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Supplementary material 2 from: Hasegawa N, Hookabe N, Fujiwara Y, Jimi N, Kajihara H (2024) Supplemental re-description of a deep-sea ascidian, Fimbrora calsubia (Ascidiacea, Enterogona), with an inference of its phylogenetic position. Zoosystematics and Evolution 100(1): 129-140. https://doi.org/10.3897/zse.100.113132
Video 2. Grabbing the ascidian with the manipulator of Shinkai 6500
Figure 5 from: Hasegawa N, Hookabe N, Fujiwara Y, Jimi N, Kajihara H (2024) Supplemental re-description of a deep-sea ascidian, Fimbrora calsubia (Ascidiacea, Enterogona), with an inference of its phylogenetic position. Zoosystematics and Evolution 100(1): 129-140. https://doi.org/10.3897/zse.100.113132
Figure 5 Phylogenetic relationship of 28 ascidian species; a Maximum-Likelihood tree, based on a concatenated dataset consisting of 18S rRNA (1676 bp) and COI (1136 bp) genes. Bootstrap values and posterior probabilities are indicated if they are higher than 60% and 0.70, respectively. Macrophagous species are indicated with an asterisk (*).
Figure 4 from: Hasegawa N, Hookabe N, Fujiwara Y, Jimi N, Kajihara H (2024) Supplemental re-description of a deep-sea ascidian, Fimbrora calsubia (Ascidiacea, Enterogona), with an inference of its phylogenetic position. Zoosystematics and Evolution 100(1): 129-140. https://doi.org/10.3897/zse.100.113132
Figure 4 Fimbrora calsubia Monniot & Monniot, 1991a (JAMSTEC No. 111618), photographs of fixed specimen. A. Sinistero-posterior portion of body, viewed from outside, showing alimentary canal and reproductive system; B. Cross section of stomach, showing the prey crustacean (probably a copepod); arrows indicating stomach folds; C. Gonads; D. Magnification of the rectangle on C, showing an ovary containing multiple eggs.
Figure 3 from: Hasegawa N, Hookabe N, Fujiwara Y, Jimi N, Kajihara H (2024) Supplemental re-description of a deep-sea ascidian, Fimbrora calsubia (Ascidiacea, Enterogona), with an inference of its phylogenetic position. Zoosystematics and Evolution 100(1): 129-140. https://doi.org/10.3897/zse.100.113132
Figure 3 Fimbrora calsubia Monniot & Monniot, 1991a (JAMSTEC No. 111618). A. Drawing of dissected specimen, showing the shape of neural-gland aperture, peripharyngeal band and dorsal lamina; B. Photograph of dissected pharynx cut open from ventral side; C. Magnification of the rectangle on B, showing the arrangement of longitudinal vessels, transverse vessels, stigmata and secondary branchial papillae (indicated with arrows).
Figure 2 from: Hasegawa N, Hookabe N, Fujiwara Y, Jimi N, Kajihara H (2024) Supplemental re-description of a deep-sea ascidian, Fimbrora calsubia (Ascidiacea, Enterogona), with an inference of its phylogenetic position. Zoosystematics and Evolution 100(1): 129-140. https://doi.org/10.3897/zse.100.113132
Figure 2 Fimbrora calsubia Monniot & Monniot, 1991a, photographs showing external appearance of JAMSTEC No. 111618. A. The individual in situ (white arrow), attaching to a dead sponge (yellow arrowhead) along with a euplectellid glass sponge (yellow arrow); B. Left view in life; C. Inner surface of the oral siphon in fixed state; D. Enlarged view of atrial siphon in life.
Figure 1 from: Hasegawa N, Hookabe N, Fujiwara Y, Jimi N, Kajihara H (2024) Supplemental re-description of a deep-sea ascidian, Fimbrora calsubia (Ascidiacea, Enterogona), with an inference of its phylogenetic position. Zoosystematics and Evolution 100(1): 129-140. https://doi.org/10.3897/zse.100.113132
Figure 1 Maps showing the sampling site (red circle), south of Houei Seamount (of which the top is indicated with a red triangle). The images were generated by using GMT 6 (Wessel et al. 2019), based on grid data provided by the General Bathymetric Chart of the Oceans.
