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4,480 results for “hybrid”

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dryad36/100

High sexual display trait diversity without measured genetic divergence in a montane hybrid zone involving young species (Habronattus americanus subgroup, Araneae, Salticidae)

<p>Genetic introgression, allele exchange across species boundaries, is a commonly recognized feature of animal evolution. Under such a paradigm contemporary contact zones provide first-hand and complementary insight into the geographic, phenotypic, and genetic details of introgression. Also, when mate choice phenotypes are conspicuous and variable in hybrids, contact zones provide potential insight into how sexual selection interacts with species boundary maintenance, particularly when postzygotic reproductive isolation is weak. The <em>Habronattus</em> <em>americanus</em> subgroup includes several recently evolved jumping spider species, with an estimated age of about 200,000 years, and substantial evidence for hybridization and introgression. We explored a contact zone involving <em>H. americanus</em> (Keyserling, 1885) and <em>H. kubai</em> (Griswold, 1979) on Mount Shasta, California, in alpine habitats that would have been unavailable (under ice) at the Last Glacial Maximum. We characterized morphological diversity within the contact zone, including the fine-scale geographic distribution of hybrid and parental individuals, and assessed genetic variation using ddRADseq data. Combined results indicate a lack of measured genomic differentiation between specimens with distinct morphologies, including individuals with phenotypes of the parental species. We identified a diverse array of hybrid morphologies, with phenotypic evidence for backcrossing, essentially forming a phenotypic bridge between parental taxa. The study area is characterized by more hybrid than parental individuals, with a significantly larger number of red-palped morphologies than white and/or yellow-palped morphologies; the novel, white-palped phenotype is perhaps transgressive. Overall, these results contribute to a better understanding of the expected ebb and flow of lineage interactions during the early stages of speciation.</p>

opencc-zeroJan 2024View details →
zenodo36/100

Hybridized, Physics-Based Melt Detection for 13 Antarctic sites v2

<p>An (updated) dataset of 13 Antarctic sites with microwave grain size (exponential correlation lengths/p_exp) as well as melt day detection using the Hybrid Method. The Hybrid Method combines the Community Firn Model and the Snow Microwave Radiative Transfer model with AMSR-2 to detect melt days.&nbsp;</p>

opencc-by-4.0Jan 2023View details →
zenodo36/100

''Do you have time for a quick call?": Exploring Remote and Hybrid Requirements Engineering Practices and Challenges in Industry

<p>This replication package contains the survey and interview questions, list of codes derived from the analysis, and the survey respondent demographics from the paper titled&nbsp;<em><strong>''Do you have time for a quick call?": Exploring Remote and Hybrid Requirements Engineering Practices and Challenges in Industry </strong></em>accepted to International Requirements Engineering Conference 2024.&nbsp;</p>

