, the second to B. brandegeei and B. armata, and the third to B. edulis from Guadalupe Island. Focusing on the first two clades, we then delved deeper by investigating the underlying population structure. Striking differences were found, with GBS uncovering four distinct Washingtonia populations and identifying a suite of loci associated with temperature, consistent with ecologically mediated divergence. By contrast, individual mountain ranges could be resolved in Brahea and few loci were associated with environmental variables, implying a more prominent role of neutral divergence. Finally, evidence was found for long-distance dispersal events in Washingtonia but not Brahea, in line with knowledge of the dispersal mechanisms of these palms including the possibility of human-mediated dispersal. Overall, our study demonstrates the power of GBS together with a comparative approach to elucidate markedly different patterns of genome-wide divergence mediated by multiple effectors.
Data from: Does long distance pollen dispersal preclude inbreeding in tropical trees? Fragmentation genetics of Dysoxylum malabaricum in an agro-forest landscape
Tropical trees often display long distance pollen dispersal, even in highly fragmented landscapes. Understanding how patterns of spatial isolation influence gene flow and interact with background patterns of fine scale spatial genetic structure are critical for evaluating the genetic consequences of habitat fragmentation. In the endangered tropical timber tree Dysoxylum malabaricum (Meliaceae) we apply eleven microsatellite markers with paternity and parentage analysis to directly estimate contemporary gene flow across a large area (216 km2) in a highly fragmented agro-forest landscape. A comparison of genetic diversity and genetic structure in adult and juvenile life stages indicates an increase of differentiation and fine-scale spatial genetic structure (FSGS) over time. Paternity analysis and parentage analysis demonstrate high genetic connectivity across the landscape by pollen dispersal. A comparison between mother trees in forest patches with low and high densities of adult trees shows that the frequency of short distance mating increases, as does average kinship among mates in low density stands. We interpret this as an early warning sign of potentially negative genetic consequences of forest fragmentation. Single isolated trees, in contrast, frequently receive heterogeneous pollen from distances exceeding five kilometres. We discuss the processes leading to the observed patterns of gene flow and the implications of this for conservation management of D. malabaricum and tropical trees more generally.
Global diversification of Anelosimus spiders driven by long distance overwater dispersal and Neogene climate oscillations
Vicariance and dispersal events, combined with intricate global climatic history, have left an imprint on the spatiotemporal distribution and diversity of many organisms. Anelosimus cobweb spiders (Theridiidae), are solitary-social organisms with a cosmopolitan distribution in temperate- to-tropical areas. Their evolutionary history and the discontinuous distribution of species richness suggest that 1) long distance overwater dispersal, and 2) climate change during the Neogene (23–2.6 Ma), may be major factors in explaining their distribution and diversification. Here we test these hypotheses, and explicitly test if global Miocene/Pliocene climatic cooling in the last 8 Ma affected Anelosimus radiation in parallel in South America and Madagascar. To do so, we investigate the phylogeny and spatiotemporal biogeography of Anelosimus through a culmination of a 20-year comprehensive global sampling at the species level (69 species, including 84% of the known 75 species worldwide, represented by 268 individuals) using nucleotide data from seven loci (5.5 kb). Our results strongly support the monophyly of Anelosimus with an Oligocene (~30 Ma) South American origin. Major clades on other continents originate via multiple, long-distance dispersal events, of solitary or subsocial—but not social—lineages, from the Americas. These intercontinental dispersals were to Africa, Madagascar (twice), and SE Asia/Australasia. The early diversification of Anelosimus spiders coincides with a sudden thermal increase in the late Oligocene (~27–25 Ma), though no causal connection can be made. Our results, however, strongly support the hypothesis that global Neogene climatic cooling in the last 8 Ma drove Anelosimus radiation in parallel in S. America and Madagascar, offering a rare empirical evidence for diversification of a socially diverse group driven by an interplay between long distance dispersal and global Neogene climatic changes.