FIGURE 9 in Abyssal ascidians (Chordata, Tunicata) from the Weddell Sea, Antarctica, including a new Styela species and stomach content identifications
FIGURE 9. Asajirus indicus.
FIGURE 2 in Abyssal ascidians (Chordata, Tunicata) from the Weddell Sea, Antarctica, including a new Styela species and stomach content identifications
FIGURE 2. Protoholozoa pedunculata.
FIGURE 10. Polycarpa triruga. A, B in Additional records of bathyal ascidians (Tunicata) from the New Caledonia region
FIGURE 10. Polycarpa triruga. A, B, branchial tissue of two different specimens. Scale bars = 5mm.
FIGURE 9. Polycarpa triruga. A, internal organs. B in Additional records of bathyal ascidians (Tunicata) from the New Caledonia region
FIGURE 9. Polycarpa triruga. A, internal organs. B, tunic. Scale bars = 1cm. C, neural area.
FIGURE 17. Herdmania pennata. A in Additional records of bathyal ascidians (Tunicata) from the New Caledonia region
FIGURE 17. Herdmania pennata. A, body in its tunic; B, body ventrally opened. Scale bars = 1cm.
SPANBIOS expedition: 27/06/2021 to 29/07 2021 in Additional records of bathyal ascidians (Tunicata) from the New Caledonia region
SPANBIOS expedition: 27/06/2021 to 29/07 2021
MAP. Stations around New Caledonia: SPANBIOS in yellow squares; EXBODI in red spots. in Additional records of bathyal ascidians (Tunicata) from the New Caledonia region
MAP. Stations around New Caledonia: SPANBIOS in yellow squares; EXBODI in red spots.
FIGURE 39 in Polka-dotted treasures: Revising a clade of ascidian- and bivalve-associated shrimps (Caridea: Palaemonidae)
FIGURE 39 Tympanal organ on the second chelipeds of various ingroup members, and the veil figured in detail for every claw. SEM captures: A (C detail), Tympanicheles ornatus (Holthuis, 1952) (RMNH.CRUS.D.41491); B (D detail), Anchistus miersi (De Man, 1888) (RMNH.CRUS.D.58030). µCT model: E (F detail; rotated), Anchistus australis Bruce, 1977 (RMNH.CRUS.D.53540). White arrows indicate proximal and distal border of tympanal organ. Scale bars: A: 1 mm; B-F: 500 µm. PHOTOGRAPHS BY P. HELLEMAN, J. VAN DEN OEVER (A–D), & W. DE GIER (E–F)
FIGURE 34 in Polka-dotted treasures: Revising a clade of ascidian- and bivalve-associated shrimps (Caridea: Palaemonidae)
FIGURE 34 Polkamenes nobilii (Holthuis, 1952). A-C, E, H-L) ZMA.CRUS.D.102.828, ovigerous female, pocl. 5.8 mm; D) idem, pocl. 5.8 mm; F) male, pocl. 4.0 mm; G) male, pocl. 4.0 mm. A) habitus, lateral view; B) anterior appendages, dorsal view; C) idem, lateral view; D–G) rostrum, lateral view; H) telson, dorsal view; I) left first pereiopod chela, lateral view; J) right second pereiopod chela, lateral view; K) left third pereiopod dactylus, lateral view; L) left fifth pereiopod distal part dactylus and unguis, lateral view. Scale A = 4 mm; B, C = 2 mm; D-H, J = 1 mm; I = 0.4 mm; K, L = 0.1 mm. ARTWORK BY C.H.J.M. FRANSEN
FIGURE 33 in Polka-dotted treasures: Revising a clade of ascidian- and bivalve-associated shrimps (Caridea: Palaemonidae)
