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Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
996
datasets available to search
ShareScore release 0.9.0
Dataset results
996 results for “mouse brain”
CXCR6 orchestrates brain CD8+ T cell residency and limits mouse Alzheimer’s disease pathology [scRNA-seq2]
GEO Series GSE207701. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Lamivudine modulates the expression of neurological impairment-related genes and LINE-1 retrotransposons in brain tissues of a down syndrome mouse model
GEO Series GSE252135. Mus musculus. 94 samples. Type: Expression profiling by high throughput sequencing.
Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA190214_11E]
GEO Series GSE135534. Mus musculus. 1284 samples. Type: Methylation profiling by high throughput sequencing.
Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA190219_9H]
GEO Series GSE135570. Mus musculus. 1319 samples. Type: Methylation profiling by high throughput sequencing.
Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA180329_4F]
GEO Series GSE132445. Mus musculus. 1345 samples. Type: Methylation profiling by high throughput sequencing.
Gene expression in the mouse brain following early pregnancy exposure to ethanol [Hippocampus_Males_P21]
GEO Series GSE87703. Mus musculus. 12 samples. Type: Expression profiling by array.
Multi-modal single cell analysis reveals gut microbiota reshapes brain immune landscape in aged mouse model
GEO Series GSE148127. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing; Other.
Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA190625_10E]
GEO Series GSE157868. Mus musculus. 484 samples. Type: Methylation profiling by high throughput sequencing.
ER-stress response in retinal Müller glia occurs significantly earlier than amyloid pathology in in the Alzheimer’s mouse brain and retina
GEO Series GSE254524. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA180326_3E]
GEO Series GSE132405. Mus musculus. 1191 samples. Type: Methylation profiling by high throughput sequencing.
RNA-seq experiment on five mouse brain regions--hypothalamus, hippocampus, neocortex, cerebellum, and the amygdala --comparing expression in virgin females to primiparous females three weeks after pup
GEO Series GSE125428. Mus musculus. 80 samples. Type: Expression profiling by high throughput sequencing.
Heterochronic parabiosis reprograms the mouse brain transcriptome by shifting aging signatures in multiple cell types
GEO Series GSE222510. Mus musculus. 56 samples. Type: Expression profiling by high throughput sequencing.
Crnic Institute Human Trisome Project - Trisomy 21 Model Atlas: PolyA RNA-seq from adult mouse brain hippocampus
GEO Series GSE272567. Mus musculus. 17 samples. Type: Expression profiling by high throughput sequencing.
Microarray analysis of Wild-type vs. Brpf1-deficient P4 mouse brain
GEO Series GSE63909. Mus musculus. 3 samples. Type: Expression profiling by array.
Temporal analysis of enhancers during mouse brain development reveals dynamic regulatory function and identifies novel regulators of cerebellar development.
GEO Series GSE183697. Mus musculus. 18 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Expression profile of lncRNAs and mRNAs in 4 brain regions of adult mouse
GEO Series GSE106832. Mus musculus. 12 samples. Type: Expression profiling by array; Non-coding RNA profiling by array.
Droplet-based high-throughput 3D genome structure mapping of single cells with simultaneous transcriptomics (b12-mouse-brain)
GEO Series GSE285232. Mus musculus. 1 samples. Type: Other.
m6A peaks in mouse brain sample.
GEO Series GSE100492. Mus musculus. 4 samples. Type: Other.
Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA180426-8B]
GEO Series GSE134474. Mus musculus. 1287 samples. Type: Methylation profiling by high throughput sequencing.
Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA180910_5J]
GEO Series GSE134593. Mus musculus. 959 samples. Type: Methylation profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.