Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
137
datasets available to search
ShareScore release 0.7.1
Dataset results
137 results for “mixing models”
Consensus nucleotide sequences for env and gag for paper: Insights to HIV-1 coreceptor usage by estimating HLA adaptation with Bayesian generalized linear mixed models
<p>This is the consensus sequence repository to the manuscript "Insights to HIV-1 coreceptor usage by estimating HLA adaptation with Bayesian generalized linear mixed models".<br> It contains the 10% consensus nucleotide sequences of the env and gag (only p24) protein of HIV-1 used for the training and leftout data set. The NGS sequences are available under BioProject ID PRJNA810303 and the corresponding BioSample Accession IDs are SAMN26241863:26242168 and SAMN28728524:SAMN28728529</p> <ul> <li>env_leftout.fasta <ul> <li>A fasta file that contains the consensus nucleotide sequences for the env protein for the leftout data set</li> </ul> </li> <li>env_nt_274.fasta <ul> <li>A fasta file that contains the consensus nucleotide sequences for the env protein for the training data set</li> </ul> </li> <li>gag_leftout.fasta <ul> <li>A fasta file that contains the consensus nucleotide sequences for the gag protein for the leftout data set</li> </ul> </li> <li>gag_nt_274.fasta <ul> <li>A fasta file that contains the consensus nucleotide sequences for the gag protein for the training data set</li> </ul> </li> </ul>
SESMG scenario-files of the study "Model-based run-time and memory reduction for a mixed-use multi-energy system model with high spatial resolution"
<p>This dataset contains model scenario-files belonging to the publication "Model-based run-time and memory reduction for a mixed-use multi-energy system model with high spatial resolution".</p> <p>The individual scenarios can be executed and evaluated with the "Spreadsheet Energy System Model Generator" (<a href="https://github.com/chrklemm/SESMG">SESMG</a>) <a href="https://github.com/chrklemm/SESMG/tree/v0.4.0rc1">v0.4.0rc1</a></p> <p>The respective file names indicate to which model run mentioned in the main study the scenario-files belong. For model runs for which no sepparate scenario file exists, the scenario "reference.xlsx" with adjusted SESMG settings was used.</p> <p> </p>
Model data to investigate wood frog abundance in 17-year post harvest variable retention mixed wood forests
<p>Variable retention forest harvesting aims to reduce negative effect of harvesting on forest biodiversity, but its effectiveness is not well understood for many taxa. To better understand the effects of variable retention forest management and environmental features on amphibians, we used pitfall traps to capture wood frogs (<em>Lithobates sylvaticus</em>) across 4 levels of retention harvest (clearcut [0%], 20%, 50%, and unharvested control [100%]), and 2 forest types (deciduous and coniferous), in 17-year post-harvest forests in northwest Alberta. We mapped breeding sites and used a terrain moisture index (Depth-to-Water) derived from airborne LiDAR to examine relationships between relative abundance, breeding site proximity and soil moisture. Retention level alone had no effect on relative abundance, but in late summer (July and August) there was a significant interaction between retention level and forest type: capture rates decreased with amount of retention for deciduous forests, but increased with amount of retention in conifer forests. During late summer, capture rates were higher in conifer forests than in deciduous forests, with soil moisture (lower Depth-to-Water) positively related to capture rates. Though timber retention may be beneficial to wood frogs in the short-term, any impacts of forest harvesting on wood frog abundance was undetectable in stands 17 years post-harvest. </p>
