Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
727
datasets available to search
ShareScore release 0.9.0
Dataset results
727 results for “Molecular taxonomy”
Data from: Molecular phylogeny of the horse flies: a framework for renewing tabanid taxonomy
Open the record for dataset details and reuse information.
Figure 5 from: Sabbatini Peverieri G, Mitroiu M-D, Bon M-C, Balusu R, Benvenuto L, Bernardinelli I, Fadamiro H, Falagiarda M, Fusu L, Grove E, Haye T, Hoelmer K, Lemke E, Malossini G, Marianelli L, Moore MR, Pozzebon A, Roversi P-F, Scaccini D, Shrewsbury P, Tillman G, Tirello P, Waterworth R, Talamas EJ (2019) Surveys of stink bug egg parasitism in Asia, Europe and North America, morphological taxonomy, and molecular analysis reveal the Holarctic distribution of Acroclisoides sinicus (Huang & Liao) (Hymenoptera, Pteromalidae). Journal of Hymenoptera Research 74: 123-151. https://doi.org/10.3897/jhr.74.46701
Figure 5 Boxplot of pair-wise molecular distances between (left) the Acroclisoides haplotypes evidenced in this study, (center) conspecific individuals in the Pteromalinae, (right) individuals from different species of the same genus in the Pteromalinae.
Figure 4 from: Sabbatini Peverieri G, Mitroiu M-D, Bon M-C, Balusu R, Benvenuto L, Bernardinelli I, Fadamiro H, Falagiarda M, Fusu L, Grove E, Haye T, Hoelmer K, Lemke E, Malossini G, Marianelli L, Moore MR, Pozzebon A, Roversi P-F, Scaccini D, Shrewsbury P, Tillman G, Tirello P, Waterworth R, Talamas EJ (2019) Surveys of stink bug egg parasitism in Asia, Europe and North America, morphological taxonomy, and molecular analysis reveal the Holarctic distribution of Acroclisoides sinicus (Huang & Liao) (Hymenoptera, Pteromalidae). Journal of Hymenoptera Research 74: 123-151. https://doi.org/10.3897/jhr.74.46701
Figure 4 Haplotype network of the 49 Acroclisoides sinicus barcodes analyzed in this study. Each circle corresponds to one haplotype; circle size gives the proportion of individuals belonging to the haplotype. The color of the circles represents the geographical origin. Numbers correspond to the haplotype numbers. Hash marks symbolize the number of mutations between haplotypes.
Figure 1 from: Sabbatini Peverieri G, Mitroiu M-D, Bon M-C, Balusu R, Benvenuto L, Bernardinelli I, Fadamiro H, Falagiarda M, Fusu L, Grove E, Haye T, Hoelmer K, Lemke E, Malossini G, Marianelli L, Moore MR, Pozzebon A, Roversi P-F, Scaccini D, Shrewsbury P, Tillman G, Tirello P, Waterworth R, Talamas EJ (2019) Surveys of stink bug egg parasitism in Asia, Europe and North America, morphological taxonomy, and molecular analysis reveal the Holarctic distribution of Acroclisoides sinicus (Huang & Liao) (Hymenoptera, Pteromalidae). Journal of Hymenoptera Research 74: 123-151. https://doi.org/10.3897/jhr.74.46701
Figure 1 Typical shapes of exit holes produced by egg parasitoids of Halyomorpha halys in Europe: Anastatus bifasciatus male (A) and female (B) (NE-Italy); Acroclisoides sinicus (C, D) (NE-Italy); Trissolcus mitsukurii (E) (NE-Italy) and Trissolcus japonicus (F) (Switzerland).
Figure 3 from: Sabbatini Peverieri G, Mitroiu M-D, Bon M-C, Balusu R, Benvenuto L, Bernardinelli I, Fadamiro H, Falagiarda M, Fusu L, Grove E, Haye T, Hoelmer K, Lemke E, Malossini G, Marianelli L, Moore MR, Pozzebon A, Roversi P-F, Scaccini D, Shrewsbury P, Tillman G, Tirello P, Waterworth R, Talamas EJ (2019) Surveys of stink bug egg parasitism in Asia, Europe and North America, morphological taxonomy, and molecular analysis reveal the Holarctic distribution of Acroclisoides sinicus (Huang & Liao) (Hymenoptera, Pteromalidae). Journal of Hymenoptera Research 74: 123-151. https://doi.org/10.3897/jhr.74.46701
Figure 3 Acroclisoides sinicus: paratype of A. solus ♀ (U.S.A.), habitus in lateral view (A); idem, head in frontal view (B); ♂ (Switzerland), habitus in lateral view (C); idem, head in frontal view (D).
