Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
173
datasets available to search
ShareScore release 0.9.0
Dataset results
173 results for “molecular recognition”
FIGURE 5 in A review of species recognition in the Phenacoccus aceris species-group (Hemiptera: Coccomorpha: Pseudococcidae) using molecular and morphological data
FIGURE 5. The width of the circulus on segment I (A) and the ratio of the width of the circulus on segment III to that of on segment I (B). Figures in parentheses indicate the number of vouchers used for the measurements.
FIGURE 4 in A review of species recognition in the Phenacoccus aceris species-group (Hemiptera: Coccomorpha: Pseudococcidae) using molecular and morphological data
FIGURE 4. Illustration and count of the number circuli for each of the five PTP MOTUs. Roman numerals indicate the abdominal segments. Circuli with a tendency to be absent are in red.
FIGURE 1 in A review of species recognition in the Phenacoccus aceris species-group (Hemiptera: Coccomorpha: Pseudococcidae) using molecular and morphological data
FIGURE 1. Collection sites and habitus photographs of the Phenacoccus aceris species-group. The four genetic clades are colored as: PACE1-red, PACE2-green, PACE3-yellow, PACE4-blue. Collection sites: 1. LNSY=Liaoning, Shenyang; 2. BJ=Beijing; 3. HBTS=Hebei, Tangshan; 4. HBSX=Hebei, Shexian; 5. HNPY=Henan, Puyang; 6. HNZZ=Henan, Zhengzhou; 7. SXYX=Shanxi, Yuxian; 8. SXHG=Shanxi, Huguan; 9. SXYC=Shanxi, Yuci; 10. SXTG=Shanxi, Taigu; 11. SXTY=Shanxi, Taiyuan; 12. IMBT=Inner Mongolia, Baotou; 13. GSLZ=Gansu, Lanzhou; 14. GSLX=Gansu, Linxia; 15. GSZY=Gansu, Zhangye; 16. QHXN=Qinghai, Xining.
FIGURE 3 in A review of species recognition in the Phenacoccus aceris species-group (Hemiptera: Coccomorpha: Pseudococcidae) using molecular and morphological data
FIGURE 3. Bayesian trees inferred from analysis of each of the genes separately. The name of each terminal is the code for the specimen used that was representative of that geographical population. Values next to each node indicate posterior probabilities / bootstrap proportions. Black bars indicate the monophyletic clades from PACE1 to PACE4. Colors are as in Fig. 1.
FIGURE 2 in A review of species recognition in the Phenacoccus aceris species-group (Hemiptera: Coccomorpha: Pseudococcidae) using molecular and morphological data
FIGURE 2. Bayesian tree inferred from the combined dataset (10 million generations; burn-in = 2.5 million generations). Values next to each node indicate posterior probabilities (±0.7)/ bootstrap proportions (±50). The name of each terminal is the code for the specimen used that was representative of that haplotype. Black bars indicate the monophyletic clades from PACE1 to PACE4. Numbers below PACE indicate the support value of putative species delimitated by the PTP model. In the rectangular box are the host families each clade feed with the number of host species in the parenthesis. Colors are as in Fig. 1.
Molecular simulations to investigate the impact of N6-methylation in RNA recognition: Improving accuracy and precision of binding free energy prediction
<p>Dataset relative to Molecular dynamics simulation performed for the work "Molecular simulations to investigate the impact of N6-methylation in RNA recognition: Improving accuracy and precision of binding free energy prediction".<br><br>The dataset contains data of 42 alchemical simulations and is subdivided in 4 zip files.<br><br>Folders are named following the scheme: system_configuration_forcefield.<br>Zip file C1 contains .mdp files used for all the simulations.<br><br>Folders corresponding to simulations performed with the fit5_AC ff contains:<br>- topology files (topol.top, topol_RNA_chain_A.itp, topol_RNA_chain_B.itp)<br>- index files needed to reconstruct the demuxed trajectories (replica_index.xvg , replica_index.xvg)<br>- 16 folders, one for each replica (lam0 ... lam15), containing:<br> - final configuration (confout.gro)<br> - log file (md.log)</p> <p> - input file for md run (md.tpr)<br> - energies for the concatenated trajectories recomputed for the realtive replica hamiltonian (ener_trj_conc.edr)<br><br>Folders corresponding to simlations performed with fit_A parametrization only contains .edr files corresponding to energies for the concatenated trajectory computed for 14 set of DeQs drawn from a gaussian distribution, with the relative topologies.<br><br>Supplementary materials relative to simlations performed with fit_A parametrizationcan be found in: https://zenodo.org/records/6498021</p>
Supplementary material 1 from: Sakuragui CM, Calazans LSB, de Oliveira LL, de Morais EB, Benko-Iseppon AM, Vasconcelos S, Schrago CEG, Joseph Mayo SJ (2018) Recognition of the genus Thaumatophyllum Schott − formerly Philodendron subg. Meconostigma (Araceae) − based on molecular and morphological evidence. PhytoKeys 98: 51-71. https://doi.org/10.3897/phytokeys.98.25044
Taxon sampling, voucher information and GenBank : Explanation note: Taxon sampling, voucher information and GenBank accession numbers of Philodendron, Homalomena and outgroup species.