Comparing mixed models and Random Forest association tests using naturalGWAS and a Striped Bass SNP dataset
<p>In this study, we used the phenotype simulation package naturalGWAS to test the performance of Zhao's Random Forest method in comparison to an uncorrected Random Forest test, latent factor mixed models (LFMM), genome-wide efficient mixed models (GEMMA), and confounder adjusted linear regression (CATE). We created 400 sets of phenotypes, corresponding to five effect sizes and 2, 5, 15, or 30 causal loci, simulated from two empirical datasets containing SNPs from Striped Bass representing three and 13 populations. All association methods were evaluated for their ability to detect genotype-phenotype associations based on power, false discovery rates, and number of false positives. Genomic inflation was highest for uncorrected Random Forest and LFMM tests and lowest for Gemma and Zhao's Random Forest. All association tests had similar power to detect causal loci, and Zhao's Random Forest had the lowest false discovery rate in all scenarios. To measure the performance of association tests in small datasets with few loci surrounding a causal gene we also ran analyses again after removing causal loci from each dataset. All association tests were only able to find true positives, defined as loci located within 30k bp of a causal locus, in 3%–18% of simulations. In contrast, at least one false positive was found in 17%–44% of simulations. Zhao's Random Forest again identified the fewest false positives of all association tests studied. The ability to test the power of association tests for individual empirical datasets can be an extremely useful first step when designing a GWAS study.</p>
Glacial ice sheet extent effects on tidal mixing and the global overturning circulation - Model Output
<p>This dataset contains the output from the tide model and climate model simulations from the publication Wilmes et al. (2018) "Glacial ice sheet extent effects on tidal mixing and the global overturning circulation" submitted to Paleoceanography. The user is referred to the paper for details on the methodology.</p> <p>Dissipation files:</p> <p>Files beginning with "diss" contain tidal dissipation files calculated from the OTIS tide model output at 1/8th deg using the direct method. Files with the M2 constituent only are in .mat format and extend from 86deg S to 89deg N whereas the files containing all constituents (M2, S2, K1 and O1) are in netcdf format and extend from 90deg S to 90deg N. These files regridded and are used as the climate model tidal forcing.</p> <p>Dissipation file list:</p> <p>diss_dir_ze_1_8_rtp_21kyrBP_i6g_-I1.5_-t_8299008.nc Dissipation for LGM ICE-6G ZE ITdrag 1/8th deg<br> diss_dir_ze_1_8_rtp_21kyrBP_i5g_-I1.5_-t_8299031.nc Dissipation for LGM ICE-5G ZE ITdrag 1/8th deg<br> diss_dir_ze_1_8_rtp_00kyrBP_-I1.5_pdsal_8299034.nc Dissipation for PD ZE ITdrag 1/8th deg</p> <p>diss_dir_js_1_8_rtop_21kyrBP_i6g_-t_-I6.0_7673000.nc Dissipation for LGM ICE-6G JS ITdrag 1/8th deg<br> diss_dir_js_1_8_rtop_21kyrBP_i5g_-t_-I6.0_7672999.nc Dissipation for LGM ICE-5G JS ITdrag 1/8th deg<br> diss_dir_js_1_8_rtop_00kyrBP_-I6.0_7672998.nc Dissipation for PD JS ITdrag 1/8th deg</p> <p>diss_dir_ze_m2_1_8_rtp_21kyrBP_i5g_blk5_NH_lmsk_-I1.5_8299652.mat M2 dissipation for LGM ICE-5G blk1 + NH ICE-6G land mask ZE ITdrag 1/8th deg<br> diss_dir_ze_m2_1_8_rtp_21kyrBP_i5g_blk5_-I1.5_8299534.mat M2 dissipation for LGM ICE-5G blk5 ZE ITdrag 1/8th deg<br> diss_dir_ze_m2_1_8_rtp_21kyrBP_i5g_blk4_-I1.5_8299533.mat