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386
datasets available to search
ShareScore release 0.9.0
Dataset results
386 results for “transposons”
Transposon defense by endo-siRNAs, piRNAs and somatic pilRNAs: Roles of Loqs-PD and R2D2
GEO Series GSE45290. Drosophila melanogaster. 16 samples. Type: Non-coding RNA profiling by high throughput sequencing.
rahu is a mutant allele of Dnmt3c, encoding a DNA methyltransferase homolog required for meiosis and transposon repression in the mouse male germline
GEO Series GSE100960. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Distinct and collaborative functions of Yb and Armitage in transposon-targeting piRNA biogenesis
GEO Series GSE128924. Drosophila melanogaster. 19 samples. Type: Other.
Mutating DDM1 in Physcomitrella patens disrupts DNA methylation with a minute effect on transposon regulation and development
GEO Series GSE198693. Physcomitrium patens. 8 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
The de novo DNA methyltransferase DNMT3C protects male fertility from transposon activity (RNA-Seq).
GEO Series GSE84139. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Super-sized clustered loops anchored at transposon Helitrons in Xenopus tropicalis sperm associate with late gene expression during embryogenesis [RNA-Seq]
GEO Series GSE197874. Xenopus tropicalis x Xenopus laevis. 26 samples. Type: Expression profiling by high throughput sequencing.
Super-sized clustered loops anchored at transposon Helitrons in Xenopus tropicalis sperm associate with late gene expression during embryogenesis
GEO Series GSE197877. Xenopus tropicalis; Xenopus tropicalis x Xenopus laevis; Xenopus laevis. 67 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Promoter activity profiling throughout the Drosophila life cycle reveals role of transposons in regulatory innovation
GEO Series GSE36212. Drosophila melanogaster. 36 samples. Type: Expression profiling by high throughput sequencing.
Nuclear Ccr4-Not mediates the degradation of telomeric and transposon transcripts at chromatin in the Drosophila germline
GEO Series GSE120412. Drosophila melanogaster. 10 samples. Type: Non-coding RNA profiling by high throughput sequencing; Other.
A non-Dicer RNase III and four other novel factors required for RNAi-mediated transposon suppression in the human pathogenic yeast C. neoformans
GEO Series GSE128009. Cryptococcus neoformans. 48 samples. Type: Expression profiling by high throughput sequencing; Other; Non-coding RNA profiling by high throughput sequencing.
Expression of genes and transposons in mop1 mutants and non-mutants
GEO Series GSE16789. Zea mays. 2 samples. Type: Expression profiling by high throughput sequencing.
Epigenetic and transcriptional consequences in the endosperm of chemically induced transposon mobilization in Arabidopsis
GEO Series GSE260819. Arabidopsis thaliana. 8 samples. Type: Methylation profiling by high throughput sequencing.
Maternally inherited piRNAs direct transient heterochromatin formation at active transposons during early Drosophila embryogenesis
GEO Series GSE160778. Drosophila melanogaster. 62 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing; Other.
RNA clamping by Vasa assembles a piRNA Amplifier complex on transposon transcripts
GEO Series GSE57420. Bombyx mori. 13 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Traffic Jam activates the Flamenco piRNA cluster locus and the Piwi pathway to ensure transposon silencing and Drosophila fertility
GEO Series GSE286025. Drosophila melanogaster. 65 samples. Type: Non-coding RNA profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
DNA methylation-sensitive transcription factors and bivalency orchestrate transposon expression in the absence of DNA methylation [Retrotransposon expression in conditional NRF1 mutant testes]
GEO Series GSE282279. Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing.
The mosquito Aedes aegypti has a large genome size and high transposable element load but contains a low proportion of transposon-specific piRNAs
GEO Series GSE33595. Aedes aegypti; Drosophila melanogaster. 8 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Inducible three-factor direct reprogramming to nephron progenitors using piggyBac transposons
GEO Series GSE107410. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression
GEO Series GSE111814. Arabidopsis thaliana. 83 samples. Type: Methylation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Large numbers of putative miRNAs originate from DNA transposons and are coincident with a large species radiation in bats.
GEO Series GSE47593. Eptesicus fuscus; Canis lupus familiaris; Equus caballus. 4 samples. Type: Non-coding RNA profiling by high throughput sequencing.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.