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727 results for “Molecular taxonomy”
Figure 3 from: Teruya S, Setiamarga DHE, Nakano T, Sasaki T (2022) Molecular phylogeny of Nipponacmea (Patellogastropoda, Lottiidae) from Japan: a re-evaluation of species taxonomy and morphological diagnosis. ZooKeys 1087: 163-198. https://doi.org/10.3897/zookeys.1087.78193
Figure 3 Shell morphology and color pattern of Nipponacmea gloriosa and four species of Clade A A–CN. gloriosa, RM31869, Ibusuki, Kagoshima (41) DN. gloriosa, RM31860, Tateyama, Chiba (13) EN. gloriosa, RM31862, Manazuru, Kanagawa (14) F–HN. fuscoviridis, RM31858, Kimotsuki, Kagoshima (42) IN. fuscoviridis, RM31846, Nikaho, Akita (10) JN. fuscoviridis, RM31859, Kimotsuki, Kagoshima (42) K–MN. boninensis, RM31817, Chichijima Is., Ogasawara (43) NN. boninensis, RM31815, Chichijima Is., Ogasawara (43) ON. boninensis, RM31816, Chichijima Is., Ogasawara (43) P–RN. schrenckii, RM31906, Kazamaura, Aomori (6) SN. schrenckii, RM31908, Kazamaura, Aomori (6) TN. schrenckii, RM31916, Nagatamachi, Nagasaki (35) U–WN. concinna, RM31820, Ofunato, Iwate (11) XN. concinna, RM31824, Mihamacho, Wakayama (21) YN. concinna, RM31828, Suo-Oshima, Yamaguchi (30). Scale bars: 5 mm.
Figure 2 from: Teruya S, Setiamarga DHE, Nakano T, Sasaki T (2022) Molecular phylogeny of Nipponacmea (Patellogastropoda, Lottiidae) from Japan: a re-evaluation of species taxonomy and morphological diagnosis. ZooKeys 1087: 163-198. https://doi.org/10.3897/zookeys.1087.78193
Figure 2 Maximum likelihood phylogenetic tree generated from 1809 bp constructed from the concatenated COI, Cytb, 12S rRNA, and 16S rRNA gene sequences from Nipponacmea representatives. Numbers above or below the branches are ML bootstrap values and Bayesian posterior probabilities, respectively. See Table 2 for sample numbers.
Figure 4 from: Teruya S, Setiamarga DHE, Nakano T, Sasaki T (2022) Molecular phylogeny of Nipponacmea (Patellogastropoda, Lottiidae) from Japan: a re-evaluation of species taxonomy and morphological diagnosis. ZooKeys 1087: 163-198. https://doi.org/10.3897/zookeys.1087.78193
Figure 4 Shell morphology and color pattern of N. radula and three species of clade B A–CN. radula, RM31904, Omura, Nagasaki (34) DN. radula, RM31902, Omura, Nagasaki (34) EN. radula, RM31899, Nagato, Yamaguchi (31) F–HN. nigrans, RM31892, Nishiku, Fukuoka (32) IN. nigrans, RM31888, Kada, Wakayama (22) JN. nigrans, RM31895, Higashisonogi, Nagasaki (33) K–MN. nigrans, RM31887, Minamiizu, Shizuoka (15) NN. nigrans, RM31886, Minamiizu, Shizuoka (15) ON. nigrans, RM31897, Higashisonogi, Nagasaki (33) P–RN. habei, RM31874, Ishinomaki, Miyagi (12) SN. habei, RM31875, Tateyama, Chiba (13) TN. habei, RM31873, Usujiri, Hokkaido (5) U–WN. teramachii, RM31930, Nishiku, Fukuoka (32) XN. teramachii, RM31925, Sanuki, Kagawa (28) YN. teramachii, RM31922, Ainancho, Ehime (24). Scale bars: 5 mm.
Supplementary material 1 from: Rudoy A, Zhu C-D, Ferrari RR, Zhang Y-Z (2022) Integrative taxonomy based on morphometric and molecular data supports recognition of the three cryptic species within the Encyrtus sasakii complex (Hymenoptera, Encyrtidae). Journal of Hymenoptera Research 90: 129-152. https://doi.org/10.3897/jhr.90.75807
Tables and figures
Fig. 25 in Morphological and molecular evidence refute a broad circumscription for Pultenaea glabra (Fabaceae: Mirbelieae), with implications for taxonomy, biogeography, and conservation
Fig. 25. Pultenaea aculeata (= P. sp. Olinda (R. Coveny 6166)) shoots developing post-fire.