FIGURE 33 Polkamenes pycnodontae (Bruce, 1978). A) RMNH.CRUS.D.48261, from Hyotissa hyotis (L., 1758); B) RMNH.CRUS.D.54136, in Pteria penguin (Röding, 1798); C)RMNH.CRUS.D.54139, in P. penguin; D) RMNH.CRUS.D.57918, stn RAJ.14, in Lopha sp. PHOTOGRAPHS BY C.H.J.M. FRANSEN
FIGURE 35 in Polka-dotted treasures: Revising a clade of ascidian- and bivalve-associated shrimps (Caridea: Palaemonidae)
FIGURE 35 Polkamenes pycnodontae (Bruce, 1978). A–C, E, K) RMNH.CRUS.D.48262, ovigerous female, pocl. 3.3 mm; L) idem, non ovigerous female, pocl. 3.1 mm; M) idem, non ovigerous female, pocl. 3.3 mm; G, N–Q) idem, male, pocl. 2.1 mm; I) male, pocl. 2.2 mm; D, R, S) RMNH.CRUS.D.48261, ovigerous female, pocl. 3.9 mm; I) RMNH.CRUS.D.48263, male pocl. 2.8 mm; J) RMNH.CRUS.D.48266, male, pocl. 2.7 mm; H) idem, male, pocl. 2.5 mm; F) idem ovigerous female, pocl. 3.4 mm. A) habitus, lateral view; B) anterior appendages, dorsal view; C) idem, lateral view; D–J) rostrum, lateral view; K) tail fan, dorsal view; L, M) telson, dorsal view; N) thorax, ventral view; O) left first pereiopod, lateral view; P) left second pereiopod, ventral view; Q) idem, chela, medial view; R) left third pereiopod, lateral view; S) idem, dactylus. Scale A = 4 mm; B, C, K = 2 mm; D–J, L, M, N = 1 mm; O, P, R = 1 mm; Q = 0.4 Downloadedmm; S = from0.1Brill mm.. com 06/24/2024 12:38:05AM ARTWORK BY C.H.J.M. FRANSENvia Open Access. This is an open access article distributed under the terms of the CC-BY 4.0 license. https://creativecommons.org/licenses/by/4.0/
FIGURE 31 in Polka-dotted treasures: Revising a clade of ascidian- and bivalve-associated shrimps (Caridea: Palaemonidae)
FIGURE 31 Paranchistus armatus (H. Milne Edwards, 1837), RMNH.CRUS.D.46092, ovigerous female, pocl. 13.8 mm. A) left mandible, ventral view; B) right maxillula, ventral view; C) right maxilla, ventral view; D) right first maxilliped, ventral view. Scale A = 0.5 mm; B–D = 1.25 mm. ARTWORK BY C.H.J.M. FRANSEN
FIGURE 29 Neoanchistus nasalis Holthuis, 1981. A in Polka-dotted treasures: Revising a clade of ascidian- and bivalve-associated shrimps (Caridea: Palaemonidae)
FIGURE 29 Neoanchistus nasalis Holthuis, 1981. A) RMNH.CRUS.D.48724, non ovigerous female pocl. 4.0 mm; B–E) RMNH.CRUS.D.36608, ovigerus female, pocl. 14.3 mm. A) habitus, lateral view; B) left second pereiopod, ventral view; C) idem, chela, ovigerous female, pocl. 12.4 mm; D) idem, ovigerous female, pocl. 14.3 mm; D) left fifth pereiopod dactylus, lateral view. Scale A = 2 mm; B = 4 mm; C, D = 1 mm; E = 0.1 mm. ARTWORK BY W. DE GIER (A) AND C.H.J.M. FRANSEN (B–D Downloaded) from Brill.com 06/24/2024 12:38:05AM via Open Access. This is an open access article distributed under the terms of the CC-BY 4.0 license. https://creativecommons.org/licenses/by/4.0/
FIGURE 8 Anchistus demani Kemp, 1922, RMNH.CRUS.D.41457, female pocl. 4.1 in Polka-dotted treasures: Revising a clade of ascidian- and bivalve-associated shrimps (Caridea: Palaemonidae)
FIGURE 8 Anchistus demani Kemp, 1922, RMNH.CRUS.D.41457, female pocl. 4.1 mm. A) left maxilla, ventral view; B) left first maxilliped, ventral view. Scale = 0.5 mm. ARTWORK BY C.H.J.M. FRANSEN
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.