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635
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ShareScore release 0.9.0
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635 results for “comparative phylogenetics”
Data from: Can long-range PCR be used to amplify genetically divergent mitochondrial genomes for comparative phylogenetics? A case study within spiders (Arthropoda: Araneae).
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Data from: Detecting adaptive evolution in phylogenetic comparative analysis using the Ornstein-Uhlenbeck model
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Data from: Comparative analysis of Begonia plastid genomes and their utility for species-level phylogenetics
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Data from: Comparing the rates of speciation and extinction between phylogenetic trees
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Data from: Likelihood-based parameter estimation for high-dimensional phylogenetic comparative models: overcoming the limitations of 'distance-based' methods
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Data from: Inferring bounded evolution in phenotypic characters from phylogenetic comparative data
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Data from: Comparative genomics to explore phylogenetic relationship, cryptic sexual potential and host specificity of Rhynchosporium species on grasses
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Data from: Interpreting the evolutionary regression: the interplay between observational and biological errors in phylogenetic comparative studies
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Data from: A penalized likelihood framework for high- dimensional phylogenetic comparative methods and an application to new-world monkeys brain evolution
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Data from: A novel Bayesian method for inferring and interpreting the dynamics of adaptive landscapes from phylogenetic comparative data
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Generalized hidden Markov models for phylogenetic comparative datasets
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Comparative analyses of phenotypic sequences using phylogenetic trees
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Figure 5 from: Zhongying Q, Huihui C, Hao Y, Yuan H, Huimeng L, Xia L, Xingchun G (2020) Comparative mitochondrial genomes of four species of Sinopodisma and phylogenetic implications (Orthoptera, Melanoplinae). ZooKeys 969: 23-42. https://doi.org/10.3897/zookeys.969.49278
Figure 5 The phylogenetic tree based on 37 mitochondrial genes. (A) ML tree; (B) BI tree.
Figure 2 from: Zhongying Q, Huihui C, Hao Y, Yuan H, Huimeng L, Xia L, Xingchun G (2020) Comparative mitochondrial genomes of four species of Sinopodisma and phylogenetic implications (Orthoptera, Melanoplinae). ZooKeys 969: 23-42. https://doi.org/10.3897/zookeys.969.49278
Figure 2 The relative synonymous codon frequencies from the four species.
Figure 4 from: Zhongying Q, Huihui C, Hao Y, Yuan H, Huimeng L, Xia L, Xingchun G (2020) Comparative mitochondrial genomes of four species of Sinopodisma and phylogenetic implications (Orthoptera, Melanoplinae). ZooKeys 969: 23-42. https://doi.org/10.3897/zookeys.969.49278
Figure 4 The main repeat elements in A+T-rich regions from four species.
Figure 1 from: Zhongying Q, Huihui C, Hao Y, Yuan H, Huimeng L, Xia L, Xingchun G (2020) Comparative mitochondrial genomes of four species of Sinopodisma and phylogenetic implications (Orthoptera, Melanoplinae). ZooKeys 969: 23-42. https://doi.org/10.3897/zookeys.969.49278
Figure 1 Circular map of the mitogenome from four species.
Figure 1 from: Sun C-H, Huang Q, Zeng X-S, Li S, Zhang X-L, Zhang Y-N, Liao J, Lu C-H, Han B-P, Zhang Q (2022) Comparative analysis of the mitogenomes of two Corydoras (Siluriformes, Loricarioidei) with nine known Corydoras, and a phylogenetic analysis of Loricarioidei. ZooKeys 1083: 89-107. https://doi.org/10.3897/zookeys.1083.76887
Figure 1 Gene maps of the two newly sequenced Corydoras species.
Figure 8 from: Chen Z-T (2022) Comparative mitogenomic analysis of two earwigs (Insecta, Dermaptera) and the preliminary phylogenetic implications. ZooKeys 1087: 105-122. https://doi.org/10.3897/zookeys.1087.78998
Figure 8 Predicted structural elements in the control region of Diplatys flavicollis.
Figure 7 from: Chen Z-T (2022) Comparative mitogenomic analysis of two earwigs (Insecta, Dermaptera) and the preliminary phylogenetic implications. ZooKeys 1087: 105-122. https://doi.org/10.3897/zookeys.1087.78998
Figure 7 Predicted structural elements in the control regions of Apachyus feae.
Figure 3 from: Chen Z-T (2022) Comparative mitogenomic analysis of two earwigs (Insecta, Dermaptera) and the preliminary phylogenetic implications. ZooKeys 1087: 105-122. https://doi.org/10.3897/zookeys.1087.78998
Figure 3 Relative synonymous codon usage (RSCU) of PCGs in six species of earwigs.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.