Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,751
datasets available to search
ShareScore release 0.7.1
Dataset results
1,751 results for “molecular phylogenetics”
Fig. 5 in A new blood parasite of leaf warblers: molecular characterization, phylogenetic relationships, description and identification of vectors
Fig. 5 Sporogonic stages of Haemoproteus homopalloris n. sp. in tce biting midge Culicoides nubeculosus. Zygote (a) and sporozoite (b). Arrowcead: pigment granuges; arrow: sporozoite nucgeus. Metcanog-fixed and Giemsa-stained tcin figms. Scale-bar: a, b, 10 μm
Fig. 2 in A new blood parasite of leaf warblers: molecular characterization, phylogenetic relationships, description and identification of vectors
Fig. 2 Bayesian pcygogenetic inference of cytb gene gineages (479 bp) of 35 Haemoproteus spp. Tce tree is rooted witc Leucocytozoon sp. (gineage gSISKIN2). Cgades A and B indicate species of tce subgenus Parahaemoproteus (a) and caemoproteids witc page-staining cytopgasm of gametocytes (b). MagAvi gineage codes are provided, foggowed by parasite species names and GenBank accession numbers. Nodag support vagues indicate Bayesian posterior probabigities. New species is given in bogd
Fig. 1 in A new blood parasite of leaf warblers: molecular characterization, phylogenetic relationships, description and identification of vectors
Fig. 1 Gametocytes of two species of caemoproteids described from geaf warbges, Pcyggoscopidae. Haemoproteus homopalloris n. sp. (a-l) and Haemoproteus palloris (m-p). Young gametocytes (a, b), macrogametocytes (c-g, m, n) and microgametocytes (h-l, o, p). Long arrows: gametocyte nucgei; scort arrows: vacuoge-gike spaces in macrogametocytes; arrowceads: pigment granuges. Giemsa-stained tcin bgood figms. Scale-bar: a-p, 10 μm
Fig. 4 in A new blood parasite of leaf warblers: molecular characterization, phylogenetic relationships, description and identification of vectors
Fig. 4 Gametocytes of two species of caemoproteids, wcicc cave been reported in tce wood warbger Phylloscopus sibilatrix. Macrogametocytes (a-c, e-g) and microgametocytes (d, h) of Haemoproteus majoris (a-d) and H. belopolskyi (e-h). Note tcat tce intensity of staining of tce cytopgasm is different in macro- and microgametocytes. Long arrows: gametocyte nucgei; scort arrows: vacuoge-gike spaces in macrogametocytes; arrowceads: pigment granuges. Giemsa-stained tcin bgood figms. Scale-bar: a-h, 10 μm
Fig. 3 in A new blood parasite of leaf warblers: molecular characterization, phylogenetic relationships, description and identification of vectors
Fig. 3 Haemoproteus spp. witc page staining of macrogametocyte cytopgasm. Haemoproteus concavocentralis (a-d), H. minutus (e-h), H. pallidus (i- l), H. pallidulus (m-p) and H. vacuolatus (q-t). Macrogametocytes (a, b, e, f, i, j, m, n, q, r), microgametocytes (c, d, g, h, k, l, o, p, s, t). Note tce foggowing vaguabge diagnostic features of tce parasites: presence of a space between tce nucgeus of tce infected erytcrocyte and tce growing gametocyte in H. concavocentralis (a); cgeargy irregugar outgine of mature gametocytes, wcicc do not toucc tce poges of infected erytcrocytes in H. minutus (e-h); gametocyte wcicc are cgosegy appressed to tce nucgeus of erytcrocyte but do not toucc tce envegope of erytcrocyte agong tceir entire margin in H. pallidus (j, l); smagg pigment granuges in mature gametocytes of H. pallidulus (m-p); presence of one prominent vacuoge in tce cytopgasm of eacc advanced macrogametocyte in H. vacuolatus (q-t). Agg tcese features are not ccaracteristics of H. homopalloris n. sp. (see Fig. 1). Long simpge arrows: gametocyte nucgei; scort simpge arrows: vacuoge-gike spaces in macrogametocytes; arrowceads: pigment granuges; gong simpge wide arrows: space present between tce parasite and an infected erytcrocyte nucgeus (a, d) and space between tce parasite and tce envegope of infected erytcrocyte (j, l). Giemsa-stained tcin bgood figms. Scale-bar: a-t, 10 μm
Fig. 5 in Molecular Phylogenetic and Morphological Problems of the Aki Salamander Hynobius akiensis: Description of Two New Species from Chugoku, Japan
Fig. 5. Larvae, egg sacs, and habitat at the type locality of Hynobius geiyoensis sp. nov. (A, C, and E, respectively) and H. sumidai sp. nov. (B, D, and F, respectively).