opencc-by-4.0Jan 2024View details →
zenodo36/100

Toward a Quality Model for Hybrid Intelligence Teams - Supplementary Material

<p>Supplementary material for paper:</p> <div><span>Dell&rsquo;Anna D, Murukannaiah PK, Dudzik B, Grossi D, Jonker CM, Oertel C, et al.</span> <span>Toward a Qual</span><span>ity Model for Hybrid Intelligence Teams.</span> <span>In: Proceedings of the 23rd International Conference on </span><span>Autonomous Agents and MultiAgent Systems, AAMAS 2024<br><br></span> <div>&nbsp;</div> </div> <div> <div># GENERAL INFORMATION</div> <div>&nbsp;</div> <div>&nbsp;</div> <div>## Title</div> <div>&nbsp;</div> <div>Supplementary material for paper "Toward a Quality Model for Hybrid Intelligence Teams"</div> <div>&nbsp;</div> <div>&nbsp;</div> <div># FILE OVERVIEW</div> <div>&nbsp;</div> <div>```</div> <div>AAMAS2024_Toward_HI_Quality_Model_Supplementary_Material</div> <div>│&nbsp; &nbsp;README.md</div> <div>│&nbsp; &nbsp;Group Discussion - Handout - Essentials # The printed version of the questionnaires (Essentials) and team descriptions handed out to the groups for the group discussion</div> <div>│&nbsp; &nbsp;Group Discussion - Handout - Enablers # The printed version of the questionnaires (Enablers, except Coaching) and team descriptions handed out to the groups for the group discussion</div> <div>│&nbsp; &nbsp;Group Discussion - Handout - Processes # The printed version of the questionnaires (Coaching and Key Task Processes) and team descriptions handed out to the groups for the group discussion</div> <div>│&nbsp; &nbsp;Individual Response - Online Survey # A PDF version of the online survey</div> <div>└───Individual Response - Results&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;# Excel file with all the responses of the participants from the online survey. Excel sheets are organized as follows</div> <div>RAW DATA&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; # all the raw data from the survey</div> <div>RAW DATA TRANSPOSED&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;# raw data with rows and columns inverted</div> <div>ALL TEAMS SCORES&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; # quantitative results about adequacy for each feature: team scores and importance</div> <div>ALL FEEDBACK PER FEATURE&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; # qualitative results about adequacy for each feature: grouped feedback participants</div> <div>forlatex&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; # results in latex-ready form</div> <div>forspider&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;# results in a form that supports easy creation of spider plot</div> <div>EFFECTIVENESS&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;# quantitative results about effectiveness measures</div> <div>FINAL COMMENTS&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; # final qualitative feedback from participants</div> <div>essentials&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; # RAW DATA TRANSPOSED (essentials only)</div> <div>enablers&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; # RAW DATA TRANSPOSED (enablers only)</div> <div>processes&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;# RAW DATA TRANSPOSED (processes only)</div> <div>*_num_scores&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; # * in {essentials, enablers, processes}, likert-to-numerical scores</div> <div>*_num_scores_annotatio&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; # same as *_num_scores, just with numerical values instead of formulas</div> <div>```</div> <div>&nbsp;</div> <div>&nbsp;</div> <div>&nbsp;</div> <div>&nbsp;</div> </div>

opencc-by-4.0Jan 2024View details →
dryad36/100

Supplemental Data for: Lineage diversification and rampant hybridization among subspecies explain taxonomic confusion in the endemic Hawaiian fern Polypodium pellucidum

<p><strong><span>Premise:</span></strong><span> <em>Polypodium pellucidum</em>, a fern endemic to the Hawaiian Islands, encompasses a broad spectrum of morphological and ecological variation, suggesting a complex history involving divergence and hybridization. In contrast to angiosperm systems, spore dispersal in ferns presents a unique opportunity to study how highly dispersible organisms diversify in the dynamic landscape of the archipelago.</span></p> <p><strong><span>Key Results: </span></strong><span>We infer <em>P. pellucidum</em> is monophyletic, dispersing to the Hawaiian archipelago 11.53 to 7.77 Mya, with diversification into extant clades 5.66 to 4.73 Mya. We identify four non-hybrid clades with unique morphologies, ecological niches, and distributions. Additionally, we elucidate several intraspecific hybrid combinations and evidence for undiscovered or extinct 'ghost' lineages contributing to extant hybrids populations. </span></p> <p><strong><span>Conclusions:</span></strong><span> We provide a roadmap for revising the taxonomy of <em>P. pellucidum</em> to account for cryptic lineages and intraspecific hybrids. Geologic succession of the Hawaiian Islands through cycles of volcanism, vegetative succession, and erosion has determined the available habitats and distribution of ecologically specific divergent clades within <em>P. pellucidum, </em>with intraspecific hybrids arising as a result of ecological and or geological transitions, often persisting after the local extinction of their progenitors. This research contributes to our understanding of the evolution of Hawaii's diverse fern flora and allows for better conservation efforts that are often complicated by the presence of cryptic taxa and hybridization.</span></p>

