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Supplementary material 4 from: Gladstone NS, Niemiller ML, Pieper EB, Dooley KE, McKinney ML (2019) Morphometrics and phylogeography of the cave-obligate land snail Helicodiscus barri (Gastropoda, Stylommatophora, Helicodiscidae). Subterranean Biology 30: 1-32. https://doi.org/10.3897/subtbiol.30.35321
: Data type: multimedia
Figure 7 from: Gladstone NS, Niemiller ML, Pieper EB, Dooley KE, McKinney ML (2019) Morphometrics and phylogeography of the cave-obligate land snail Helicodiscus barri (Gastropoda, Stylommatophora, Helicodiscidae). Subterranean Biology 30: 1-32. https://doi.org/10.3897/subtbiol.30.35321
Figure 7 Geographic distribution of MOTUs generated from the mPTP delimitation method in relation to karst adapted from Weary and Doctor (2014). Triangles represent cave populations. The numbers associated with each unique color corresponds to the associated mPTP MOTUs found in Table 3.
Figure 6 from: Gladstone NS, Niemiller ML, Pieper EB, Dooley KE, McKinney ML (2019) Morphometrics and phylogeography of the cave-obligate land snail Helicodiscus barri (Gastropoda, Stylommatophora, Helicodiscidae). Subterranean Biology 30: 1-32. https://doi.org/10.3897/subtbiol.30.35321
Figure 6 PCA results from both geometric morphometric (left) and traditional morphometric (right) analyses. A, B Total morphometric dataset (n=65) grouped by physiographic province. C, D Morphometric dataset with complimentary molecular data (n=39) grouped by MOTUs from the mPTP analysis.
Figure 3 from: Gladstone NS, Niemiller ML, Pieper EB, Dooley KE, McKinney ML (2019) Morphometrics and phylogeography of the cave-obligate land snail Helicodiscus barri (Gastropoda, Stylommatophora, Helicodiscidae). Subterranean Biology 30: 1-32. https://doi.org/10.3897/subtbiol.30.35321
Figure 3 Haplotype network generated using the NeighborNet network method with uncorrected p-distances with the CO1 dataset. Species delimitation results are depicted using major color groups for the mPTP results, and subcolor groups for the ABGD results.
Figure 2 from: Bernardi LFO, Prous X, Ribeiro MS, Mascarenhas J, Genelhú SMC, Simões MH, Bezerra T (2019) First record of albinism for the doglike bat, Peropteryx kappleri Peters, 1867 (Chiroptera, Emballonuridae). Subterranean Biology 30: 33-40. https://doi.org/10.3897/subtbiol.30.34223
Figure 2 Albino specimens of Peropteryx observed in caves of Floresta Nacional de Carajás. A–C male specimen of PeropteryxkappleriD juvenile specimen of Peropteryxkappleri.
Figure 1 from: Bernardi LFO, Prous X, Ribeiro MS, Mascarenhas J, Genelhú SMC, Simões MH, Bezerra T (2019) First record of albinism for the doglike bat, Peropteryx kappleri Peters, 1867 (Chiroptera, Emballonuridae). Subterranean Biology 30: 33-40. https://doi.org/10.3897/subtbiol.30.34223
Figure 1 Location of the caves where the specimens of Peropteryxklaperi were observed in the municipalities of Parauapebas (cavern PESE–0004) and Canaã dos Carajas (cavern S11D–0007), in southeastern Pará, Brazil.
Figure 5 from: Gladstone NS, Niemiller ML, Pieper EB, Dooley KE, McKinney ML (2019) Morphometrics and phylogeography of the cave-obligate land snail Helicodiscus barri (Gastropoda, Stylommatophora, Helicodiscidae). Subterranean Biology 30: 1-32. https://doi.org/10.3897/subtbiol.30.35321
Figure 5 Phylogenetic trees of the concatenated mtDNA (CO1 + 16S; 1316 bp) and the full mtDNA + nDNA (CO1 + 16S + 28S + H3; 3040 bp) datasets. Posterior probabilities generated from the analyses are shown for each clade with the top numbers. Confidence values given from the bootstrapped ML method are shown for each clade with the bottom numbers. The 'x' symbols indicate varying topology between the BI and ML analyses. ML trees are reported in the Appendix for cross-reference. Species delimitation results are depicted using major color groups for the mPTP results, and subcolor groups for the ABGD results.