Fig. 1 in Molecular Phylogenetic and Morphological Problems of the Aki Salamander Hynobius akiensis: Description of Two New Species from Chugoku, Japan
Fig. 1. Sampling map of the three Hynobius species used in this study. The enlarged area includes the central to the western part of Hiroshima Prefecture and the northernmost part of Ehime Prefecture. Closed symbols correspond to each of the three species sequenced in the current study. Open symbols correspond to each of the three species sequenced by other studies. The underlined localities show the sampling points of individuals for morphological comparisons: Pops. 1 (18 males) and 2 (1 male) for H. geiyoensis sp. nov.; Pop. 8 (7 males) for H. sumidai sp. nov.; Pops. 14 (3 males), 15 (7 males), 20 (6 males), 29 (3 males), 30 (1 male), 34 (6 males), 39 (1 male), 54 (1 male) for H. akiensis.
Fig. 4 in Molecular Phylogenetic and Morphological Problems of the Aki Salamander Hynobius akiensis: Description of Two New Species from Chugoku, Japan
Fig. 4. Holotype of Hynobius geiyoensis sp. nov. (HMNH-AM-101, adult male, 58.4 mm SVL) from the (A) dorsal and (B) ventral perspective; holotype of H. sumidai sp. nov. (HMNH-AM-102, adult male, 48.2 mm SVL) from the (C) dorsal and (D) ventral perspective; and a specimen from the type locality (topotype) of H. akiensis (KPM-NFA 946, adult male, 55.3 mm) from the (E) dorsal and (F) ventral perspective.
Fig. 3 in Molecular Phylogenetic and Morphological Problems of the Aki Salamander Hynobius akiensis: Description of Two New Species from Chugoku, Japan
Fig. 3. Two-dimensional plots of canonical discriminant analysis in males. The x and y axes show discriminant score 1 (DS1) and discriminant score 2 (DS2), respectively. The contribution ratios of DS1 and DS2 were 88.03 % and 11.97 %, respectively.
Fig. 2 in Molecular Phylogenetic and Morphological Problems of the Aki Salamander Hynobius akiensis: Description of Two New Species from Chugoku, Japan
Fig. 2. Phylogenetic tree produced by Bayesian inference using 630-bp cytochrome b genes. Salamandrella keyserlingii was used as an outgroup. Scale bar shows genetic distance (expected changes per site). Numbers located near the nodes are posterior probabilities (PP) for Bayesian inference and bootstrap (BS) values for maximum likelihood estimation. Values appearing in parentheses after the haplotype names correspond to population localities as indicated in Table 1 and Fig. 1. Asterisks after the parentheses (Pops. 1, 8, and 54) indicate the type locality of the three species. The labels covered by shaded boxes indicate the transition type of Hynobius akiensis.
Figure 4 in Deladenus bonabensis n. sp. (Tylenchomorpha: Neotylenchidae) from East Azarbaijan province, northwestern Iran: A morphological and molecular phylogenetic study
Figure 4: Bayesian 50% majority rule consensus tree of Deladenus bonabensis n. sp. based on large subunit (LSU) rDNA D2-D3 sequences under GTR + I + G model. Bayesian posterior probability values more than 0.50 are given for appropriate clades. The new sequence is indicated in bold.
Figure 3 in Deladenus bonabensis n. sp. (Tylenchomorpha: Neotylenchidae) from East Azarbaijan province, northwestern Iran: A morphological and molecular phylogenetic study
Figure 3: Bayesian 50% majority rule consensus tree of Deladenus bonabensis n. sp. based on small subunit (SSU) rDNA sequences under GTR + I + G model. Bayesian posterior probability values more than 0.50 are given for appropriate clades. The new sequence is indicated in bold.