opencc-zeroJan 2024View details →
zenodo36/100

Triarylamine modulation for hybrid perovskite photovoltaics

<p>Structural, optoelectronic, photovoltaic, and supplementary characterization data for &ldquo;Triarylamine modulation for hybrid perovskite photovoltaics&rdquo;, DOI:10.1002/admi.202301053<br>Figure_2_XRD.opju: Data described in Figure 2 (XRD patterns) as Origin (.opju) software file.<br>Figure_2_XPS.opju: Data described in Figure 2 (XPS spectra) as Origin (.opju) software file.<br>Figure_2_UV-vis.opju: Data described in Figure 2 (UV-vis spectra) as Origin (.opju) software file.<br>Figure_2_Tauc_plot.opju: Data described in Figure 2 (Tauc plot) as Origin (.opju) software file.<br>Figure_3_PV.opju: Data described in Figure 3 (Photovoltaics metrics) as Origin (.opju) software file.<br>Figure_4_TRPL.opju: Data described in Figure 4 (TRPL) as Origin (.opju) software files.<br>Figure_4_PL_no_spiro.opju: Data described in Figure 4 (steady state PL) as Origin (.opju) software files<br>Figure_4_PL_with_spiro.opju: Data described in Figure 4 (steady state PL with spiro-OMeTAD) as Origin (.opju) software files<br>Figure_5_stability.opju: Data described in Figure 5 (operational stability) as Origin (.opju) software files.<br>Figures_SI.zip: Data described in the Supporting Information Figures S2 (FTIR spectra data as Origin (.opju) software file); Figures S5a (JV curve for champion devices as Origin (.opju) software file); Figures S5b (IPCE as Origin (.opju) software file); Figures S6 (Supplementary photovoltaic metrics as Origin (.opju) software file).<br><br></p>

opencc-by-4.0Mar 2024View details →
dryad36/100

The spatial ecology of Mojave Rattlesnakes (Crotalus scutulatus), Prairie Rattlesnakes (C. viridis), and their hybrids in southwestern New Mexico

<p>Hybridization between species provides unique opportunities to understand evolutionary processes that are linked to reproductive isolation and ultimately speciation. The extrinsic factors that limit hybridization, however, are poorly understood for most animal systems. Although the spatial ecology of individuals in natural habitats is fundamental to shaping reproductive success and survival, analyses of the spatial ecology of hybrids and their parental groups are rarely reported. Here we used radiotelemetry to monitor wild rattlesnakes across an interspecific hybrid zone (<em>Crotalus scutulatus </em>and <em>C. viridis</em>) and measured movement parameters and space use (Utilization Distributions, UDs) of individuals to evaluate the hypothesis that hybridization resulted in transgressive or atypical movement patterns. Unexpectedly, of the spatial metrics we investigated, we found that hybrids were very similar to parental individuals. Nonetheless, hybrids did show increased patchiness of core UDs, but this result is likely driven by increased habitat patchiness in the hybrid zone. Overall, we did not find evidence for overt extrinsic barriers to hybridization associated with spatial ecology; thus, we suggest that the close evolutionary history between the two parental species—and their ecological and behavioral similarities—likely increases the probability of hybridization events in this unique region of New Mexico.</p>

opencc-zeroMar 2024View details →
zenodo36/100

Data and Codes for "Non-local transport measurements in hybrid quantum Hall - superconducting devices"

