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699
datasets available to search
ShareScore release 0.9.0
Dataset results
699 results for “biofilm.”
CapP mediates the structural formation of biofilm-specific pili in the opportunistic human pathogen Bacillus cereus.
GEO Series GSE259377. Bacillus cereus. 8 samples. Type: Expression profiling by high throughput sequencing.
Escherichia coli colony biofilms: Interior vs. Exterior
GEO Series GSE18059. Escherichia coli; Escherichia coli K-12. 4 samples. Type: Expression profiling by array.
Bacterial single cell RNA-seq unveils cyclic-di-GMP as an antitoxin critical for antibiotic tolerance in biofilm [RNA-seq]
GEO Series GSE239503. Escherichia coli str. K-12 substr. MG1655. 1 samples. Type: Expression profiling by high throughput sequencing.
A mouse tumor biofilm model and its use for dissecting in vivo anti-bacterial and anti-biofilm activities of anti-pseudomonas drugs
GEO Series GSE55000. Pseudomonas aeruginosa. 12 samples. Type: Expression profiling by high throughput sequencing.
Differential Expression and Quantitative Analysis of H. congolense DSM 11287 Transcriptome in Biofilms
GEO Series GSE147244. Halanaerobium congolense. 13 samples. Type: Expression profiling by high throughput sequencing.
The whole genome transcription analysis reveals the regulatory network for Listeria monocytogenes biofilm formation is modified in the prfA deletion mutant
GEO Series GSE43052. Listeria monocytogenes EGD-e. 15 samples. Type: Expression profiling by array.
FabR regulates Salmonella biofilm formation via its direct target FabB
GEO Series GSE52881. Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica. 4 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by genome tiling array.
A microbiota-derived bile acid modulates biofilm formation by the probiotic strain Escherichia coli Nissle 1917
GEO Series GSE297446. Escherichia coli Nissle 1917. 36 samples. Type: Expression profiling by high throughput sequencing.
Topical, immunomodulatory epoxy-tiglianes induce biofilm disruption and healing in acute and chronic skin wounds [HEKa]
GEO Series GSE202794. Homo sapiens. 18 samples. Type: Expression profiling by array.
Comparing transcriptomes of wild-type, hyperfilamentous, and hypofilamentous biofilms in S. cerevisiae
GEO Series GSE115657. Saccharomyces cerevisiae. 21 samples. Type: Expression profiling by high throughput sequencing.
RtmR is a membrane-embedded RRM-family RNA-binding protein that regulates biofilm formation
GEO Series GSE301959. Aliivibrio fischeri. 2 samples. Type: Other.
Distinct gene expression profile of Xanthomonas retroflexus engaged in synergistic multispecies biofilm formation
GEO Series GSE80267. Stenotrophomonas rhizophila; Paenibacillus amylolyticus; Microbacterium oxydans; Xanthomonas retroflexus. 17 samples. Type: Expression profiling by high throughput sequencing.
Evaluation of Wound Biofilm in Acute and Chronic Wounds
ClinicalTrials.gov study NCT00764348. IPD Sharing: Not stated. Countries: 0. Publications: 0.
CD4+ T cell-innate immune crosstalk is critical during Staphylococcus aureus biofilm infection [RAG KO scRNA-seq]
GEO Series GSE264737. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Clostridioides difficile-mucus interactions encompass shifts in gene expression, metabolism, and biofilm formation.
GEO Series GSE254621. Clostridioides difficile R20291. 9 samples. Type: Expression profiling by high throughput sequencing.
Biofilm matrix regulation by Candida glabrata Zap1 under acidic conditions: transcriptomic and proteomic analyses
GEO Series GSE226915. Nakaseomyces glabratus. 6 samples. Type: Expression profiling by array.
Comparative transcriptional analysis of Staphylococcus epidermidis biofilm matrix variants in human platelet concentrates
GEO Series GSE154352. Staphylococcus epidermidis. 16 samples. Type: Expression profiling by high throughput sequencing.
Comparison of microbial communities between conventional MBR system and biofilm MBR system
GEO Series GSE135797. wastewater metagenome. 3 samples. Type: Other.
RNA seq data of Pseudomonas fragi 1793 biofilms formed on aerobically stored, chilled beef
GEO Series GSE164539. Pseudomonas fragi. 12 samples. Type: Expression profiling by high throughput sequencing.
Time resolved transcriptome of isolated biofilm cells compared with planktonic cells
GEO Series GSE115528. Bacillus cereus ATCC 14579. 14 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.