M2 dissipation for LGM ICE-5G blk4 ZE ITdrag 1/8th deg<br> diss_dir_ze_m2_1_8_rtp_21kyrBP_i5g_blk3_-I1.5_8299531.mat M2 dissipation for LGM ICE-5G blk3 ZE ITdrag 1/8th deg<br> diss_dir_ze_m2_1_8_rtp_21kyrBP_i5g_blk2_-I1.5_8299530.mat M2 dissipation for LGM ICE-5G blk2 ZE ITdrag 1/8th deg<br> diss_dir_ze_m2_1_8_rtp_21kyrBP_i5g_blk1_-I1.5_8299529.mat M2 dissipation for LGM ICE-5G blk1 ZE ITdrag 1/8th deg<br> diss_dir_ze_m2_1_8_rtp_21kyrBP_140mSLD_i6g_lmsk_-I1.5_8299543.mat M2 dissipation for PD 140mSLD ICE-6G land mask ZE ITdrag 1/8th deg<br> diss_dir_ze_m2_1_8_rtp_21kyrBP_140mSLD_i5g_lmsk_-I1.5_8299542.mat M2 dissipation for PD 140mSLD ICE-5G land mask ZE ITdrag 1/8th deg<br> diss_dir_ze_m2_1_8_rtp_21kyrBP_130mSLD_i6g_lmsk_-I1.5_8299544.mat M2 dissipation for PD 130mSLD ICE-6G land mask ZE ITdrag 1/8th deg<br> diss_dir_ze_m2_1_8_rtp_21kyrBP_130mSLD_i5g_lmsk_-I1.5_8299541.mat M2 dissipation for PD 130mSLD ICE-5G land mask ZE ITdrag 1/8th deg<br> diss_dir_ze_m2_1_8_rtp_21kyrBP_120mSLD_i6g_lmsk_-I1.5_8299545.mat M2 dissipation for PD 120mSLD ICE-6G land mask ZE ITdrag 1/8th deg<br> diss_dir_ze_m2_1_8_rtp_21kyrBP_120mSLD_i5g_lmsk_-I1.5_8299540.mat M2 dissipation for PD 120mSLD ICE-5G land mask ZE ITdrag 1/8th deg<br> diss_dir_ze_m2_1_8_rtp_21kyrBP_110mSLD_i6g_lmsk_-I1.5_8299546.mat M2 dissipation for PD 110mSLD ICE-6G land mask ZE ITdrag 1/8th deg<br> diss_dir_ze_m2_1_8_rtp_21kyrBP_110mSLD_i5g_lmsk_-I1.5_8299539.mat M2 dissipation for PD 110mSLD ICE-5G land mask ZE ITdrag 1/8th deg<br> diss_dir_ze_m2_1_8_rtp_21kyrBP_100mSLD_i6g_lmsk_-I1.5_8299547.mat M2 dissipation for PD 100mSLD ICE-6G land mask ZE ITdrag 1/8th deg<br> diss_dir_ze_m2_1_8_rtp_21kyrBP_100mSLD_i5g_lmsk_-I1.5_8299538.mat M2 dissipation for PD 100mSLD ICE-5G land mask ZE ITdrag 1/8th deg<br> diss_dir_ze_m2_1_8_rtp_21kyrBP_120mSLD_-I1.5_8299537.mat M2 dissipation for PD 120mSLD JS ITdrag 1/8th deg</p> <p> </p> <p>Climate model output:</p> <p>UVic climate model output for all simulations in the paper has been compressed using tar and zip. Each folder contains the output yearly averages (tavg.xxx.nc) which have been used in the results section of the paper. The model input files are located in /data. The tidal input file is in /data/O_tideenrg_green.nc. Furthermore included are restart files (rest.xxx.nc), model code in /code, and the model exectuables.</p> <p>Climate mode output list:</p> <p>preind_tidal_ze_00kyr_rtop_-1.5_8299034_dir.tgz Output from PIC<br> lgm_tidal_ze_21kyr_i6g_rtop_-1.5_8299008_dir_tau_lgm.tgz Output from LGM_i6gT_lgmW<br> lgm_tidal_ze_21kyr_i6g_rtop_-1.5_8299008_dir.tgz Output from LGM_i6gT_pdW<br> lgm_tidal_ze_21kyr_i5g_rtop_-1.5_8299031_dir_tau_lgm.tgz Output from LGM_i5gT_lgmW<br> lgm_tidal_ze_21kyr_i5g_rtop_-1.5_8299031_dir.tgz Output from LGM_i5gT_pdW<br> lgm_tidal_ze_00kyr_rtop_-1.5_8299034_dir_tau_lgm.tgz Output from LGM_pdT_lgmW<br> lgm_tidal_ze_00kyr_rtop_-1.5_8299034_dir.tgz Output from LGM_pdT_pdW</p> <p>preind_tidal_js_1_2_rtp_00kyrBP_-I1.0_7881173.tgz Output from PIC_1_2_rtp82<br> preind_js_1_2_SandS8.2_00kyrBP_82SNcb_-I1.0_8317333_dir.tgz Output from PIC_1_2_SS82<br> lgm_tidal_js_1_2_SandS8.2_00kyrBP_120mSLD_82SNcb_-t_-I1.0_8317331_dir.tgz Output from LGM_1_2_SS82_sldT<br> lgm_tidal_js_1_2_SandS8.2_00kyrBP_82SNcb_-I1.0_8317333_dir.tgz Output from LGM_1_2_SS82_pdT<br> lgm_tidal_js_1_2_rtop_00kyrBP_120mSLD_82SN_-t_-I1.0_8315693.tgz Output from LGM_1_2_rtp82_sldT<br> lgm_tidal_js_1_2_rtop_00kyrBP_82SN_pdsal_-I1.0_8315702.tgz Output from LGM_1_2_rtp82_pdT<br> <br> </p> <p> </p> <p> </p>
Studying the scale selection of mixed Rossby-gravity waves: Idealized simulations with the TIGAR model
