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Figure 2 from: Nilsson RH, Taylor AFS, Adams RI, Baschien C, Bengtsson-Palme J, Cangren P, Coleine C, Daniel H-M, Glassman SI, Hirooka Y, Irinyi L, Iršėnaitė R, Martin-Sanchez PM, Meyer W, Oh S-Y, Sampaio JP, Seifert KA, Sklenář F, Stubbe D, Suh S-O, Summerbell R, Svantesson S, Unterseher M, Visagie CM, Weiss M, Woudenberg JHC, Wurzbacher C, den Wyngaert SV, Yilmaz N, Yurkov A, Kõljalg U, Abarenkov K (2018) Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK). MycoKeys 28: 65-82. https://doi.org/10.3897/mycokeys.28.20887
Figure 2 Krona chart of the taxonomic affiliation of the built environment sequences down to order level. The Krona chart lists all annotated built environment sequences except those classified as Fungi sp. (32%) and those of non-fungal origin (1%). An interactive version of the Krona chart is provided as Supplementary material 4. The figure is based on Abarenkov et al. (2016) plus the data added during the workshop, such that it indicates the scientific state of ITS-based Sanger-derived sequencing of the built mycobiome as of spring 2017.
Figure 1 from: Nilsson RH, Taylor AFS, Adams RI, Baschien C, Bengtsson-Palme J, Cangren P, Coleine C, Daniel H-M, Glassman SI, Hirooka Y, Irinyi L, Iršėnaitė R, Martin-Sanchez PM, Meyer W, Oh S-Y, Sampaio JP, Seifert KA, Sklenář F, Stubbe D, Suh S-O, Summerbell R, Svantesson S, Unterseher M, Visagie CM, Weiss M, Woudenberg JHC, Wurzbacher C, den Wyngaert SV, Yilmaz N, Yurkov A, Kõljalg U, Abarenkov K (2018) Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK). MycoKeys 28: 65-82. https://doi.org/10.3897/mycokeys.28.20887
Figure 1 Analysis of the built environment sequences for country of collection. Country centroids based on the geographical centres of contiguous country land masses are marked with bubbles of different size on the global map to indicate the number of built environment sequences originating from these countries as stated explicitly in the underlying INSDC records or as restored during the present effort and in Abarenkov et al. (2016) (57 distinct countries, sequence count ranging from 1 to 3,091). The figure is based on Abarenkov et al. (2016) plus the data added during the workshop, such that it indicates the scientific state of ITS-based Sanger-derived sequencing of the built mycobiome as of spring 2017.
Рис. 1. Рисуночный кΛюч ΑΛя опреΑеΛения виΑов роΑа Hofmaenneria Gerlach, Meyl, 1957: A, F, J, M, O, Q, T, U — гоΛова самца; C, G, K — гоΛова самки; B, I, N, P, R, V — заΑний конец самца; D, H, L — заΑний конец самки; E — теΛо самца цеΛиком; S — теΛо самки цеΛиком Fig. 1. Picture key for identifying species of the genus Hofmaenneria Gerlach, Meyl, 1957: A, F, J, M, O, Q, T, U — head of male; C, G, K — head of female; B, I, N, P, R, V — posterior body end of male; D, H, L — posterior body end of female; E — male, entire body; S — female, entire body in Review of the genus Hofmaenneria Gerlach, Meyl 1957 (Nematoda, Monhysterida)
Рис. 1. Рисуночный кΛюч ΑΛя опреΑеΛения виΑов роΑа Hofmaenneria Gerlach, Meyl, 1957: A, F, J, M, O, Q, T, U — гоΛова самца; C, G, K — гоΛова самки; B, I, N, P, R, V — заΑний конец самца; D, H, L — заΑний конец самки; E — теΛо самца цеΛиком; S — теΛо самки цеΛиком Fig. 1. Picture key for identifying species of the genus Hofmaenneria Gerlach, Meyl, 1957: A, F, J, M, O, Q, T, U — head of male; C, G, K — head of female; B, I, N, P, R, V — posterior body end of male; D, H, L — posterior body end of female; E — male, entire body; S — female, entire body
FIGURE 1 in A New Species Of Dicordylus Lacordaire, 1863 From Brazil (Coleoptera, Belidae, Pachyurinae, Agnesiotidini), With A New Record Of D. Serranus Vanin 1976 For Brazil J R M. M Abstract
FIGURE 1. Dicordylus vanini sp. nov., female holotype from Brazil; total length = 10.5 mm.
Fig. 6 in Potential herbicidal effect of synthetic chalcones on the initial growth of sesame, Sesamum indicum L., and brachiaria, Urochloa decumbens (Stapf) R. D. Webster
Fig. 6. Percentage of growth inhibition/stimulus of root parts of brachiaria seedlings [Urochloa decumbens (Stapf)R.D. Webster] grown for five days in water solutions containing the chalcones, or analogues, or Glyphosate®, in comparison to the positive control (distilled water). The chalcones are identified in the figure 2. *Indicates a significant difference in relation to the control, p<0.05.