<p>Datasets and processing code for reproduction of "Non-local transport measurements in hybrid quantum Hall - superconducting devices".</p>

opencc-by-4.0Mar 2024View details →
dryad36/100

Reduced hybrid survival in a migratory divide between songbirds

<p>Migratory divides, hybrid zones between populations that use different seasonal migration routes, are hypothesized to contribute to speciation. Specifically, relative to parental species, hybrids at divides are predicted to exhibit intermediate migratory behavior and reduced fitness as a result. We provide the first direct test of the second prediction here with one of the largest existing avian tracking datasets, leveraging a divide between Swainson's thrushes where the first prediction is supported. Using detection rates as a proxy for survival, our results supported the migratory divide hypothesis with lower survival rates for hybrids than parental forms. This finding was juvenile-specific (vs. adults), suggesting selection against hybrids is stronger earlier in life. Reduced hybrid survival was not explained by selection against intermediate phenotypes or negative interactions among phenotypes. Additional work connecting specific features of migration is needed, but these patterns provide strong support for migration as an ecological driver of speciation.</p>

opencc-zeroMar 2024View details →
dryad36/100

Data from: Hybrids of two destructive subterranean termites established in the field, revealing a potential for gene flow between species

<p>Hybridization between invasive pest species may lead to significant genetic and economic impacts that require close monitoring. The two most invasive and destructive termite species worldwide, <em>Coptotermes formosanus</em> Shiraki and <em>Coptotermes gestroi</em> (Wasmann), have the potential for hybridization in the field. A three-year field survey conducted during the dispersal flight season of <em>Coptotermes</em> in Taiwan identified alates with atypical morphology, which were confirmed as hybrids of the two <em>Coptotermes</em> species using microsatellite and mitochondrial analyses. Out of 27,601 alates collected over three years, 4.4% were confirmed as hybrid alates, and some advanced hybrids (&gt;F1 generations) were identified. The hybrid alates had a dispersal flight season that overlapped with the two parental species 13 out of 15 times. Most of the hybrid alates were females, implying that mating opportunities beyond F1 may primarily be possible through female hybrids. However, the incipient colony growth results from all potential mating combinations suggest that only backcross colonies with hybrid males could sometimes lead to brood development. The observed asymmetrical viability and fertility of hybrid alates may critically reduce the probability of advanced-hybrid colonies being established in the field.</p>

opencc-zeroMar 2024View details →
zenodo36/100

Dataset for publication "Decoding Niobium Carbide MXene Dual Functional Photoactive Cathode in Photoenhanced Hybrid Zinc-Ion Capacitor"

<p>This is a dataset for publication "Decoding Niobium Carbide MXene Dual-Functional Photoactive Cathode in Photoenhanced Hybrid Zinc-Ion Capacitor". It contains all relevant data from the aforementioned publication. The details about how to read these data is contained within the readme file.</p>

opencc-by-4.0Mar 2024View details →
zenodo36/100

Vesicle and reaction-diffusion hybrid modeling with STEPS

<p>This repository, a snapshot from Github public repository <a href="https://github.com/CNS-OIST/STEPS_Validation/tree/main/vesicles">https://github.com/CNS-OIST/STEPS_Validation/vesicles</a>, contains all data and modeling scripts to reproduce the data presented in:&nbsp;</p> <p>Iain Hepburn, Jules Lallouette, Weiliang Chen, Andrew R. Gallimore, Sarah Y. Nagasawa-Soeda, Erik De Schutter (2024) Vesicle and reaction-diffusion hybrid modeling with STEPS. Communications Biology 7(1):573. doi:10.1038/s42003-024-06276-5</p> <p>The repository contains README files with instruction for how to run the model scripts and reproduce the figures.</p> <p>The work presented is based on the simulator STochastic Engine for Pathway Simulation (STEPS) version 5.0.1, which is publicly availble from: https://github.com/CNS-OIST/STEPS/releases/tag/5.0.1&nbsp;</p> <p>&nbsp;</p>

opencc-by-4.0Apr 2024View details →
zenodo36/100

F I G U R E 4 in Genetic characteristics and growth patterns of the hybrid grouper derived from the hybridization of Epinephelus fuscoguttatus (female) Epinephelus polyphekadion (male)

F I G U R E 4 Examples of functional secondary structures of the 5S gene

opencc-by-4.0Nov 2022View details →
zenodo36/100

DArTseq genetic dataset associated with the article "Hybrids as mirrors of the past: genomic footprints reveal spatio-temporal dynamics and extinction risk of alpine extremophytes in the mountains of Central Asia"