◂Fig. 3 Historically described phenotypical variations and yet undiscovered deviations in the plate pattern of P. volzii. b–c, f, i, l–m Light microscopy, a, d–e, g–h, k scanning electron microscopy. a–f Newly identified deviations a–b plate 4′′ pentagonal in strains a GeoM*793; b GeoM*788; c plate 2a split (strain GeoK*024); d plates 2′′ and 3′′ fused (strain GeoM*866); e plates 1′′′ and 1′′′′ fused (strain GeoM*788); f plates 1a and 3′ fused (strain GeoM*788). g–m Historic infraspecific taxa; g P. guestrowiense forma lineatum (strain GeoM*866); h P. guestrowiense forma compressum (strain GeoM*866); i P. guestrowiense subvar. originale (strain GeoK*024); k P. volzii var. cinctiforme (strain GeoM*793); l P. volzii var. simplex (strain GeoM*789); m P. volzii forma complexum (strain GeoM*793). Abbreviations: n′: apical plate, n′′: precingular plate, n′′′: postcingular plate, n′′′′: antapical plate, na: anterior intercalary plate, nC: cingular plate, split or fused plates are indicated by asterisks. Scale bar= 10 µm. U A= 15 kV in Morphological and molecular variability of Peridinium volzii Lemmerm. (Peridiniaceae, Dinophyceae) and its relevance for infraspecific taxonomy
◂Fig. 3 Historically described phenotypical variations and yet undiscovered deviations in the plate pattern of P. volzii. b–c, f, i, l–m Light microscopy, a, d–e, g–h, k scanning electron microscopy. a–f Newly identified deviations a–b plate 4′′ pentagonal in strains a GeoM*793; b GeoM*788; c plate 2a split (strain GeoK*024); d plates 2′′ and 3′′ fused (strain GeoM*866); e plates 1′′′ and 1′′′′ fused (strain GeoM*788); f plates 1a and 3′ fused (strain GeoM*788). g–m Historic infraspecific taxa; g P. guestrowiense forma lineatum (strain GeoM*866); h P. guestrowiense forma compressum (strain GeoM*866); i P. guestrowiense subvar. originale (strain GeoK*024); k P. volzii var. cinctiforme (strain GeoM*793); l P. volzii var. simplex (strain GeoM*789); m P. volzii forma complexum (strain GeoM*793). Abbreviations: n′: apical plate, n′′: precingular plate, n′′′: postcingular plate, n′′′′: antapical plate, na: anterior intercalary plate, nC: cingular plate, split or fused plates are indicated by asterisks. Scale bar= 10 µm. U A= 15 kV
Fig. 6 in A dated molecular perspective of eucalypt taxonomy, evolution and diversification
Fig. 6. Bayesian analyses of macroevolutionary mixtures (BAMM) using the maximum likelihood (ML)
Fig. 1 in Molecular phylogeny provides new insights on the taxonomy and composition of Lyperosomum Looss, 1899 (Digenea, Dicrocoeliidae) and related genera
Fig. 1. Phylogenetic interrelationships of Dicrocoeliidae based on Bayesian analysis of partial sequences of the 28 S rDNA gene. Numbers above internodes indicate posterior probabilities greater than 70%. The scale bar indicates the number of substitutions per site. New sequences obtained in this study are in bold. The symbol (*) marks migrating bird. Additional data regarding the sequences are presented in Table 1.
Fig. 2 in Molecular phylogeny provides new insights on the taxonomy and composition of Lyperosomum Looss, 1899 (Digenea, Dicrocoeliidae) and related genera
Fig. 2. Bayesian analysis of the cytochrome c oxidase subunit 1 (cox1) gene combined with nicotinamide adenine dinucleotide dehydrogenase subunit 1 gene (nad1) of Lyperosomum spp. constructed using MrBayes. Numbers below internodes indicate posterior probabilities greater than 70%. All sequences, except for D. dendriticum, have been obtained in this study. Additional data regarding the sequences are presented in Table 1.
FIGURE 7 in Contributions to the taxonomy of the Irano-Turanian genus Rhabdosciadium (Apiaceae): Nomenclatural notes, carpology, molecular phylogeny and the description of a new species from Bitlis (Turkey)
FIGURE 7. Umbel of Rhabdosciadium hizanense (from the holotype, M. Fırat 32618).
FIGURE 6 in Contributions to the taxonomy of the Irano-Turanian genus Rhabdosciadium (Apiaceae): Nomenclatural notes, carpology, molecular phylogeny and the description of a new species from Bitlis (Turkey)
FIGURE 6. Caudex of Rhabdosciadium hizanense (from the holotype, M. Fırat 32618).
FIGURE 5 in Contributions to the taxonomy of the Irano-Turanian genus Rhabdosciadium (Apiaceae): Nomenclatural notes, carpology, molecular phylogeny and the description of a new species from Bitlis (Turkey)
FIGURE 5. Habit of Rhabdosciadium hizanense (from the holotype, M. Fırat 32618).
