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975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA
GEO Series GSE180682. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
Spatial organization shapes the turnover of a bacterial transcriptome
GEO Series GSE75818. Escherichia coli. 88 samples. Type: Expression profiling by high throughput sequencing.
Exploring kidney allograft rejection: A proof-of-concept study using spatial transcriptomics
GEO Series GSE245870. Homo sapiens. 4 samples. Type: Other.
Spatial transcriptome profiling by MERFISH reveals fetal liver hematopoietic stem cell niche architecture.
GEO Series GSE172129. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics reveals tanscriptional perturbations leading to uterine squamous metaplasia, atrophy, and infertility in a mouse model of RTHa
GEO Series GSE273927. blank sample; Mus musculus. 191 samples. Type: Other.
Paired single-cell and spatial transcriptional profiling reveals a central osteopontin macrophage response mediating tuberculous granuloma formation in humans and zebrafish [Spatial Transcriptomics]
GEO Series GSE296400. Homo sapiens. 4 samples. Type: Other.
Comparative multi-omic analysis reveals conserved and derived mechanisms of fin and limb regeneration [spatial transcriptomics]
GEO Series GSE315990. Polypterus senegalus. 4 samples. Type: Other.
Dissecting the immune suppressive human prostate tumor microenvironment via integrated single-cell and spatial transcriptomic analyses
GEO Series GSE181294. Homo sapiens. 51 samples. Type: Expression profiling by high throughput sequencing.
RNA proximity sequencing reveals properties of spatial transcriptome organization in the nucleus
GEO Series GSE129732. Homo sapiens. 6 samples. Type: Other; Expression profiling by high throughput sequencing.
Spatial transcriptomics of intraductal carcinoma of the prostate (IDCP)
GEO Series GSE262276. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing; Other.
Spatial transcriptomic characteristics of the aging human ovary
GEO Series GSE267315. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC [snRNA-Seq]
GEO Series GSE278689. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Spatial epigenome-transcriptome co-profiling of mammalian tissues [RNA-Seq]
GEO Series GSE205054. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Characterization of regeneration initiating cells during Xenopus laevis tail regeneration [spatial transcriptomics]
GEO Series GSE245313. Xenopus laevis. 3 samples. Type: Other.
Single-cell and spatial transcriptomics identify COL6A3 as a prognostic biomarker in undifferentiated pleomorphic sarcoma [scRNA-Seq]
GEO Series GSE281096. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
APOE modulates microglial immunometabolism in response to age, amyloid pathology, and inflammatory challenge [Spatial transcriptomics]
GEO Series GSE212323. Mus musculus. 6 samples. Type: Other.
Spatial transcriptomics for platinum-resistant high-grade serous ovarian carcinoma
GEO Series GSE274657. Homo sapiens. 4 samples. Type: Other.
Spatial transcriptomics reveal lineage complexity of gastric incomplete intestinal metaplasia and its association with gastric cancers [ATAC-Seq]
GEO Series GSE294729. Homo sapiens. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Neurodevelopmental hijacking of oligodendrocyte lineage programs drives glioblastoma infiltration [Spatial transcriptomics]
GEO Series GSE290724. Homo sapiens. 2 samples. Type: Other.
Spatial transcriptomics of Cutaneous and Systemic Lupus Erythematosus skin
GEO Series GSE182825. Homo sapiens. 41 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.