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975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Spatial Transcriptomic profiling of day2 wounds and intact tissues of Hgfac WT and KO mice
GEO Series GSE235742. Mus musculus. 3 samples. Type: Other.
Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia
GEO Series GSE294669. Homo sapiens. 13 samples. Type: Other.
Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer
GEO Series GSE274557. Homo sapiens. 57 samples. Type: Other.
Spatially-resolved transcriptomics reveal macrophage heterogeneity and prognostic significance in diffuse large B-cell lymphoma
GEO Series GSE232853. Homo sapiens. 592 samples. Type: Expression profiling by high throughput sequencing.
Cellular profiling of a recently-evolved social behavior [spatial transcriptomics]
GEO Series GSE217615. Mchenga conophoros. 13 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes
GEO Series GSE213688. Homo sapiens. 15 samples. Type: Other.
MacroH2A restricts melanoma progression via inhibition of chemokine expression in cancer-associated fibroblasts [spatial transcriptomics]
GEO Series GSE229532. Mus musculus. 2 samples. Type: Other; Expression profiling by high throughput sequencing.
4D marmoset brain map reveals MRI and molecular signatures for onset of multiple sclerosis–like lesions [spatial transcriptomes]
GEO Series GSE266655. Callithrix jacchus. 16 samples. Type: Other.
Combined single-cell and spatial transcriptomics reveal the precise cellular states of postnatal cerebellar granule cells and connection with medulloblastoma
GEO Series GSE156633. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
Parallel spatial transcriptomics, single-cell and bulk RNA-Seq analysis of the human embryonic HSC niche, the dorsal aorta
GEO Series GSE151877. Homo sapiens. 44 samples. Type: Expression profiling by high throughput sequencing.
Identification and mapping of human lymph node stromal cell subsets by combining single-cell RNA sequencing with spatial transcriptomics.
GEO Series GSE261747. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
SDePER: a hybrid machine learning and regression method for cell-type deconvolution of spatial barcoding-based transcriptomic data
GEO Series GSE231385. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Trajectory modeling of first trimester placenta highlight differences between cytotrophoblast progenitors and trophoblast stem cells [Spatial Transcriptomics]
GEO Series GSE270173. Homo sapiens. 29 samples. Type: Other.
Spatial transcriptomics landscape of non-communicable inflammatory skin diseases
GEO Series GSE206391. Homo sapiens. 74 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma
GEO Series GSE206245. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing; Other.
Spatial transcriptomic analysis of Nf1+/- mouse brain
GEO Series GSE263303. Mus musculus. 4 samples. Type: Other.
mousemodel_Heptablastoma spatial transcriptomics
GEO Series GSE195575. Mus musculus. 10 samples. Type: Other.
Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis
GEO Series GSE276945. Homo sapiens. 46 samples. Type: Other.
Atf3 controls transitioning in female mitochondrial cardiomyopathy as identified by single-cell transcriptomics [Spatial Transcriptomics]
GEO Series GSE282635. Homo sapiens. 1 samples. Type: Other.
Pubching spatial transcriptomics of MDA-MB-231 xenografts
GEO Series GSE184720. Homo sapiens. 137 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.