FIGURE 4 in Contributions to the taxonomy of the Irano-Turanian genus Rhabdosciadium (Apiaceae): Nomenclatural notes, carpology, molecular phylogeny and the description of a new species from Bitlis (Turkey)
FIGURE 4. Rhabdosciadium hizanense in habitat (from the holotype, M. Fırat 32618).
FIGURE 10 in Contributions to the taxonomy of the Irano-Turanian genus Rhabdosciadium (Apiaceae): Nomenclatural notes, carpology, molecular phylogeny and the description of a new species from Bitlis (Turkey)
FIGURE 10. Habitus of Rhabdosciadium anatolyi (from the epitype, M. Fırat 30400).
FIGURE 11 in Contributions to the taxonomy of the Irano-Turanian genus Rhabdosciadium (Apiaceae): Nomenclatural notes, carpology, molecular phylogeny and the description of a new species from Bitlis (Turkey)
FIGURE 11. Caudex of Rhabdosciadium anatolyi (from the epitype, M. Fırat 30400).
Table 5 in Taxonomy and molecular phylogenetic position of new species and new records of Coelosphaeridae (Demospongiae: Poecilosclerida) from the Mexican Pacific
<p><b>Table 5.</b> Comparative data for the dimensions of the spicules (in µm) of <i>L. (W.) hawaiiana</i>. Shass length × width; head diameter are given for megascleres and total length for arcuate isochelae and sigmas. Values in parentheses are means</p><table><tbody><tr><th><b><i>L. (W.) hawaiiana</i> material examined</b></th><th><b>Tylotes</b></th><th><b>Oxeas</b></th><th><b>Arcuate isochelae</b></th><th><b>Sigmas</b></th></tr></tbody><tbody><tr><th>MBR-11506</th><td>200–(212.5)–225 × 2.5–(3)–5</td><td>185–(217.3)–250 × 2.5–(6.3)–7.5</td><td>10–(25.3)–35</td><td>10–(14.6)–25</td></tr><tr><th>LACM-1954</th><td>185–(200)–212.5 × 2.5–(3)–5</td><td>175–(191.8)–205 × 2.5–(6.8)–10</td><td>12.5–(21.6)–30</td><td>10–(11.1)–17.5</td></tr><tr><th>LEB-ICML-UNAM-147</th><td>165–(191.3)–215 × 2.5–(2.7)–5</td><td>185–(208.3)–225 × 2.5–(4.1)–10; 4.5–(6)–8</td><td>15–(25.7)–35</td><td>12.5–(14.6)–17</td></tr><tr><th>LEB-ICML-UNAM-396</th><td>200–(213.5)–235 × 2.5–(2.8)–3.9</td><td>128–(175)–226 × 2.5–(3.4)–5.2; 5–(6.3)–7.5</td><td>15.5–(21.8)–33</td><td>12.9–(17.5)–23</td></tr><tr><th>LEB-ICML-UNAM-1618</th><td>170–(195.6)–220 × 2.5–(4.2)–6.3; 5–(6.5)–7.5</td><td>190–(209.5)–220 × 2.5–(5.2)–7.5</td><td>17.5–(26.7)–35</td><td>I: 12.5–(14.1)–15 II: 32.5–49 (<i>N</i> = 2)</td></tr><tr><th>LEB-ICML-UNAM-1631</th><td>190–(207.7)–220 × 2.5–(3.05)–5</td><td>190–(208.75)–225 × 2.5–(4.375)–7.5</td><td>15–(20.5)–30</td><td>12.5–(14.09)–15</td></tr><tr><th>LEB-ICML-UNAM-1784</th><td>200–(213.5)–233.7 × 2.5–(2.8)–3.9</td><td>128–(166)–220 × 2.5–(3.4)–5.2</td><td>15.5–(21.8)–35</td><td>12.9–(17.5)–25</td></tr><tr><th>LEB-ICML-UNAM-1793</th><td>181–(198)–205 × 1.3–(3)–3.8</td><td>168–(191)–218 × 2.5–(5)–7.7</td><td>18–(25.5)–35</td><td>12.9–(15.8)–18 II: 32.5 (<i>N</i> = 1)</td></tr><tr><th>LEB-ICML-UNAM-1806</th><td>205–(208)–218 × 2.5–(2.8)–3.8</td><td>181–(191)–205 × 2.5–(4.1)–5</td><td>18–(19.1)–21.5</td><td>10–(12.5)–15</td></tr><tr><th>LEB-ICML-UNAM-1809</th><td>174–(198.5)–213 × 1.3–(2.5)–3.8</td><td>171–(190)–207 × 5–(6.7)–7.7</td><td>18–(26)–33.7</td><td>12.5–(15)–18</td></tr><tr><th>LEB-ICML-UNAM-1810</th><td>181–(195.5)–223 × 2.5–(3)–3.3</td><td>161–(175)–192 × 2.5–(5.3)–7.7</td><td>15–(25.3)–31</td><td>10–(12.9)–15</td></tr><tr><th>LEB-ICML-UNAM-1811</th><td>181–(201.1)–210 × 1.5–(4.2)–5</td><td>145–(188.9)–207.7 × 1.3–(4.4)–7.7</td><td>15.5–(27.5)–33.7</td><td>12.5–(15.5)–18</td></tr><tr><th>LEB-ICML-UNAM-1845</th><td>177.5–(201.8)–212.5 × 2.5–(3.4)–7.5</td><td>190–(207)–217.5 × 5–(7.5)–10</td><td>17.5–(27.5)–32.5</td><td>12.5–(14.1)–15 II: 30–(33)–36.3 (<i>N</i> = 4)</td></tr><tr><th>LEB-ICML-UNAM-1884</th><td>180–(198.8)–210 × 2.5–(3.6)–5</td><td>150–(191.2)–225 × 2.5–(5.6)–7.5</td><td>17.5–(27.6)–35</td><td>12.5–(14.3)–20</td></tr><tr><th>LEB-ICML-UNAM-1938</th></tr><tr><th>LEB-ICML-UNAM-2441</th><td>200–(213.5)–232.5 × 3.8–(4.9)–6.3; 5–(7)–8</td><td>155–(205.3)–230 × 6–(7.5)–10</td><td>17.5–(26.2)_37.5</td><td>I: 15–(15.8)–18 II: 37.5–40 (<i>N</i> = 2)</td></tr><tr><th>LEB-ICML-UNAM-2447</th><td>175–(187.8)–193 × 3–(3.6)–5; 3.8–(5.2)–7.5</td><td>132.5–(178.3)–210.5 × 2.5–(5.4)–8.8</td><td>15–(27.3)–35</td><td>I: 10–(12.8)–17.5 II: 35 (<i>N</i> = 1)</td></tr><tr><th>LEB-ICML-UNAM-3055</th><td>185–(195)–215 × 2.5–(4.3)–4; 5–(6.2)–7.5</td><td>165–(190)–212.5 × 2.5–(4.3)–5; (6.2)–7.5</td><td>15–(28.5)–37.5</td><td>I: 10–(14.4)–16.3 II: -</td></tr></tbody></table>
Table 3 in Taxonomy and molecular phylogenetic position of new species and new records of Coelosphaeridae (Demospongiae: Poecilosclerida) from the Mexican Pacific
<p><b>Table 3.</b> Comparative data for the dimensions of the spicules (in µm) of <b><i>Lissodendoryx (Anomodoryx) incrustans</i> sp. nov.</b>, shass length × width are given for megascleres and total length for arcuate isochelae and sigmas. Values in parentheses are means</p><table><tbody><tr><th><b>Material examined</b></th><th><b>Tylotes</b></th><th><b>Arcuate isochelae</b></th><th><b>Sigmas</b></th></tr><tr><th><b>Holotype</b></th></tr></tbody><tbody><tr><th>LEB-ICML-UNAM-449</th><td>150–(168.1)–200 × 2.5–(2.8)–5</td><td>12.5–(15.9)–20</td><td>15–(32.9)–40</td></tr><tr><th><b>Paratype</b></th></tr><tr><th>LEB-ICML-UNAM-1393</th><td>160–(213.3)–230 × 2.5–(2.5)–2.5</td><td>15–(16.9)–20</td><td>22.5–(35.4)–40</td></tr></tbody></table>
FIGURE 8 in Integrative taxonomy base on morphology and molecular phylogeny with description of a new genus, Progoniogryllus gen. nov. and two new species (Orthoptera: Grylloidea: Gryllidae; Gryllinae)
FIGURE 8. Genitalia of P. directus sp. nov. A. dorsal viewed; B. lateral viewed; C. ventral viewed.
FIGURE 6 in Integrative taxonomy base on morphology and molecular phylogeny with description of a new genus, Progoniogryllus gen. nov. and two new species (Orthoptera: Grylloidea: Gryllidae; Gryllinae)
FIGURE 6. Genitalia of P. rotundus sp. nov. A. dorsal viewed; B. lateral viewed; C. ventral viewed.
FIGURE 5 in Integrative taxonomy base on morphology and molecular phylogeny with description of a new genus, Progoniogryllus gen. nov. and two new species (Orthoptera: Grylloidea: Gryllidae; Gryllinae)
FIGURE 5. Bodies of P. rotundus sp. nov. A. male; B. female. Scale bar: 10 mm
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.