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1,913 results for “single cell RNA sequencing”

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geo24/100

Single-cell RNA sequencing reveals recruitment of the M2-like CCL8high macrophages in Lewis lung carcinoma-bearing mice following hypofractionated radiotherapy

GEO Series GSE256051. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2024View details →
geo24/100

Characterization of the cutaneous tumor microenvironment of advanced-stage mycosis fungoides using single-cell RNA sequencing

GEO Series GSE206123. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2023View details →
geo24/100

Single cell RNA-sequencing on blood cells from Drosophila lymph glands [scRNA-seq]

GEO Series GSE168819. Drosophila melanogaster. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2021View details →
geo24/100

A mannitol-based buffer improves single-cell RNA sequencing of high-salt marine cells

GEO Series GSE292926. Ciona robusta. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2025View details →
geo24/100

An optimized protocol for retina single-cell RNA sequencing [snRNA-Seq]

GEO Series GSE153672. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2020View details →
geo24/100

Single cell RNA sequencing profile of progeny of a unique mesenchymal progenitor subset traced to adult mouse skeletal muscle

GEO Series GSE180416. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2022View details →
geo24/100

Distinct immune features in the partial remission phase of type 1 diabetes identified through Single-Cell RNA Sequencing and Functional Analysis

GEO Series GSE221297. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2024View details →
geo24/100

Single Cell and Bulk RNA Sequencing Analysis on the Effects of Cytoskeletal Modulation on Stem Cell Derived Pancreatic Progenitors

GEO Series GSE137659. Homo sapiens. 26 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2020View details →
geo24/100

Single-cell RNA sequencing of breast cancer cells from fresh fixed (FF) and formalin-fixed paraffin-embedded (FFPE) tissue identified multi-ciliary cells

GEO Series GSE278793. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2025View details →
geo24/100

Single-cell RNA sequencing reveals the cellular and molecular heterogeneity of treatment-naïve primary osteosarcoma in dogs

GEO Series GSE252470. Canis lupus familiaris. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2024View details →
geo24/100

Single-cell and bulk RNA sequencing of mouse atherosclerosis disease stage course [aorta_bulkRNA-Seq]

GEO Series GSE205929. Mus musculus. 23 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2023View details →
geo24/100

Single cell RNA-sequencing of 75-day old human H1 and H9 embryonic stem cell-derived cerebral organoids

GEO Series GSE124174. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2019View details →
geo24/100

Deciphering the heterogeneity of differentiating hPSC-derived corneal limbal stem cells through single-cell RNA-sequencing [scRNA-seq]

GEO Series GSE248496. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2024View details →
geo24/100

Analysis of deficiency of adenosine deaminase 2 pathogenesis based on single cell RNA sequencing of monocytes

GEO Series GSE142444. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2021View details →
geo24/100

Quantitative single-cell RNA-sequencing for alcohol- and formalin-fixed tissue sections with DRaqL; an efficient RNA recovery and cDNA amplification method for laser capture microdissection

GEO Series GSE192551. Mus musculus. 577 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2023View details →
geo24/100

Single Cell RNA sequencing of blood leukocytes from IL1rn-deficient mice

GEO Series GSE181243. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2022View details →
geo24/100

Single-cell RNA sequencing of OCI-Ly18 tumors treated with CART19 plus vehicle (DMSO) or CART19 plus Venetoclax

GEO Series GSE195814. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2022View details →
geo24/100

Single-cell RNA-sequencing analysis for the molecular taxonomy of primate Anterior cingulate cortex (ACC) and Retro splenial cortex (RSC), as well as rodents

GEO Series GSE183052. Macaca mulatta; Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2024View details →
geo24/100

Live single-cell RNA-sequencing data from ALS donors only.

GEO Series GSE204704. Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2025View details →
geo24/100

The Peripheral Atf3+ Neuronal Population is Responsible for Nerve Regeneration at Early Stage of Nerve Injury Revealed by Single-Cell RNA Sequencing

GEO Series GSE255014. Mus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2024View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record