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882 results for “3d model”

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geo24/100

Comprehensive Characterization of 3D Models for Prostate Cancer Growth and Invasion in Laminin-rich Extracellular Matrix

GEO Series GSE19426. Homo sapiens. 54 samples. Type: Expression profiling by array.

openGEO-OpenDec 2010View details →
geo24/100

Ethanol exposure drives colon location-specific cell composition changes in a normal colon crypt 3D organoid model

GEO Series GSE150027. Homo sapiens. 68 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2020View details →
dryad24/100

Data from: From the cover: three-dimensional (3d) heparg spheroid model with physiologically relevant xenobiotic metabolism competence and hepatocyte functionality for liver toxicity screening.

Open the record for dataset details and reuse information.

publicJun 2017View details →
geo24/100

A 3D renal proximal tubule on chip model phenocopies Lowe syndrome and Dent II disease tubulopathy.

GEO Series GSE171848. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2021View details →
geo24/100

A colorectal cancer 3D bioprinting workflow as a platform for disease modelling and chemotherapeutic screening

GEO Series GSE181722. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2021View details →
geo24/100

An early-stage 3D fibroblast-featured tumor model mimics the gene expression of the naïve tumor microenvironment, including cancer progression and drug resistance phenotype.

GEO Series GSE294100. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2025View details →
geo24/100

TGF-beta dynamically controls epithelial identity in a 3D model of human epiblast [RNAseq_ZNF398_OE]

GEO Series GSE294582. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2025View details →
geo24/100

Enhanced Media Optimize Bovine Myogenesis in 2D and 3D Models for Cultivated Meat Applications [in vivo scRNA-Seq]

GEO Series GSE290556. Bos taurus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2025View details →
geo24/100

Particulate matter 10 exposure affects intestinal functionality in both inflamed 2D intestinal epithelial cell and 3D intestinal organoid models

GEO Series GSE227514. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2023View details →
geo24/100

Quiescent horizontal basal stem cells act as a niche for olfactory neurogenesis in a 3D organoid model

GEO Series GSE257536. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2025View details →
geo24/100

A 3D Tumor Spheroid Model with Robust T Cell Infiltration for Evaluating Immune Cell Engagers

GEO Series GSE295993. Homo sapiens. 54 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2025View details →
geo24/100

Improved maturity and yield of pluripotent stem cell-derived hepatocytes for 2D and 3D modeling of human liver pathophysiology

GEO Series GSE152390. Homo sapiens. 13 samples. Type: Expression profiling by high throughput sequencing; Third-party reanalysis.

openGEO-OpenFeb 2022View details →
geo20/100

3D genome landscaping of in vitro totipotent cellular models [ATAC-Seq]

GEO Series GSE299615. Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo20/100

RNA-Seq analysis of Harlequin Ichrthyosis skin, HI 3D model ABCA12 CRISPR-Cas9 KO cell line

GEO Series GSE131903. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2020View details →
geo20/100

3D genome landscaping of in vitro totipotent cellular models [CUT&Tag]

GEO Series GSE299619. Mus musculus. 15 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo20/100

The development of mucositis by everolimus treatment of an oral 3D tissue model

GEO Series GSE213650. Homo sapiens. 17 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2023View details →
geo20/100

3D Model Enhances Human Glia conversion to Neurons with Dopaminergic Functional and Molecular Traits Or: 3D Model Enhances Human Glia conver-sion to Induced Dopamine Neurons?

GEO Series GSE242076. Homo sapiens. 28 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2024View details →
geo20/100

3D genome landscaping of in vitro totipotent cellular models [Hi-C]

GEO Series GSE299616. Mus musculus. 6 samples. Type: Other.

openGEO-OpenDec 2025View details →
geo20/100

Modelling G2019S-LRRK2 sporadic Parkinson’s disease in 3D midbrain organoids

GEO Series GSE125234. Homo sapiens. 4 samples. Type: Expression profiling by array.

openGEO-OpenFeb 2019View details →
geo20/100

Generation of matched patient-derived xenograft in vitro-in vivo models using 3D macroporous hydrogels for the study of liver cancer

GEO Series GSE109955. Homo sapiens. 50 samples. Type: Expression profiling by high throughput sequencing; Genome variation profiling by high throughput sequencing.

openGEO-OpenJan 2018View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record