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849
datasets available to search
ShareScore release 0.7.1
Dataset results
849 results for “linear”
Transcript copy number estimation using a mouse whole-genome oligonucleotide microarray (22k Linearity)
GEO Series GSE3508. Mus musculus. 10 samples. Type: Expression profiling by array.
CpG island mediated linear and spatial gene partitioning (ChIP-seq)
GEO Series GSE80791. Mus musculus. 0 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Third-party reanalysis.
Cellular Defense Mechanisms Show Stronger Response to Linear DNA Compared to Circular Plasmid [RNA-seq]
GEO Series GSE275387. Homo sapiens. 99 samples. Type: Expression profiling by high throughput sequencing.
Condensin DC spreads linearly and bidirectionally from recruitment sites to create loop-anchored TADs in C. elegans (RNA-seq)
GEO Series GSE168802. Caenorhabditis elegans. 6 samples. Type: Expression profiling by high throughput sequencing.
CpG island mediated linear and spatial gene partitioning (pA+ RNA-seq profile)
GEO Series GSE80797. Homo sapiens; Mus musculus. 0 samples. Type: Expression profiling by high throughput sequencing; Third-party reanalysis.
Excised linear introns regulate growth in yeast
GEO Series GSE121765. Saccharomyces cerevisiae. 10 samples. Type: Expression profiling by high throughput sequencing; Other.
Non-linear relationship between chromatin accessibility and estradiol-regulated gene expression
GEO Series GSE144580. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
CAG repeat expansion in the Huntington’s Disease gene correlates with defective linear and back-splicing [RNA-seq]
GEO Series GSE175656. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Whole-transcriptome analysis in peripheral blood mononuclear cells from patients with lipid-specific oligoclonal IgM band characterization reveals two circular RNAs and two linear RNAs as biomarkers o
GEO Series GSE159035. Homo sapiens. 8 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Altered cartilage gene expression in Aga2 OI mouse negatively impacts linear growth through Sox9 and FGF signaling
GEO Series GSE231795. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
piggyBac-Mediated Genomic Integration of Linear dsDNA-Based Library for Deep Mutational Scanning in Mammalian Cells
GEO Series GSE226719. Homo sapiens. 19 samples. Type: Other.
A20’s Linear Ubiquitin Binding Motif Restrains Pathogenic Activation of TH17/22 cells and IL-22 Driven Enteritis [scRNA-seq]
GEO Series GSE296203. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Endogenous Linear Plasmids lp28-4 and lp25 are Required for Infectivity and Restriction Protection in the Lyme Disease Spirochete Borrelia mayonii
GEO Series GSE220655. Borreliella mayonii. 3 samples. Type: Methylation profiling by high throughput sequencing.
Single-tube Linear DNA amplification (LinDA) for robust ChIP-seq
GEO Series GSE32332. Homo sapiens; Mus musculus. 19 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Fault geometry and slip distribution of the 2013 Mw 7.7 Balochistan earthquake from non-linear and linear inversions of SAR and optical data
<p>This archive contains data related to the paper “Fault geometry and slip distribution of the 2013 Mw 7.7 Balochistan earthquake from non-linear and linear inversions of SAR and optical data” by Benjamin Lauer, Raphael Grandin and Yann Klinger.</p>
Dataset for Longitudinal metabolic alterations in plasma of rats exposed to low doses of high linear energy transfer radiation
<p><span>Astronauts embarking on deep space missions are at high risk of long-term exposure to low doses of high linear energy transfer (LET) radiation, which can contribute to the development of cancer and multiple degenerative diseases. However, long term effects of exposure to low doses of high LET radiation in plasma metabolite profiles have not been elucidated. We utilized an untargeted metabolomics and lipidomics approach to analyze plasma obtained from adult male Long Evans rats to determine the longitudinal effects of low-dose proton and low-dose oxygen ion whole-body irradiation on metabolic pathways. Our findings reveal that radiation exposure induced modest changes in the metabolic profiles in plasma, 7 months after exposure. Furthermore, we identified some common metabolite dysregulations between protons and oxygen ions, which may indicate a similar mechanism of action for both radiation types.</span></p>
Global Observation-based LInear Vorticity Vertical Velocities (OLIV3) over vertical levels
<p>Observation-based Linear Vorticity Vertical Velocities (OLIV3) estimates from observation-based geostrophic velocities within the global themocline during the 1993-2019 period at annual frequency.</p> <p>The beta-plane geostrophic OLIV3 fields are computed following the indefinite depth-integrated geostrophic linear vorticity balance methodology described in <em>Cortés-Morales and Lazar, 2024, </em><em>Diego Cortés Morales, 2023 [thesis] and Cortés-Morales et al., (submitted) </em>applied to the ARMOR3D [<em>Mulet et al., 2013; https://data.marine.copernicus.eu/product/MULTIOBS_GLO_PHY_TSUV_3D_MYNRT_015_012</em>] geostrophic meridional velocities. The boundary condition used is the Ekman pumping vertical velocities computed from ERA5 wind stress [DOI: 10.24381/cds.f17050d7]. The velocity field is quality-flagged based on the relative error and interannual correlation coefficient between $w_g$ and $w_{tot}$ in an OGCM perfect model test (<em>Cortés-Morales et al., (submitted)</em>).</p> <p>----------------------------------------------------------------------------------------</p> <p>Geographical coverage: Global Ocean</p> <p>Grid and horizontal spatial resolution: Evenly spaced 0.25º grid</p> <p>Vertical levels: 50 levels from 0 to 5000 meters depth</p> <p>Temporal resolution: Annual (1993-2019)</p> <p>-----------------------------------------------------------------------------------------</p> <p>Variables:</p> <p>lon (2D): Longitude</p> <p>lat (2D): Latitude</p> <p>verlev(1D): Vertical level</p> <p>time (1D): Year</p> <p>w_oliv3 (4D): Beta-plane geostrophic vertical velocities</p> <p>flag_time_var (3D): Flag based on correlation coeffcient between geostrophic and total vertical velocties from OGCM</p> <p>flag_time_mean (3D): flag based on relative error between geostrophic and total vertical velocties from OGCM</p>
Spectral analysis for modal parameters linear estimate - Evaluation sets
Open the record for dataset details and reuse information.
Streamlining Linear Free Energy Relationships of Proteins through Dimensionality Analysis and Linear Modeling
<p><span>This dataset and accompanying R code support the manuscript titled "Streamlining Linear Free Energy Relationships of Proteins through Dimensionality Analysis and Linear Modeling," submitted to the Journal of Chemical Information and Modeling. The dataset primarily contains tables detailing the various chemicals, dependent, and independent variables used to develop two-parameter linear models for predicting muscle protein-water and serum albumin-water partition coefficients in this study. Additionally, it includes information on both observed and predicted values of these partition coefficients by newly developed models. The R code comprises scripts used for generating figures and results presented in the manuscript.</span></p> <p><span>The R code comprises scripts used for generating figures and results presented in the manuscript.</span></p> <p><span>These files are currently under restricted access for peer review purposes and will be made publicly available upon acceptance of the manuscript.</span></p>
LinearCoFold and LinearCoPartition: Linear-Time Algorithms for Secondary Structure Prediction of Interacting RNA molecules
<p>LinearCoFold and LinearCoPartition</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.