Figure 2 from: Sabbatini Peverieri G, Mitroiu M-D, Bon M-C, Balusu R, Benvenuto L, Bernardinelli I, Fadamiro H, Falagiarda M, Fusu L, Grove E, Haye T, Hoelmer K, Lemke E, Malossini G, Marianelli L, Moore MR, Pozzebon A, Roversi P-F, Scaccini D, Shrewsbury P, Tillman G, Tirello P, Waterworth R, Talamas EJ (2019) Surveys of stink bug egg parasitism in Asia, Europe and North America, morphological taxonomy, and molecular analysis reveal the Holarctic distribution of Acroclisoides sinicus (Huang & Liao) (Hymenoptera, Pteromalidae). Journal of Hymenoptera Research 74: 123-151. https://doi.org/10.3897/jhr.74.46701
Figure 2 Acroclisoides sinicus, ♀ (Italy, Cordenons): habitus in dorso-lateral view (A); head in frontal view (B); head in dorsal view (C); fore wing (D); antennae (E); mesosoma in dorsal view (F); mesosoma in lateral view (G).
Supplementary material 2 from: Nazari V, ten Hagen W (2020) Molecular taxonomy of Tomares hairstreaks (Lepidoptera, Lycaenidae, Theclinae). Deutsche Entomologische Zeitschrift 67(1): 19-33. https://doi.org/10.3897/dez.67.50252
SI 2. Male and female genitalia dissections of Tomares species.
Figure 2 from: Nazari V, ten Hagen W (2020) Molecular taxonomy of Tomares hairstreaks (Lepidoptera, Lycaenidae, Theclinae). Deutsche Entomologische Zeitschrift 67(1): 19-33. https://doi.org/10.3897/dez.67.50252
Figure 2 Neighbour-Joining tree of 271 barcode sequences of Tomares. Values are bootstrap of 100 replicates for supported nodes.
Figure 1 from: Nazari V, ten Hagen W (2020) Molecular taxonomy of Tomares hairstreaks (Lepidoptera, Lycaenidae, Theclinae). Deutsche Entomologische Zeitschrift 67(1): 19-33. https://doi.org/10.3897/dez.67.50252
Figure 1 Right valvae in male genitalia of Tomares species. 1.T. mauritanicus GP76 (Morocco); 2.T. ballus GP77 (Morocco); 3.T. fedtschenkoi GP78 (Tajikstan); 4.T. desinens GP86 (Qazvin, Iran); 5.T. callimachus callimachus GP75 (Crimea); 6.T. callimachus hafis GP86 (Zanjan, Iran); 7.T. nesimachus GP84 (Damascus, Syria); 8.T. "telemachus" GP79 (Turkmenistan); 9.T. romanovi GP74 (Lorestan, Iran); 10.T. nogelii nogelii GP88 (Nevshehir, Turkey); 11.T. nogelii nogelii GP85 (Sivas, Turkey); 12.T. nogelii dobrogensis GP83 (Ukraine). All dissections and images by WtH.
Figure 4 from: Nazari V, ten Hagen W (2020) Molecular taxonomy of Tomares hairstreaks (Lepidoptera, Lycaenidae, Theclinae). Deutsche Entomologische Zeitschrift 67(1): 19-33. https://doi.org/10.3897/dez.67.50252
Figure 4 Distribution of taxa in the nogelii complex. Shapes represent morphological identifications (□ = nogelii, ∆ = nesimachus, ○ = romanovi), colors represent COI barcode haplotypes (red = nogelii haplotypes, orange = nesimachus haplotypes, green = romanovi haplotypes). Sites with shared or more than one haplotypes are circled. Records in gray are concatenated from literature. Approximate taxon boundaries are inferred from represented haplotypes. For haplotype network, see Figure 3.
Figure 3 from: Nazari V, ten Hagen W (2020) Molecular taxonomy of Tomares hairstreaks (Lepidoptera, Lycaenidae, Theclinae). Deutsche Entomologische Zeitschrift 67(1): 19-33. https://doi.org/10.3897/dez.67.50252
Figure 3 TCS Haplotype Network of the nogelii complex. Colors indicate morphological identifications (red = nogelii, blue = dobrogensis, orange = nesimachus, green = romanovi, yellow = telemachus). The most common haplotype (large circle) comprises central and eastern Turkish individuals of nogelii, 'nesimachus' and 'dobrogensis', as well as a single nesimachus from Israel.