<p>Mixed Rossby-gravity waves peak in two atmospheric regions in reanalysis: the upper troposphere and the upper stratosphere. The scales of MRG waves are different in these two regions, which can be seen e.g. on real-time MRG wave vertical profiles (https://modes.cen.uni-hamburg.de/products#MRG). In order to understand the MRG wave scale selection in these regions, we run idealized simulations with the TIGAR model (Vasylkevych and Zagar, 2021) with a symmetric initial height perturbation with respect to the equator and zonal wind profiles derived from ERA5 reanalysis (Hersbach et al, 2020). In addition, we also run TIGAR simulations with symmetric initial height perturbation and idealized zonal jets centered at various latitudes.</p>
Stellar models for "Realistic Uncertainties for Fundamental Properties of Asteroseismic Red Giants and the Interplay Between Mixing Length, Metallicity and Numax" by Li, Yaguang et al. (2024)
<p>This dataset includes a grid of stellar models from Li, Yaguang et al. (2024), titled "Realistic Uncertainties for Fundamental Properties of Asteroseismic Red Giants and the Interplay Between Mixing Length, Metallicity and Numax".</p> <p>The stellar models are first-ascent red giant branch (RGB) models, sampled using a Sobol sequence within the following six-dimensional initial parameter space: mass (0.7, 2.3) solar mass, Y_init (0.22, 0.37), [M/H] (-0.1.0, 0.60) dex, α_MLT (1.3, 2.7), fov_core (0, 0.02), fov_shell (0, 0.008). The evolutionary tracks are computed up to the point on the RGB where the p-mode large separation (Δν) equals 2 μHz. Approximately 32,768 unique evolutionary tracks are presented, divided into 33 individual chunks.</p> <p>To load the models into a Python Pandas dataframe, use the following command: "import pandas as pd; pd.read_parquet(filepath)". Each model (dataframe row) is provided with global parameters (Teff, radius, luminosity, mass, age, ...) and pure p modes with l=0-2 (frequency, mode inertia, angular degree, ...).</p> <p>For detailed descriptions of the stellar models, please refer to the original paper and the github repository.</p>
Modelling Kepler red giants in eclipsing binaries: calibrating the mixing-length parameter with asteroseismology
<p>MESA inlists associated with <a href="https://ui.adsabs.harvard.edu/#abs/2018MNRAS.475..981L/abstract">Li et al. (2018)</a>. MESA version 8118.</p> <p>Publication DOI: <a href="https://doi.org/10.1093/mnras/stx3079">10.1093/mnras/stx3079</a></p>
Numerical model code, input files and output data for publication "Rapid mixing and exchange of deep-ocean waters in an abyssal boundary current"
<p>Contains numerical model data (code, input files, selected output, matlab diagnostic routines) to supplement publication ``Rapid mixing and exchange of deep-ocean waters in an abyssal boundary current'', by Naveiro Garabato and co-authors. All numerical model data, including any errors, is the responsibility of Sonya Legg. This data set will allow reproduction of simulations, and reproduction of diagnostics shown in plots in the above-referenced paper.</p>
Multivariate mixed model application to mass cytometry data (processed data)
<p>This bachelor thesis demonstrates the results of mass cytometry data re-analysis using multivariate regression. I reanalyse a dataset by Palgen et al. (2019) using two models: a Poisson log-normal mixed model and a logistic linear mixed model from the R package ‘cytoeffect’ (Seiler et al., 2019). By exposing multivariate patterns and the associated uncertainty profiles in the data, the aim of this analysis is to replicate biological conclusions and uncover new biological findings. </p>