<p>Description: This file stores genetic information on the single nucleotide polymorphism markers (SNPs) in the examined alkali grasses (Poaceae: Puccinellia). The dataset was generetad by Genome-Wide Restriction Fragment Analysis via the DArTseq platform (Diversity Arrays Technology Pty Ltd, Canberra, Australia), which combines complexity reduction methods, fragment size selection, and high-throughput sequencing, optimised for a target organism. The file contains raw data.<br>&nbsp;<br>Usage notes: We used R (version 4.2.2, 2022-10-31; https://www.R-project.org/) and RStudio (version 2022.07.2+576 "Spotted Wakerobin" Release (e7373ef832b49b2a9b88162cfe7eac5f22c40b34, 2022-09-06; http://www.rstudio.com/) on Windows 8.1 to handle this file. We used the dartR R-package (version 2.7.2) with necessary dependencies to import, proccess and analyse this data file as an object of a class genlight (dartR) in the R environment. You may also handle the file as an object of a class genlight using the adegenet and ade4 R-packages. To learn more about installation procedure and how to use of the R-packages visit: https://cran.r-project.org/web/packages/available_packages_by_name.html.<br>&nbsp; &nbsp;&nbsp;</p>

opencc-by-4.0Apr 2024View details →
zenodo36/100

A Conserved Inhibitory Interdomain Interaction Regulates DNA-binding Activities of Hybrid Two-component Systems in Bacteroides

<p>The study reveals a highly conserved inhibitory mechanism to regulate the activities of hybrid two-component systems (HTCSs) in <em>Bacteroides</em>. HTCSs comprise a major class of transcription regulators of polysaccharide utilization genes in <em>Bacteroides</em>. A conserved sequence motif has been discovered to correlate with the interdomain arrangement of HTCS domains. Presence or absence of this motif is likely predictive of the regulatory mechanism evolved for utilization of different glycans.</p> <p>&nbsp;</p> <p>This dataset includes sequence analyses and structure predictions of HTCSs.</p> <p>List of files:</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; AlphaFold-HTCS-RR.zip&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; &nbsp; &nbsp;&nbsp; AlphaFold results of all HTCS-RR fragments in <em>B. theta</em></p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; AlphaFold-HTCS-cyto-dimer.zip&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; AlphaFold results of all HTCS-cyto dimers in <em>B. theta</em></p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; HTCSbacteroides-MAFFT-fasta&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Sequence alignment of 6908 HTCSs from <em>Bacteroides</em></p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; HMM-AllHTCS.hmm&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; HMM of HTCSs generated from the MAFFT alignment</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; HMM-DBD-PF12833&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; HMM of HTH18 (Pfam: PF12833) from Interpro</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; HMM-REC-PF00072&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; HMM of REC (Pfam: PF00072) from Interpro</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; B_theta_RR_fasta&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Sequence alignment of 32 HTCS-RRs in <em>B. theta</em></p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; B_theta_RR-tree&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; A neighbor-joining phylogenetic tree of 32 HTCS-RRs in <em>B. theta</em>&nbsp;&nbsp;&nbsp;</p>

opencc-by-4.0Apr 2024View details →
zenodo36/100

Dataset for "Reconfigurable spin-wave platform based on interplay between nanodots and waveguide in hybrid magnonic crystal"

<p>The dataset consist of the data used to prepare the figures for the manuscript:&nbsp;</p> <p>Krzysztof Szulc, Mateusz Zelent, Maciej Krawczyk<br><em>Reconfigurable spin-wave platform based on interplay between nanodots and waveguide in hybrid magnonic crystal.</em></p> <p>together with animated version of two figures: Figure 4 and Figure S1.</p> <p>Please read README.txt file to see the description of the data in the files.</p>

opencc-by-4.0Apr 2024View details →
dryad36/100

A novel hybrid beachgrass is invading U.S. Pacific Northwest dunes with potential ecosystem consequences