Figure 5 from: Nazari V, ten Hagen W (2020) Molecular taxonomy of Tomares hairstreaks (Lepidoptera, Lycaenidae, Theclinae). Deutsche Entomologische Zeitschrift 67(1): 19-33. https://doi.org/10.3897/dez.67.50252
Figure 5 Bayesian phylogeny of selected Tomares sequences based on combined data (COI + EF-1α). Values above branches are bootstrap support obtained under Parsimony and Likelihood criteria for each node, and values below branches are Bayesian posterior probabilities. Images: 1) ballus wth013 Morocco, 2) ballus wth055 Spain, 3) mauritanicus wth017 Morocco, 4) fedtchenkoi wth020 Kyrgyzstan, 5) callimachuscallimachus wth051 Azerbaijan, 6) callimachushafis wth053 Iran, 7) desinens wth042 Iran, 8) dobrogensis wth080 Crimea, 9) nogelii zma153 Turkey, 10) nesimachus wth065 Syria, 11) romanoviobscura zma161 Turkey, 12) romanovicachetinus zma146 Azerbaijan, 13) romanoviromanovi wth010 Armenia, 14) telemachus wth005 Turkmenistan.
Supplementary material 1 from: Nazari V, ten Hagen W (2020) Molecular taxonomy of Tomares hairstreaks (Lepidoptera, Lycaenidae, Theclinae). Deutsche Entomologische Zeitschrift 67(1): 19-33. https://doi.org/10.3897/dez.67.50252
SI 1. Material examined and Genbank accessions.
Supplementary material 3 from: Nazari V, ten Hagen W (2020) Molecular taxonomy of Tomares hairstreaks (Lepidoptera, Lycaenidae, Theclinae). Deutsche Entomologische Zeitschrift 67(1): 19-33. https://doi.org/10.3897/dez.67.50252
SI 3. Androconia, forewing upperside and hindwing underside in select Tomares species.
Supplementary material 2 from: Wang P, Che J, Liu Q, Li K, Jin JQ, Jiang K, Shi L, Guo P (2020) A revised taxonomy of Asian snail-eating snakes Pareas (Squamata, Pareidae): evidence from morphological comparison and molecular phylogeny. ZooKeys 939: 45-64. https://doi.org/10.3897/zookeys.939.49309
Appendix S2
Supplementary material 1 from: Wang P, Che J, Liu Q, Li K, Jin JQ, Jiang K, Shi L, Guo P (2020) A revised taxonomy of Asian snail-eating snakes Pareas (Squamata, Pareidae): evidence from morphological comparison and molecular phylogeny. ZooKeys 939: 45-64. https://doi.org/10.3897/zookeys.939.49309
Appendix S1
Supplementary material 4 from: Wang P, Che J, Liu Q, Li K, Jin JQ, Jiang K, Shi L, Guo P (2020) A revised taxonomy of Asian snail-eating snakes Pareas (Squamata, Pareidae): evidence from morphological comparison and molecular phylogeny. ZooKeys 939: 45-64. https://doi.org/10.3897/zookeys.939.49309
Figure 1
Figure 3 from: Wang P, Che J, Liu Q, Li K, Jin JQ, Jiang K, Shi L, Guo P (2020) A revised taxonomy of Asian snail-eating snakes Pareas (Squamata, Pareidae): evidence from morphological comparison and molecular phylogeny. ZooKeys 939: 45-64. https://doi.org/10.3897/zookeys.939.49309
Figure 3 The comparisons of dorsal head (row 1) and median dorsal (row 2) between Pareas macularius and P. margaritophorus. AP. margaritophorusBP. macularius.
Figure 2 from: Wang P, Che J, Liu Q, Li K, Jin JQ, Jiang K, Shi L, Guo P (2020) A revised taxonomy of Asian snail-eating snakes Pareas (Squamata, Pareidae): evidence from morphological comparison and molecular phylogeny. ZooKeys 939: 45-64. https://doi.org/10.3897/zookeys.939.49309
Figure 2 Bayesian inference(left) and Maximum Likelihood(right) trees of the Pareidae based on mtDNA dataset. Branch support measures are Bayesian posterior probabilities and ML bootstrap support respectively. Branch support indices are not given for most intrageneric nodes to preserve clarity.
Supplementary material 3 from: Wang P, Che J, Liu Q, Li K, Jin JQ, Jiang K, Shi L, Guo P (2020) A revised taxonomy of Asian snail-eating snakes Pareas (Squamata, Pareidae): evidence from morphological comparison and molecular phylogeny. ZooKeys 939: 45-64. https://doi.org/10.3897/zookeys.939.49309
Appendix S3
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.