Data from: Exploring potential establishment of marine rafting species after transoceanic long-distance dispersal
Aim On March 11, 2011, the Great East Japan Earthquake triggered a massive tsunami that resulted in the largest known rafting event in recorded history. By spring 2012, marine debris began washing ashore along the Pacific Coast of the U.S. and Canada with a wide-range of Asian coastal species attached. We used this unique dataset, where the source region, date of dislodgment, and landing location are known, to assess the potential for species invasions by transoceanic rafting on marine debris. Location Northeast Pacific from 20 to 60°N Time period Current Major taxa studied Forty-eight invertebrate and algal species recorded on Japanese tsunami marine debris. Methods We developed Maximum Entropy (MaxEnt) species distribution models for 48 species recorded on Japanese tsunami marine debris to predict establishment potential along the Pacific Coast from 20-60°N. Models were compared within the context of historical marine introductions from Japan to this region to validate the emergence of marine debris as a novel vector for species transfer. Results Overall, 27% (13 species) landed with debris at locations with suitable environmental conditions for establishment and survival, indicating that these species may be able to establish new populations or introduce greater genetic diversity to already established non-native populations. A further 22 species have environmental match in areas where tsunami debris likely landed, but was not extensively sampled. Nearly 100 Japanese marine species previously invaded the northeastern Pacific, demonstrating this region's environmental suitability for rafting Japanese biota. Historical invasions from Asia are highest in California and largely known from bays and harbors. Main conclusions Marine debris is a novel and growing vector for non-native species introduction. By utilizing a unique dataset of Japanese tsunami marine debris species, our predictive models show capacity for new transoceanic invasions and can focus monitoring priorities to detect successful long-distance dispersal across the world's oceans.
Data from: Long-distance dispersal suppresses introgression of local alleles during range expansions
During range expansions, even low levels of interbreeding can lead to massive introgression of local alleles into an invader's genome. Nonetheless, this pattern is not always observed in human populations. For instance, European Americans in North America are barely introgressed by Amerindian genes in spite of known contact and admixture. With coalescent spatially explicit simulations, we examined the impact of long-distance dispersal (LDD) events on introgression of local alleles into the invading population using a set of different demographic scenarios applicable to a diverse range of natural populations and species. More specifically, we consider two distinct LDD models: one where LDD events originate in the range core and targets only the expansion front and a second one where LDD events can occur from any area to any other. We find that LDD generally prevents introgression, but that LDD events specifically targeting the expansion front are most efficient in suppressing introgression. This is likely due to the fact that LDD allows for the presence of a larger number of invader alleles at the wave front, where effective population size is thus increased and local introgressed alleles are rapidly outnumbered. We postulate that the documented settlement of pioneers directly on the wave front in North America has contributed to low levels of Amerindian admixture observed in European Americans and that this phenomenon may well explain the lack of introgression after a range expansion in natural populations without the need to evoke other mechanisms such as natural selection.
Data from: Long-distance dispersal maximizes evolutionary potential during rapid geographic range expansion
Conventional wisdom predicts that sequential founder events will cause genetic diversity to erode in species with expanding geographic ranges, limiting evolutionary potential at the range margin. Here, we show that invasive European starlings (Sturnus vulgaris) in South Africa preserve genetic diversity during range expansion, possibly as a result of frequent long-distance dispersal events. We further show that unfavourable environmental conditions trigger enhanced dispersal, as indicated by signatures of selection detected across the expanding range. This brings genetic variation to the expansion front, counterbalancing the cumulative effects of sequential founding events and optimizing standing genetic diversity and thus evolutionary potential at range margins during spread. Therefore, dispersal strategies should be highlighted as key determinants of the ecological and evolutionary performances of species in novel environments and in response to global environmental change.