Fig. 3 in Potential herbicidal effect of synthetic chalcones on the initial growth of sesame, Sesamum indicum L., and brachiaria, Urochloa decumbens (Stapf) R. D. Webster
Fig. 3. Percentage of growth inhibition/stimulus of shoot parts of sesame seedlings (Sesamum indicum L.) grown for five days in water solutions containing the chalcones, or analogues, or Glyphosate®, in comparison to the positive control (distilled water). The chalcones are identified in figure 2. *Indicates a significant difference in relation to the control, p<0.05.
Figure 2 from: Tan Y-H, Li D-R, Zhou S-S, Chen Y-J, Bramley GLC, Li B (2018) Premna grandipaniculata (Lamiaceae, Premnoideae), a remarkable new species from north Myanmar. In: Jin X-H, Shui Y-M, Tan Y-H, Kang M (Eds) Plant diversity in Southeast Asia. PhytoKeys 94: 117-123. https://doi.org/10.3897/phytokeys.94.22033
Figure 2 Line drawing of Premna grandipaniculata Y. H. Tan & Bo Li, sp. nov. A a branchlet with leaves and inflorescence B abaxial surface of leaf blade C flowers D. dissected corolla and stamens in a bud E calyx and style.
Figure 1 from: Tan Y-H, Li D-R, Zhou S-S, Chen Y-J, Bramley GLC, Li B (2018) Premna grandipaniculata (Lamiaceae, Premnoideae), a remarkable new species from north Myanmar. In: Jin X-H, Shui Y-M, Tan Y-H, Kang M (Eds) Plant diversity in Southeast Asia. PhytoKeys 94: 117-123. https://doi.org/10.3897/phytokeys.94.22033
Figure 1 Morphological comparisons amongst Premna grandipaniculata (A–C), P. bracteata (D–F) and P. interrupta (G–I). A, D, G habit B, E, H branchlets with leaves C, F, I inflorescences.
Figure 3 from: Tan Y-H, Li D-R, Zhou S-S, Chen Y-J, Bramley GLC, Li B (2018) Premna grandipaniculata (Lamiaceae, Premnoideae), a remarkable new species from north Myanmar. In: Jin X-H, Shui Y-M, Tan Y-H, Kang M (Eds) Plant diversity in Southeast Asia. PhytoKeys 94: 117-123. https://doi.org/10.3897/phytokeys.94.22033
Figure 3 Box plots of two quantitative characters, leaf length (A) and leaf width (B), of Premna grandipaniculata, P. bracteata and P. interrupta. The boxes (rectangle region) represent the interquartile range and the whiskers (vertical line) represent the range excluding the outliers (circles). The three upper, middle and lower lines on the boxes represent the 75%, 50% and 25% of the variables, respectively. The upper and lower ends of the whiskers represent the maximum and minimum values of the variables, respectively. The circles represent the single value, where the variable value exceeds 1.5 times the difference between the 75% and 25%.
Figure 1 from: Garzon-Lopez C, Hattab T, Skowronek S, Aerts R, Ewald M, Feilhauer H, Honnay O, Decocq G, Van De Kerchove R, Somers B, Schmidtlein S, Rocchini D, Lenoir J (2018) The DIARS toolbox: a spatially explicit approach to monitor alien plant invasions through remote sensing. Research Ideas and Outcomes 4: e25301. https://doi.org/10.3897/rio.4.e25301
Figure 1 DIARS toolbox workflow. The green gears correspond to the sections of the toolbox and are accompanied by boxes stating its main goal. The gray gears describe the advantages of the DIARS toolbox.
Figure 3 from: Morigengaowa, Luo J-J, Knapp R, Wei H-J, Liu B-D, Yan Y-H, Shang H (2018) The identity of Hypolepis robusta, as a new synonym of Hypolepis alpina (Dennstaedtiaceae), based on morphology and DNA barcoding and the new distribution. PhytoKeys 96: 35-45. https://doi.org/10.3897/phytokeys.96.23470
Figure 3 Distribution of intra-taxa (black) and inter-taxa (grey) Kimura two parameter (K2P) distances based on rbcL and trnL-F sequences as barcode. Hypolepis alpina and Hypolepis robusta versus the other species of Hypolepis.
Figure 2 from: Morigengaowa, Luo J-J, Knapp R, Wei H-J, Liu B-D, Yan Y-H, Shang H (2018) The identity of Hypolepis robusta, as a new synonym of Hypolepis alpina (Dennstaedtiaceae), based on morphology and DNA barcoding and the new distribution. PhytoKeys 96: 35-45. https://doi.org/10.3897/phytokeys.96.23470
Figure 2 Phylogeny of 16 Hypolepis samples and Blotiella stipitata, Histiopteris incisa, and Pteridium aquilinum subsp. wightianum based on rbcL and trnL-F. Bootstrap values and Bayesian posterior probabilities are shown along branches (ML/BI).