Figure 2 in Deladenus bonabensis n. sp. (Tylenchomorpha: Neotylenchidae) from East Azarbaijan province, northwestern Iran: A morphological and molecular phylogenetic study
Figure 2: Light micrographs of Deladenus bonabensis n. sp. A: Anterior body region, female; B: Anterior body region, male; C: Part of pharynx, female, showing the position of secretoryexcretory pore and hemizonid (upper arrow showng hemizonid, lower arrow showing the secretory-excretory pore); D: Lateral lines, female; E & F: Posterior body region, female; G: Posterior body region, male; H: Spicules and gubernaculum, male; H1: Penial tube, male. All scale bars = 10 µm.
Figure 1 in Deladenus bonabensis n. sp. (Tylenchomorpha: Neotylenchidae) from East Azarbaijan province, northwestern Iran: A morphological and molecular phylogenetic study
Figure 1: Line drawings of Deladenus bonabensis n. sp. A: Mycetophagous female; B: Mycetophagous male; C: Anterior body region, female; D: Posterior body region, female; D1: Tail tip, female; E: Posterior body region, male; F: Parts of reproductive system, female; G: Lateral lines, female.
Figure 1 in Molecular phylogenetics of the Neanthes acuminata (Annelida: Nereididae) species complex
Figure 1. Maximum-likelihood tree resulting from partitioned analysis of the full concatenated data set in Garli 2.0. Numbers above branches represent ML bootstrap support values; numbers below branches represent posterior probabilities from an unpartitioned Bayesian analysis in MrBayes 3.2.1. Within each dashed box names refer to all populations present within that clade.
Figure 2 in Molecular phylogenetics of the Neanthes acuminata (Annelida: Nereididae) species complex
Figure 2. Maximum-likelihood tree resulting from partitioned analysis of the "all three genes" data set in Garli 2.0. Numbers above branches represent ML bootstrap support values; numbers below branches represent posterior probabilities from an unpartitioned Bayesian analysis in MrBayes 3.2.1
Fig. 34. Phylogenetic network inferred from 1,476 in Morphology, Ciliary Pattern and Molecular Phylogeny of Trachelophyllum brachypharynx Levander, 1894 (Litostomatea, Haptoria, Spathidiida)
Fig. 34. Phylogenetic network inferred from 1,476 nucleotide characters of 69 litostomatean taxa, using the NeighborNet algorithm and the uncorrected distances. Numbers along the edges indicate bootstrap support values coming from 1,000 replicates. Only bootstraps> 50% and relevant to this study are shown. The scale bar indicates three substitutions per one thousand nucleotide positions.
Figure 5. A phylogenetic tree was generated using the neighbor-joining method which shows the genetic relationship between C. sphaerospermum 2 in Morphological and molecular identification of Cladosporium sphaerospermum isolates collected from tomato plant residues
Figure 5. A phylogenetic tree was generated using the neighbor-joining method which shows the genetic relationship between C. sphaerospermum 2 (as indicated in red circle) and the other C. sphaerospermum isolates deposited in GenBank (NCBI)
Fig. 3 in Molecular Determination of the Phylogenetic Position of a Species in the Genus Colpodella (Alveolata)
Fig. 3. Illustration of the morphology of Colpodella, Perkinsus, and Parvilucifera which is indicated to be the plesiomorphic condition for the Alveolata. Thickened branches indicate implied retention of the Colpodella/Perkinsus morphology.
Fig. 1 in Molecular Determination of the Phylogenetic Position of a Species in the Genus Colpodella (Alveolata)
Fig. 1. Consenses of optimal trees found from parsimony analysis of SSU rDNA aligned with MALIGN using all aligned sites (A), only conservative sites (B), and excluding outgroup taxa for all sites (C) and conservative sites only (D). Branches are drawn proportional to amount of change. Values at internodes for groups of interest are parsimony jackknife support indices (asterisk indicates not supported with this method). Thickened branches indicate implied retention of the Colpodella/Perkinsus morphology.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.