Data from: High levels of effective long-distance dispersal may blur ecotypic divergence in a rare terrestrial orchid
Background: Gene flow and adaptive divergence are key aspects of metapopulation dynamics and ecological speciation. Long-distance dispersal is hard to detect and few studies estimate dispersal in combination with adaptive divergence. The aim of this study was to investigate effective long-distance dispersal and adaptive divergence in the fen orchid (Liparis loeselii (L.) Rich.). We used amplified fragment length polymorphism (AFLP)-based assignment tests to quantify effective long-distance dispersal at two different regions in Northwest Europe. In addition, genomic divergence between fen orchid populations occupying two distinguishable habitats, wet dune slacks and alkaline fens, was investigated by a genome scan approach at different spatial scales (continental, landscape and regional) and based on 451 AFLP loci. Results: We expected that different habitats would contribute to strong divergence and restricted gene flow resulting in isolation-by-adaptation. Instead, we found remarkably high levels of effective long-distance seed dispersal and low levels of adaptive divergence. At least 15% of the assigned individuals likely originated from among-population dispersal events with dispersal distances up to 220 km. Six (1.3%) 'outlier' loci, potentially reflecting local adaptation to habitat-type, were identified with high statistical support. Of these, only one (0.22%) was a replicated outlier in multiple independent dune-fen population comparisons and thus possibly reflecting truly parallel divergence. Signals of adaptation in response to habitat type were most evident at the scale of individual populations. Conclusions: The findings of this study suggest that the homogenizing effect of effective long-distance seed dispersal may overwhelm divergent selection associated to habitat type in fen orchids in Northwest Europe.
Data from: Habitat features and long-distance dispersal modify the use of social information by a long-distance migratory bird
1. The processes by which individuals select breeding sites have important consequences for individual tness as well as population- and community-dynamics. Although there is increasing evidence that many animal species use information acquired from conspecics to assess the suitability of potential breeding sites, little is known about how the use of this social information is modified by biotic and abiotic conditions. 2. We used an automated playback experiment to simulate two types of social information, post-breeding public information and pre-breeding location cues, to determine the relative importance of these cues for breeding site selection by a migratory songbird, the American redstart (Setophaga ruticilla). In addition, we used stable hydrogen isotopes to determine the dispersal status of individuals that responded to our experimental treatments and quantify whether long-distance dispersers use different social cues to select breeding sites compared to philopatric individuals. 3. We found that points that received pre-breeding location cue treatments were signi cantly more likely to be settled by redstarts than control points that received no playback. However, we found no evidence the redstarts used post-breeding public information gathered during one season to select breeding sites the following year. Breeding site habitat structure was also a strong predictor of settlement probability, indicating that redstarts modi ed the use of social information based on habitat cues. Furthermore, stable hydrogen isotope signatures from individuals that responded to location cue treatments suggest that long-distance dispersers may rely more heavily on these cues than local recruits. 4. Collectively, these results indicate that redstarts use multiple sources of information to select breeding sites, which could buffer individuals from selecting suboptimal sites when they breed in unfamiliar locations or when habitat quality becomes decoupled from social cues.
Data from: Combined genetic and telemetry data reveal high rates of gene flow, migration, and long-distance dispersal potential in Arctic ringed seals (Pusa hispida)
Ringed seals (Pusa hispida) are broadly distributed in seasonally ice covered seas, and their survival and reproductive success is intricately linked to sea ice and snow. Climatic warming is diminishing Arctic snow and sea ice and threatens to endanger ringed seals in the foreseeable future. We investigated the population structure and connectedness within and among three subspecies: Arctic (P. hispida hispida), Baltic (P. hispida botnica), and Lake Saimaa (P. hispida saimensis) ringed seals to assess their capacity to respond to rapid environmental changes. We consider (a) the geographical scale of migration, (b) use of sea ice, and (c) the amount of gene flow between subspecies. Seasonal movements and use of sea ice were determined for 27 seals tracked via satellite telemetry. Additionally, population genetic analyses were conducted using 354 seals representative of each subspecies and 11 breeding sites. Genetic analyses included sequences from two mitochondrial regions and genotypes of 9 microsatellite loci. We found that ringed seals disperse on a pan-Arctic scale and both males and females may migrate long distances during the summer months when sea ice extent is minimal. Gene flow among Arctic breeding sites and between the Arctic and the Baltic Sea subspecies was high; these two subspecies are interconnected as are breeding sites within the Arctic subspecies.
