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894
datasets available to search
ShareScore release 0.9.0
Dataset results
894 results for “Single-cell RNA-seq”
Single-cell transcriptomic analysis links non-myelinating Schwann cells to pro-inflammatory response in the lung [bulk RNA-Seq]
GEO Series GSE235905. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of Drosophila neuroblast tumors induced by the knockdown of prospero, E(z) and trx
GEO Series GSE179154. Drosophila melanogaster. 4 samples. Type: Expression profiling by high throughput sequencing.
High throughput single-cell whole transcriptome analysis of induced cardiomyocytes during direct cardiac reprogramming [RNA-seq]
GEO Series GSE98567. Mus musculus. 574 samples. Type: Expression profiling by high throughput sequencing.
Dissection of gastric homeostasis in vivo facilitates permanent capture of isthmus stem cells in vitro [single-cell RNA-seq]
GEO Series GSE217472. Mus musculus. 14 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of patient-derived cancer-associated fibroblast in vitro cell line models from pancreatic ductal adenocarcinoma
GEO Series GSE301398. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
‘Sertoli cell-only’ phenotype and single-cell RNA-seq define PRAMEF12 as a germline-specific factor for male stem cell maintenance and differentiation [scRNA-seq]
GEO Series GSE117707. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Mast cell tolerance in the skin microenvironment to commensal bacteria is controlled by fibroblasts [single-cell RNA-seq]
GEO Series GSE223178. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
A single-cell RNA-seq atlas of the pathogenic stage of Schistosoma mansoni identifies a key regulator of blood feeding
GEO Series GSE146737. Schistosoma mansoni. 15 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell RNA-seq study of E13.5 and P7 brain and Spinal Cord Pdgfra-GFP positive samples during development in Mice.
GEO Series GSE95194. Mus musculus. 26 samples. Type: Expression profiling by high throughput sequencing.
Localized EMT reprograms glial progenitors to promote spinal cord repair [single-cell RNA-seq]
GEO Series GSE164944. Danio rerio. 1 samples. Type: Expression profiling by high throughput sequencing.
Epithelial miR-141 regulates IL-13-induced airway mucus production [single-cell RNA-seq]
GEO Series GSE164015. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of Kitaake rice roots grown in gel, and non-compacted soil conditions
GEO Series GSE251706. Oryza sativa. 18 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of mouse hypothalamus
GEO Series GSE74672. Mus musculus. 2881 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq analysis of prostate cancer cells
GEO Series GSE145845. Homo sapiens. 472 samples. Type: Expression profiling by high throughput sequencing.
Tracing the formation of hematopoietic stem cells in mouse embryos by single-cell functional and RNA-Seq analyses
GEO Series GSE67123. Mus musculus. 216 samples. Type: Expression profiling by high throughput sequencing.
Dynamics of phage-host interactions in Bacteroides fragilis resolved by single-cell transcriptomics [bulk RNA-Seq data]
GEO Series GSE318809. Bacteroides fragilis. 6 samples. Type: Expression profiling by high throughput sequencing.
Unravelling subclonal heterogeneity and aggressive disease states in TNBC through single-cell RNA-seq
GEO Series GSE118390. Homo sapiens. 1539 samples. Type: Expression profiling by high throughput sequencing; Other.
A single-cell RNA-seq atlas of the pathogenic stage of Schistosoma mansoni identifies a key regulator of blood feeding [scRNA-Seq]
GEO Series GSE146736. Schistosoma mansoni. 9 samples. Type: Expression profiling by high throughput sequencing.
The single-cell transcriptomic atlas and RORA-mediated 3D epigenomic remodeling in driving corneal epithelial differentiation [RNA-Seq]
GEO Series GSE248926. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion
GEO Series GSE69926. Mus musculus. 71 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.