Addiitonal Files for The OMG dataset: An Open MetaGenomic corpus for mixed-modality genomic language modeling
<p>Additional Files 1-3 for "The OMG dataset: An Open MetaGenomic corpus for mixed-modality genomic language modeling"</p> <p> </p>
Inlists for the paper "Mixed-mode coupling in the Red Clump: I. Standard single star models"
<p>This repository contains the inlists and run_star_extras used for the paper "Mixed-mode coupling in the Red Clump: I. Standard single star models" by Walter E. van Rossem, Andrea Miglio, and Josefina Montalban for use with MESA-11701. The grid cycles through masses first (0.7, 1.0, 1.5, 2.3, 3.0 msol) and then metallicity ([Fe/H] = -1.0, -0.5, 0.0, 0.25, 0.4).</p> <p>Runs 0000-0004 have initial [Fe/H] = -1.0 and masses 0.7, 1.0, 1.5, 2.3, 3.0 solar masses respectively. The next five runs (0005-0009) have [Fe/H] = -0.5 and the same order of masses, and so on.</p> <p>The previous version had an error in the calculation for the non-parallel approximation and was missing a squareroot in the subroutine <code>calc_dlnc_ds_s0_part_ap</code> when calculating <code>Nred_km1</code> and <code>Nred_k</code>.</p>
Repositiry for the article: "Gene regulatory network inference using mixed-norms regularized multivariate model with covariance selection" by Alain Mbebi & Zoran Nikoloski
<p>This is the repository for the manuscript "Gene regulatory network inference using mixed-norms regularized multivariate model with covariance selection" by Alain J. Mbebi & Zoran Nikoloski.</p> <p><strong>Organisation</strong></p> <ol> <li>The folder Codes contains the following R scripts with the K-folds cross-validation option to learn the hyperparameters:</li> </ol> <ul> <li>Mixed_L1L21_GRN.R which computes L1L21-solution</li> <li>Mixed_L1L21G_GRN.R which computes L1L21G-solution</li> <li>Mixed_L2L21_GRN.R which computes L2L21-solution</li> <li>Mixed_L2L21G_GRN.R which computes L2L21G-solution</li> <li>L1L21_Dream5_Scerevisiae_example_run.R is an example run using the L1L21-solution with S. cerevisiae data (Network 4 in DREAM5 challenge) All files needed to successfully run "L1L21_Dream5_Scerevisiae_example_run" are locaded in the folder Codes.</li> </ul> <p>2. The folder Figures contains all figures in the manuscript.</p> <p>3. The folder Inferred-networks contains all network objects for each dataset and each inference methods in the comparative analysis.</p> <p><strong>Dependencies and required packages</strong></p> <p>The following packages are required for the contending approaches in the comparative analysis: "devtools", "foreach", "plyr", "glmnet" and "randomForest".</p> <p><strong>GENIE3</strong></p> <p>The GENIE3 package can be installed from: <a href="http://bioconductor.org/packages/release/bioc/html/GENIE3.html">http://bioconductor.org/packages/release/bioc/html/GENIE3.html</a></p> <p><strong>TIGRESS</strong></p> <p>The TIGRESS repository can be obtained from: <a href="https://github.com/jpvert/tigress">https://github.com/jpvert/tigress</a></p> <p><strong>ENNET</strong></p> <p>The ENNET repository can be obtained from: <a href="https://github.com/slawekj/ennet">https://github.com/slawekj/ennet</a></p> <p><strong>PLSNET</strong></p> <p>The Matlab source code of PLSNET can be obtained from: <a href="https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-016-1398-6#Sec17">https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-016-1398-6#Sec17</a></p> <p><strong>PORTIA</strong></p> <p>The PORTIA repository can be obtained from: <a href="https://github.com/AntoinePassemiers/PORTIA">https://github.com/AntoinePassemiers/PORTIA</a></p> <p><strong>D3GRN</strong></p> <p>The Matlab source code of D3GRN can