Data from: Genetic evidence for high propagule pressure and long-distance dispersal in monk parakeet (Myiopsitta monachus) invasive populations
The monk parakeet (Myiopsitta monachus) is a successful invasive species that does not exhibit life history traits typically associated with colonizing species (e.g., high reproductive rate or long-distance dispersal capacity). To investigate this apparent paradox, we examined individual and population genetic patterns of microsatellite loci at one native and two invasive sites. More specifically, we aimed to evaluate the role of propagule pressure, sexual monogamy, and long-distance dispersal in monk parakeet invasion success. Our results indicate little loss of genetic variation at invasive sites relative to the native site. We also found strong evidence for sexual monogamy from patterns of relatedness within sites, and no definite cases of extra-pair paternity in either the native site sample or the examined invasive site. Taken together, these patterns directly and indirectly suggest that high propagule pressure has contributed to monk parakeet invasion success. In addition, we found evidence for frequent long-distance dispersal at an invasive site (~100km) that sharply contrasted with previous estimates of smaller dispersal distance made in the native range (~2km), suggesting long-range dispersal also contributes to the species' spread within the United States. Overall, these results add to a growing body of literature pointing to the important role of propagule pressure in determining, and thus predicting, invasion success, especially for species whose life history traits are not typically associated with invasiveness.
Data from: Phylogeography of western Mediterranean Cymbalaria (Plantaginaceae) reveals two independent long-distance dispersals and entails new taxonomic circumscriptions
The Balearic Islands, Corsica and Sardinia (BCS) constitute biodiversity hotspots in the western Mediterranean Basin. Oligocene connections and long distance dispersal events have been suggested to cause presence of BCS shared endemic species. One of them is Cymbalaria aequitriloba, which, together with three additional species, constitute a polyploid clade endemic to BCS. Combining amplified fragment length polymorphism (AFLP) fingerprinting, plastid DNA sequences and morphometrics, we inferred the phylogeography of the group and evaluated the species' current taxonomic circumscriptions. Based on morphometric and AFLP data we propose a new circumscription for C. fragilis to additionally comprise a group of populations with intermediate morphological characters previously included in C. aequitriloba. Consequently, we suggest to change the IUCN category of C. fragilis from critically endangered (CR) to near threatened (NT). Both morphology and AFLP data support the current taxonomy of the single island endemics C. hepaticifolia and C. muelleri. The four species had a common origin in Corsica-Sardinia, and two long-distance dispersal events to the Balearic Islands were inferred. Finally, plastid DNA data suggest that interspecific gene flow took place where two species co-occur.
FIGURE 8. Bothridia a in New species of Crotonia (Acari: Oribatida: Crotoniidae) from Lord Howe and Norfolk Islands: further evidence of long-distance dispersal events in the biogeography of a genus of Gondwanan relict oribatid mites
FIGURE 8. Bothridia a) Crotonia gorgonia sp. nov.; b) Crotonia norfolkensis sp. nov.; c) Crotonia utricularia sp. nov.
FIGURE 6 in Endemism and long distance dispersal in the waterfleas of Easter Island
FIGURE 6. Late Pleistocene-Early Holocene Daphnia ephippia from Easter Island. Daphnia (Ctenodaphnia) sp. Unidentified fossil ephippium from Rano Raraku Lake (IBB-98 in Cañellas-Boltà et al. 2012; images by N. Cañellas-Boltà, with permission), same ephippium, different illumination. Scale bar 0.5mm.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.