Figure 2 from: Gladstone NS, Niemiller ML, Pieper EB, Dooley KE, McKinney ML (2019) Morphometrics and phylogeography of the cave-obligate land snail Helicodiscus barri (Gastropoda, Stylommatophora, Helicodiscidae). Subterranean Biology 30: 1-32. https://doi.org/10.3897/subtbiol.30.35321
Figure 2 A Landmark scheme for geomorphometric analyses. Red circles represented landmarks (LM), blue circles represent semi-landmarks (SLM). B Shell measurements utilized for the traditional morphometric (TM) analyses.
Figure 1 from: Gladstone NS, Niemiller ML, Pieper EB, Dooley KE, McKinney ML (2019) Morphometrics and phylogeography of the cave-obligate land snail Helicodiscus barri (Gastropoda, Stylommatophora, Helicodiscidae). Subterranean Biology 30: 1-32. https://doi.org/10.3897/subtbiol.30.35321
Figure 1 Geographic distribution of Helicodiscusbarri from this study in relation to karst adapted from Weary and Doctor (2014). Triangles represent cave populations.
Figure 4 from: Gladstone NS, Niemiller ML, Pieper EB, Dooley KE, McKinney ML (2019) Morphometrics and phylogeography of the cave-obligate land snail Helicodiscus barri (Gastropoda, Stylommatophora, Helicodiscidae). Subterranean Biology 30: 1-32. https://doi.org/10.3897/subtbiol.30.35321
Figure 4 Phylogenetic tree of the CO1 dataset (808 bp) using the BI methodology. Posterior probabilities generated from the analysis are shown for each clade with the top numbers. Confidence values given from the bootstrapped ML method are shown for each clade with the bottom numbers. The 'x' symbols indicate varying topology between the BI and ML analyses. ML trees are reported in the Appendix for cross-reference. Species delimitation results are depicted using major color groups for the mPTP results, and subcolor groups for the ABGD results.
Figure 4 from: Turcios-Casco MA, Mazier DIO, Orellana JAS, Ávila-Palma HD, Trejo EJO (2019) Two caves in western Honduras are important for bat conservation: first checklist of bats in Santa Bárbara. Subterranean Biology 30: 41-55. https://doi.org/10.3897/subtbiol.30.35420
Figure 4 Caves of El Peñon are located riverside of Río Ulúa. This agglomeration of 7 caves is located riverside of the Río Ulúa. During the surveys we found an owl (Strigidae) coming out of the cave when the activity of the bats (18:00) started, and also, we found remains of the food belonging to a presumably Chironectesminimus (Didelphidae), that use rocks of these caves to eat fishes. The photos were taken by Hefer Ávila.
Figure 6 from: Turcios-Casco MA, Mazier DIO, Orellana JAS, Ávila-Palma HD, Trejo EJO (2019) Two caves in western Honduras are important for bat conservation: first checklist of bats in Santa Bárbara. Subterranean Biology 30: 41-55. https://doi.org/10.3897/subtbiol.30.35420
Figure 6 An adult female of Glossophagasoricina returning to the cave of Monte Grueso after the pollination of certain species of plants. During these surveys, we found trees with opened flowers of Crescentiaalata (Bignoniaceae). The photo was taken by Hefer Ávila.
Figure 7 from: Turcios-Casco MA, Mazier DIO, Orellana JAS, Ávila-Palma HD, Trejo EJO (2019) Two caves in western Honduras are important for bat conservation: first checklist of bats in Santa Bárbara. Subterranean Biology 30: 41-55. https://doi.org/10.3897/subtbiol.30.35420
Figure 7 Adult female of Diphyllaecaudata captured in the cave of Monte Grueso when leaving the cave for searching food. The shelters of this unstudied species in Honduras in Monte Grueso could represent an important site for their conservation. The photo was taken by Hefer Ávila.