<p>Invasive plants formed via hybridization, especially those that modify the structure and function of their ecosystems, are of particular concern given the potential for hybrid vigor. In the U.S. Pacific Northwest, two invasive, dune-building beachgrasses, <em>Ammophila arenaria</em> (European beachgrass) and <em>A. breviligulata</em> (American beachgrass) have hybridized and formed a new beachgrass taxa (<em>Ammophila arenaria</em> × <em>A. breviligulata</em>) but little is known about its distribution, spread, and ecological consequences. Here we report on surveys of the hybrid beachgrass conducted across a 250-km range from Moclips, Washington to Pacific City, Oregon in 2021 and 2022. We detected nearly 300 hybrid individuals, or an average of 8–14 hybrid individuals per km of surveyed foredune. The hybrid was more common at sites within southern Washington and northern Oregon where <em>A. breviligulata</em> is abundant (75–90% cover) and <em>A. arenaria</em> is sparse and patchy. The hybrid displayed morphological traits such as shoot density and height that typically exceeded its parent species suggesting hybrid vigor. We measured an average growth rate of 30% over one year, with individuals growing faster at the leading edge of the foredune, nearest the beach. We also found a positive relationship between hybrid abundance and that of <em>A. arenaria</em>, suggesting that <em>A. arenaria</em> density may be a controlling factor for hybridization rate. The hybrid showed similar sand deposition and associated plant species richness patterns compared to its parent species, although longer-term studies are needed. Finally, we found hybrid individuals within and near conservation habitat of two Endangered Species Act-listed, threatened bird species, the western snowy plover (<em>Charadrius alexandrinus nivosus</em>) and the streaked horned lark (<em>Eremophila alpestris strigata</em>), a concern for conservation management. Documenting this emerging hybrid beachgrass provides insights into how hybridization affects the spread of novel species and the consequences for communities in which they invade.</p>

opencc-zeroMar 2024View details →
zenodo36/100

Flux-Tunable Hybridization in a Double Quantum Dot Interferometer

<p>Code and datasets associated with the manuscript "Flux-Tunable Hybridization in a Double Quantum Dot Interferometer". With the code and data included here, all necessary fits and analysis can be conducted to produce the figures given in the manuscript and its supplementary material.</p> <p>Version 2: Improvements to analysis code and a correction to figure S5. See README.md for details. This version corresponds to the version accompanying the paper as submitted to a scientific journal.</p> <p>Version 3: Added the code for generating the newly added Figure 7 to make_figures.ipynb.</p>

opencc-by-4.0May 2023View details →
zenodo36/100

Table 2 in Altai Mountains - cradle of hybrids and introgressants: A case study in Veronica subg. Pseudolysimachium (Plantaginaceae)

<p><b>Table 2.</b> Details of AMOVA in each group with different combination without including the putative hybrid.</p><table><tbody><tr><th></th><th>Source of variation</th><th>Variance components</th><th>Percentage of variation</th><th>Fixation index</th></tr></tbody><tbody><tr><th>Global AMOVA based on <i>K</i> = 5 results of STRUCTURE including all the putative pure 174 individuals</th><td>Among Species</td><td>14</td><td>16</td><td></td></tr><tr><td>Within Species</td><td>74</td><td>84</td><td></td></tr><tr><td>TOTAL</td><td>88</td><td>100</td><td><i>F</i> ST: 0.16*</td></tr><tr><th>Hierarchical AMOVA based on <i>K</i> = 5 results of STRUCTURE including all the putative pure 174 individuals</th><td>Among Groups</td><td>7.2</td><td>8.13</td><td><i>F</i> CT: 0.08*</td></tr><tr><td>Among Species</td><td>7.1</td><td>8.01</td><td><i>F</i> SC: 0.09*</td></tr><tr><td>Within Species</td><td>74.3</td><td>83.86</td><td><i>F</i> ST: 0.16*</td></tr><tr><td>TOTAL</td><td>88.6</td><td>100</td><td></td></tr></tbody></table><p><i>F</i> <sub>ST</sub>, correlation within populations relative to total; <i>F</i> <sub>CT</sub>, correlation within groups relative to total; <i>F</i> <sub>SC</sub>, correlation within populations relative to groups.* <i>P</i> &lt;0.001, 10,000 permutations.</p>

