Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Spatial transcriptomics to dissect molecular signature of cardiac fibroblasts in experimental autoimmune myocarditis
GEO Series GSE248347. Mus musculus. 2 samples. Type: Other.
Deciphering head and neck cancer microenvironment: Single‐cell and spatial transcriptomics reveals human papillomavirus‐associated differences
GEO Series GSE281978. Homo sapiens. 6 samples. Type: Other.
Spatial transcriptomic profiling of bronchioles using GeoMx DSP
GEO Series GSE316672. Homo sapiens. 92 samples. Type: Other.
High-depth spatial transcriptome analysis by photo-isolation chemistry
GEO Series GSE143413. Mus musculus; Homo sapiens. 45 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics of murine bone marrow megakaryocytes at single-cell resolution
GEO Series GSE224838. Mus musculus. 83 samples. Type: Expression profiling by high throughput sequencing.
Spatial and single-cell transcriptomics reveal the reorganization of cerebellar microglia with aging
GEO Series GSE290806. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Single cell- Cluster-RNA seq and Spatial Transcriptomics from the trunk of mouse embryos of different genotypes (wild type, Pax2-GFP, Pax2-GFP; Gata3 knockout) and developmental stages (E8.75, E9.5, E
GEO Series GSE160136. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation
GEO Series GSE228360. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing; Other.
Spatial and Temporal Variation in the Skin Transcriptome of Atopic Dermatitis Assessed by 1.5 mm Mini Punch Biopsies
GEO Series GSE193309. Homo sapiens. 339 samples. Type: Expression profiling by high throughput sequencing.
Virus-Human Chromatin Interactions Reorganise 3D Genome and Hijack KDM5B for Promoting Metastasis in Nasopharyngeal Carcinoma [10X Visum Spatial Transcriptome]
GEO Series GSE299776. Homo sapiens. 1 samples. Type: Other.
A comprehensive spatial-temporal transcriptomic analysis of differentiating nascent mouse lens epithelial and fiber cells
GEO Series GSE113887. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Spatially Resolved Transcriptomic Signatures of Hippocampal Subregions and Arc-Expressing Ensembles in Active Place Avoidance Memory [RNA-seq]
GEO Series GSE279272. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
Open-ST: High-resolution spatial transcriptomics in 3D
GEO Series GSE251926. Homo sapiens; Mus musculus; synthetic construct. 27 samples. Type: Other.
Spatial transcriptomics of post-mortem lung tissue from COVID-19 donors
GEO Series GSE190732. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Integrated analysis of single-cell and spatial transcriptomics in keloids
GEO Series GSE181297. Homo sapiens. 7 samples. Type: Expression profiling by high throughput sequencing.
Resolve smFISH spatial transcriptomics on the GL261 tumor bearing hemisphere, treated with PBS / aPD1 / CSI / CSI+aPD1
GEO Series GSE292668. Mus musculus. 8 samples. Type: Other.
Spatial transcriptomics analysis of soft tissue sarcomas.
GEO Series GSE212526. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
RAINBOW-seq to capture the spatial transcriptome of bacterial biofilm
GEO Series GSE197541. Escherichia coli BW25113. 38 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomic studies of the small intestine from WT and DDX5△IEC (KO) mice
GEO Series GSE184564. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics]
GEO Series GSE261958. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.