Figure 3 from: Turcios-Casco MA, Mazier DIO, Orellana JAS, Ávila-Palma HD, Trejo EJO (2019) Two caves in western Honduras are important for bat conservation: first checklist of bats in Santa Bárbara. Subterranean Biology 30: 41-55. https://doi.org/10.3897/subtbiol.30.35420
Figure 3 A the main entrance of the cave of Monte Grueso is a climb of approximately 5 meters drop. The inside of the cave is divided into tree branches. The photo was taken by Hefer Ávila B main branch of the cave, which is often used by the bats whenever they entered or exited the cave. Notice the guano in the floor of the cave of hematophagous bats (D.ecaudata and D.rotundus). The photo was taken by Manfredo Turcios Padgett.
Figure 2 from: Turcios-Casco MA, Mazier DIO, Orellana JAS, Ávila-Palma HD, Trejo EJO (2019) Two caves in western Honduras are important for bat conservation: first checklist of bats in Santa Bárbara. Subterranean Biology 30: 41-55. https://doi.org/10.3897/subtbiol.30.35420
Figure 2 Species richness of bats in Ceguaca, Santa Bárbara based on the abundance of individuals captured during 2015 and 2016. Based on the estimator indexes, between 35.05 and 58.29% of bat species are still unrecorded. None of these accumulation curves reached an asymptote, which reflects that more sampling effort is needed in the area.
Figure 5 from: Turcios-Casco MA, Mazier DIO, Orellana JAS, Ávila-Palma HD, Trejo EJO (2019) Two caves in western Honduras are important for bat conservation: first checklist of bats in Santa Bárbara. Subterranean Biology 30: 41-55. https://doi.org/10.3897/subtbiol.30.35420
Figure 5 Pregnant female of Pteronotuspersonatus in the Cave of El Peñón during the survey of May 8, 2016. The photo was taken by Hefer Ávila.
Figure 1 from: Turcios-Casco MA, Mazier DIO, Orellana JAS, Ávila-Palma HD, Trejo EJO (2019) Two caves in western Honduras are important for bat conservation: first checklist of bats in Santa Bárbara. Subterranean Biology 30: 41-55. https://doi.org/10.3897/subtbiol.30.35420
Figure 1 Study sites at Ceguaca, Santa Bárbara in western Honduras. Note that near the Tropical Dry Forest of Ceguaca there are Humid Subtropical Forest. Also, the cave of El Peñon is located near Río Ulúa, one of the longest rivers in Honduras The life zones are based on Holdridge (1987). Map organized in QGIS software, version 2.18, Author: Diego Ordoñez.
Figure 7 from: Liu WX, Wynne JJ (2019) Cave millipede diversity with the description of six new species from Guangxi, China. Subterranean Biology 30: 57-94. https://doi.org/10.3897/subtbiol.30.35559
Figure 7 Hyleoglomerisxuxiakei sp. nov., holotype. A–C Habitus, dorsal, lateral and ventral views, respectively.
Figure 8 from: Liu WX, Wynne JJ (2019) Cave millipede diversity with the description of six new species from Guangxi, China. Subterranean Biology 30: 57-94. https://doi.org/10.3897/subtbiol.30.35559
Figure 8 Hyleoglomerisxuxiakei sp. nov., holotype. A Leg 17, anterior view B leg 18; anterior view C right half of telopods, posterior view D right half of telopods, anterior views.
Figure 3 from: Liu WX, Wynne JJ (2019) Cave millipede diversity with the description of six new species from Guangxi, China. Subterranean Biology 30: 57-94. https://doi.org/10.3897/subtbiol.30.35559
Figure 3 AHyleoglomerisrukouqu sp. nov. from Shangshuiyan Cave BHyleoglomerisxuxiakei sp. nov. from Guanshan No. 4 Cave CHylomusyuani sp. nov. from Liangfeng Cave DEutrichodesmusjianjia sp. nov. from Guanshan No. 4 Cave.
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Annotated Behaviour and Observability Dataset (ABODe)
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