opencc-by-4.0Apr 2024View details →
zenodo36/100

Table 1 in Altai Mountains - cradle of hybrids and introgressants: A case study in Veronica subg. Pseudolysimachium (Plantaginaceae)

<p><b>Table 1.</b> Details of sampled morphotypes and their geographical distribution.</p><table><tbody><tr><th>Serial no.</th><th>Species</th><th>Distribution</th><th>Latitude</th><th>Longitude</th><th>Number of individuals</th></tr></tbody><tbody><tr><th>1</th><td><i>V. &times;altaica</i></td><td>Russia</td><td>50.9158</td><td>82.3274</td><td>12</td></tr><tr><th>2</th><td><i>V. &times;grisea</i></td><td>Russia</td><td>50.6399</td><td>86.3131</td><td>9</td></tr><tr><th>3</th><td><i>V. &times;kolyvanensis</i></td><td>Russia</td><td>51.7684</td><td>82.1381</td><td>6</td></tr><tr><th>4</th><td><i>V. &times;sapozhnikovii</i></td><td>Mongolia</td><td></td><td></td><td>1</td></tr><tr><th>5</th><td><i>V. &times;schmakovii</i></td><td>Russia</td><td>50.1567</td><td>88.2953</td><td>11</td></tr><tr><th>6</th><td><i>V. &times;sessiliflora</i></td><td>Russia</td><td>50.3437</td><td>87.4315</td><td>13</td></tr><tr><th>7</th><td><i>V. &times;smirnovii</i></td><td>Mongolia</td><td>46.3533</td><td>91.2095</td><td>6</td></tr><tr><th>8</th><td><i>V. arenosa</i></td><td>Mongolia</td><td></td><td></td><td>3</td></tr><tr><th>9a</th><td><i>V. incana</i></td><td>Russia</td><td>50.6461</td><td>86.3144</td><td>10</td></tr><tr><th>9b</th><td><i>V. incana</i></td><td>Russia</td><td>51.3924</td><td>82.2084</td><td>24</td></tr><tr><th>10</th><td><i>V. longifolia</i></td><td>Russia</td><td>53.3346</td><td>84.2004</td><td>27</td></tr><tr><th>11</th><td><i>V. pinnata</i></td><td>Russia</td><td>50.3501</td><td>87.4125</td><td>22</td></tr><tr><th>12</th><td><i>V. porphyriana</i></td><td>Russia</td><td>51.0431</td><td>85.6399</td><td>36</td></tr><tr><th>13</th><td><i>V. reverdattoi</i></td><td>Russia</td><td>50.4940</td><td>91.3311</td><td>1</td></tr><tr><th>14</th><td><i>V. sajanensis</i></td><td>Russia</td><td>56.1262</td><td>92.9057</td><td>2</td></tr><tr><th>15</th><td><i>V. spicata</i></td><td>Russia</td><td>50.3605</td><td>82.2448</td><td>37</td></tr><tr><th>16</th><td><i>V. spuria</i></td><td>Russia</td><td>51.7684</td><td>82.1381</td><td>7</td></tr><tr><th>17</th><td><i>V. taigischensis</i></td><td>Russia</td><td>53.0584</td><td>93.3399</td><td>3</td></tr><tr><th>TOTAL</th><td>17 morphotypes (10 taxonomically described pure forms; 7 taxonomically described putative hybrids forms; 3 individuals were not identified, they are listed in suppl. Table S1)</td></tr></tbody></table>

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