be obtained from: <a href="https://github.com/chenxofhit/D3GRN">https://github.com/chenxofhit/D3GRN</a></p> <p><strong>Fused-LASSO</strong></p> <p>The fused-LASSO repository can be obtained from: <a href="https://github.com/omranian/inference-of-GRN-using-Fused-LASSO">https://github.com/omranian/inference-of-GRN-using-Fused-LASSO</a></p> <p><strong>ANOVerence</strong></p> <p>Because of some technical issues (e.g code's accessibility: <a href="http://www2.bio.ifi.lmu.de/%CB%9Ckueffner/anova.tar.gz">http://www2.bio.ifi.lmu.de/˜kueffner/anova.tar.gz</a>), we were not able to reproduce ANOVerence results and used the inferred network from DREAM5 challenge instead.</p> <p>4. Although the codes here were tested on Fedora 29 (Workstation Edition) using R (version 4.2.2), they can run under any Linux or Windows OS distributions, as long as all the required packages are compatible with the desired R version.</p>
A 1D Model for Nucleation of Ice from Aerosol Particles: An Application to a Mixed-Phase Arctic Stratus Cloud Layer
<p>A 1D Model for Nucleation of Ice from Aerosol Particles:</p> <p>An Application to a Mixed-Phase Arctic Stratus Cloud Layer</p> <p>Daniel A. Knopf<sup>1</sup>*, Israel Silber<sup>2</sup>, Nicole Riemer<sup>3</sup>, Ann M. Fridlind<sup>4</sup>, Andrew S. Ackerman<sup>4</sup></p> <p><sup>1</sup>School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, USA</p> <p><sup>2</sup>Department of Meteorology and Atmospheric Science, Pennsylvania State University, University Park, PA, USA</p> <p><sup>3</sup>Department of Atmospheric Sciences, University of Illinois at Urbana–Champaign, Urbana, IL, USA</p> <p><sup>4</sup>NASA Goddard Institute for Space Studies, New York, NY, USA</p> <p> </p> <p>Corresponding author: Daniel Knopf (daniel.knopf@stonybrook.edu)</p> <p> </p> <p><strong>This repository contains all model output data in netCDF format to reproduce simulation results and corresponding figures given in above listed publication.</strong></p> <p>File name description:</p> <p>Type of parameterization: <em>INN, INAS, ABIFM</em></p> <p>INP treatment, diagnostic or prognostic: <em>diag, prog</em></p> <p>Aerosol size distribution:</p> <p><em>05mu</em>: monodisperse 0.5 μm diameter</p> <p><em>15mu</em>: monodisperse 0.5 μm diameter</p> <p><em>polydisperse</em>: polydisperse particle size distribution</p> <p>Model initialization and thermodynamic data: <em>model_data</em></p> <p>Aerosol/INP data: <em>aerosol_data</em>, <em>polydisperse_data</em></p> <p>Change in ice nucleation efficiency: <em>10X, 100X</em></p>
Data from: Refining trophic dynamics through multi-factor Bayesian mixing models: A case study of subterranean beetles
Open the record for dataset details and reuse information.
Two-step mixed model approach to analyzing differential alternative RNA splicing: Datasets and R scripts for analysis of alternative splicing
Open the record for dataset details and reuse information.
Developing crown width model for mixed forests using soil, climate, and stand factors
Open the record for dataset details and reuse information.
Gradients in richness and turnover of a forest passerine’s diet prior to breeding: a mixed model approach applied to faecal metabarcoding data
Open the record for dataset details and reuse information.
Model data to investigate wood frog abundance in 17-year post harvest variable retention mixed wood forests
Open the record for dataset details and reuse information.
Comparing mixed models and Random Forest association tests using naturalGWAS and a Striped Bass SNP dataset
Open the record for dataset details and reuse information.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.