Molecular basis for the increased affinity of an RNA recognition motif with re-engineered specificity: A molecular dynamics and enhanced sampling simulations study- Part 3
<p>Trajectories and input files for the simulations of the Rbfox·pre-miR20b complex.</p>
Molecular basis for the increased affinity of an RNA recognition motif protein engineered to re-direct its specificity -PART 5
<p>Trajectories and input files for the simulations (REST2, REST2-PS and unbiased MD) of the Rbfox*·pre-miR20b* complex.</p>
Molecular basis for the increased affinity of an RNA recognition motif with re-engineered specificity: A molecular dynamics and enhanced sampling simulations study- PART 2
<p>Trajectories and input files of the simulations of the free pre-miR20b.</p>
Molecular basis for the increased affinity of an RNA recognition motif with re-engineered specificity: A molecular dynamics and enhanced sampling simulations study-PART 7
<p>Simulations of the Rbfox*-miR20b and of the Rbfox-mir20b* complexes.</p>
Fig. 7 in Enlarging the monotypic Monocarpieae (Annonaceae, Malmeoideae): recognition of a second genus from Vietnam informed by morphology and molecular phylogenetics
Fig. 7. – Distribution of Leoheo domatiophorus Chaowasku, D.T. Ngo & H.T. Le (stars).
Fig. 57 in Molecular and morphological recognition of species boundaries in the neglected ant genus Brachymyrmex (Hymenoptera: Formicidae): toward a taxonomic revision
Fig. 57 Maximum clade credibility tree of Brachymyrmex and Myrmelachista based on five gene fragments (see Supplementary material Table S1). Analyses were run under maximum parsimony (MP), maximum likelihood (ML), and Bayesian inference (BI) with bootstrap support values and Bayesian posterior probabilities indicated above
Fig. 56 in Molecular and morphological recognition of species boundaries in the neglected ant genus Brachymyrmex (Hymenoptera: Formicidae): toward a taxonomic revision
Fig. 56 Boxplots representing intraspecific variation and interspecific differences for eight morphometric traits. Interspecific differences are tested with Benjamini-Hochberg corrected pairwise Dunn's tests, with sig- nificance levels indicated by letter codes (if species carry at least one identical letter than observed dif- ferences are insignificant, if they carry no identical letter, the ob- served differences for the studied trait are significant)
Fig. 55 in Molecular and morphological recognition of species boundaries in the neglected ant genus Brachymyrmex (Hymenoptera: Formicidae): toward a taxonomic revision
Fig. 55 Boxplots representing intraspecific variation and interspecific differences for eight morphometric traits. Interspecific differences are tested with Benjamini-Hochberg corrected pairwise Dunn's tests, with sig- nificance levels indicated by letter codes (if species carry at least one identical letter than observed dif- ferences are insignificant, if they carry no identical letter, the ob- served differences for the studied trait are significant)
Fig. 54 in Molecular and morphological recognition of species boundaries in the neglected ant genus Brachymyrmex (Hymenoptera: Formicidae): toward a taxonomic revision
Fig. 54 Morphospace occupation of 38 of the here studied Brachymyrmex species as reconstructed with non-metric multidimensional scaling. The limited stress (5.70) indicates that the ordination is robust
Fig. 46 in Molecular and morphological recognition of species boundaries in the neglected ant genus Brachymyrmex (Hymenoptera: Formicidae): toward a taxonomic revision
Fig. 46 Brachymyrmex patagonicus: a, c, e head, dorsal, and lateral view of the lectotype worker; b, d, f B. laevis n. syn.: head, dorsal, and lateral view of a syntype worker
Fig. 38 in Molecular and morphological recognition of species boundaries in the neglected ant genus Brachymyrmex (Hymenoptera: Formicidae): toward a taxonomic revision
Fig. 38 Brachymyrmex micromegas: a, c, e head, dorsal, and lateral view of the lectotype worker; b, d, f head, dorsal, and lateral view of a soldier
Fig. 34 in Molecular and morphological recognition of species boundaries in the neglected ant genus Brachymyrmex (Hymenoptera: Formicidae): toward a taxonomic revision
Fig. 34 Brachymyrmex giardi: a, c, e head, dorsal, and lateral view of the lectotype worker; b, d, f head, dorsal, and lateral view of a putative worker-queen intercaste
Fig. 31 in Molecular and morphological recognition of species boundaries in the neglected ant genus Brachymyrmex (Hymenoptera: Formicidae): toward a taxonomic revision
Fig. 31 Brachymyrmex fiebrigi: a–c B. fiebrigi var. funicularis n. syn.: head, dorsal, and lateral view of a syntype worker
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.