Figure 5 from: Garzon-Lopez C, Hattab T, Skowronek S, Aerts R, Ewald M, Feilhauer H, Honnay O, Decocq G, Van De Kerchove R, Somers B, Schmidtlein S, Rocchini D, Lenoir J (2018) The DIARS toolbox: a spatially explicit approach to monitor alien plant invasions through remote sensing. Research Ideas and Outcomes 4: e25301. https://doi.org/10.3897/rio.4.e25301
Figure 5 Some examples of reconstructed images: A. Sylt island reconstructed image and plot locations (wavelengths: 170R, 65G, 17B). B. Compiègne Forest reconstructed image and plot locations (wavelengths: 207R, 65G, 10B).
Figure 4 from: Morigengaowa, Luo J-J, Knapp R, Wei H-J, Liu B-D, Yan Y-H, Shang H (2018) The identity of Hypolepis robusta, as a new synonym of Hypolepis alpina (Dennstaedtiaceae), based on morphology and DNA barcoding and the new distribution. PhytoKeys 96: 35-45. https://doi.org/10.3897/phytokeys.96.23470
Figure 4 Hypolepis alpina. A Frond size (photographed by H. Shang in Fugong) B Lamina (photographed by R. Knapp in Nantou) C Hair (photographed by R. Knapp in Nantou) D The adventitious bud at stipe base (photographed by H. Shang in Fugong) E Indusium (photographed by R. Knapp in Nantou).
Figure 3 from: Garzon-Lopez C, Hattab T, Skowronek S, Aerts R, Ewald M, Feilhauer H, Honnay O, Decocq G, Van De Kerchove R, Somers B, Schmidtlein S, Rocchini D, Lenoir J (2018) The DIARS toolbox: a spatially explicit approach to monitor alien plant invasions through remote sensing. Research Ideas and Outcomes 4: e25301. https://doi.org/10.3897/rio.4.e25301
Figure 3 Example of the workflow used for the mapping of alien plants. The same approach was used for all the tutorials.
Figure 1 from: Morigengaowa, Luo J-J, Knapp R, Wei H-J, Liu B-D, Yan Y-H, Shang H (2018) The identity of Hypolepis robusta, as a new synonym of Hypolepis alpina (Dennstaedtiaceae), based on morphology and DNA barcoding and the new distribution. PhytoKeys 96: 35-45. https://doi.org/10.3897/phytokeys.96.23470
Figure 1 The distributions of Hypolepis alpina noted by Brownsey (1987, blue line) and new record localities since then (red stars), using a map available from http://219.238.166.215/mcp/index.asp.
Figure 1 from: Sgorbati S, D'Antraccoli M, Citterio S, Gentili R, Peruzzi L (2018) Was Charles Darwin right in his explanation of the 'abominable mystery'? Italian Botanist 5: 25-30. https://doi.org/10.3897/ib.5.24699
Figure 1 Worldwide maximum concentration of early branching families. Red cells highlight the worldwide highest concentration (15/26, about 60%) of 'Archaeangiospermae' sensu Stuessy (2010). Cells in different tones of green highlight three families (Amborellaceae, Austrobaileyaceae, Degeneriaceae) endemic to New Caledonia, NE Australia, and Fiji, respectively. Zealandia continent (yellow dashed line) is drawn according to Mortimer et al. (2017). The distribution of Archaeangiosperm families was obtained from Angiosperm Phylogeny Website (Stevens 2001 onwards), then georeferenced and superimposed through raster analyses in GIS environment, by means of R software (R Core Team 2017).
Figure 4 from: Silva AS, Pitta Groz M, Leandro P, Assis CA, Figueira R (2018) Ichthyological collection of the Museu Oceanográfico D. Carlos I. ZooKeys 752: 137-148. https://doi.org/10.3897/zookeys.752.20086
Figure 4 Geographic area covered by the collection (in darker blue). Plots indicate sites for the 29 georeferenced records.
Figure 3 from: Silva AS, Pitta Groz M, Leandro P, Assis CA, Figueira R (2018) Ichthyological collection of the Museu Oceanográfico D. Carlos I. ZooKeys 752: 137-148. https://doi.org/10.3897/zookeys.752.20086
Figure 3 Temporal profile of the sampling years of the specimens held in the ichthyological collection. Blue dots represent sampling years for each order, for which, in parentheses, the number of specimens is provided. The red curve shows the number of specimens collected per year.
Figure 2 from: Silva AS, Pitta Groz M, Leandro P, Assis CA, Figueira R (2018) Ichthyological collection of the Museu Oceanográfico D. Carlos I. ZooKeys 752: 137-148. https://doi.org/10.3897/zookeys.752.20086
Figure 2 Number and percentage of the orders represented in the dataset. Only the orders with at least 15 specimens are labelled.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.