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Table 3 in Oviposition of AedeS japoNiCUS japoNiCUS (Diptera: Culicidae) and associated native species in relation to season, temperature and land use in western Germany
<p><b>Table 3</b> Coefficients and statistically significant output of predictor variables as calculated by the generalised linear model</p><table><tbody><tr><th></th><th>Estimate</th><th>SE</th><th><i>Z</i> -value</th><th><i>P</i></th></tr></tbody><tbody><tr><th>(Intercept)</th><td>− 29.890</td><td>15.100</td><td>− 19.790</td><td>0.0478*</td></tr><tr><th>Temp_mean</th><td>0.2126</td><td>0.0933</td><td>22.800</td><td>0.0226*</td></tr><tr><th>Cxbin</th><td>0.2732</td><td>0.3148</td><td>0.868</td><td>0.3854</td></tr><tr><th>Plbbin</th><td>0.5999</td><td>0.2253</td><td>26.630</td><td>0.0077*</td></tr><tr><th>F100</th><td>0.4931</td><td>0.4826</td><td>10.220</td><td>0.3068</td></tr><tr><th>F10</th><td>0.7486</td><td>0.4127</td><td>18,140</td><td>0.0697</td></tr><tr><th>F/S</th><td>0.8715</td><td>0.3728</td><td>23.380</td><td>0.0194*</td></tr><tr><th>S10</th><td>10.770</td><td>0.3347</td><td>32.170</td><td>0.0013*</td></tr><tr><th>Ngbi</th><td>0.0412</td><td>0.1157</td><td>0.356</td><td>0.722</td></tr><tr><th>Nhbu</th><td>0.0001</td><td>0.0251</td><td>0.003</td><td>0.9972</td></tr><tr><th>Ngki</th><td>0.0295</td><td>0.0432</td><td>0.684</td><td>0.4941</td></tr><tr><th>Nsei</th><td>− 0.0362</td><td>0.0609</td><td>− 0.594</td><td>0.5528</td></tr><tr><th>Ntei</th><td>− 0.0845</td><td>0.0917</td><td>− 0.922</td><td>0.3566</td></tr><tr><th>Ngfi</th><td>0.1002</td><td>0.0832</td><td>12.050</td><td>0.2283</td></tr><tr><th>Nrbu</th><td>0.0648</td><td>0.0456</td><td>14.200</td><td>0.1557</td></tr></tbody></table><p>Characteristics:negative binomial,link = log, <i>z</i> -values calculated by Wald-test. Response variable:total of <i>Ae. japonicus japonicus</i> -positive ovitraps per location Predictors:Temp_mean = Mean water temperature,binary native taxa occurrence:Cxbin = <i>Cx. pipiens</i> s.l., <i>Plbbin An. plumbeus</i>, land use data: percentage forest:F100 = 100% forest,F10 = 60% forest,F/S = 50% forest,S10 = 40% forest,number of tree species in a 10 m radius of the trap locations (the tree species occurred in more than five transects):Nrbu: <i>Fagus sylvatica</i>, Nhbu: <i>Carpinus betulus</i>, Ngbi: <i>Betula pendula</i>, Nsei: <i>Quercus robur</i>, Ntei: <i>Quercus petreae</i>, Ngfi: <i>Picea abies</i>, Ngki: Pinus sylvestris</p>
TABLE 3 in A new genus and species of barnacle (Cirripedia, Verrucomorpha) associated with vents of the Lau Back-Arc Basin: its gross morphology, inferred first juvenile stage and affinities
<p>TABLE 3. — Comparison of two juvenile and four adult characters in two neoverrucid and one verrucid genus.</p><table><tbody><tr><th></th><th>Neoverruca</th><th>Imbricaverruca</th><th><i>Verruca</i></th></tr></tbody><tbody><tr><th>1) Juvenile pedunculate stages</th><td>Several stages pedunculate</td><td>Likely several stages</td><td>Peduncle vestigial</td></tr><tr><th>2) Juvenile carina</th><td>Higher than wide</td><td>Wider than high</td><td>Higher than wide</td></tr><tr><th>3) Adult median latus</th><td>Vestigial</td><td>Well-developed</td><td>Lost</td></tr><tr><th>4) Imbricating plates</th><td>Reduced in number, deciduous</td><td>Complete, well-developed</td><td>Lost</td></tr><tr><th>5) Fixed scutum & tergum</th><td>Normal, higher than wide</td><td>Reduced wider than high</td><td>As wide as high</td></tr><tr><th>6) Rostrum & carina</th><td>Normal, higher than wide*</td><td>Reduced, wider high</td><td>As wide as high</td></tr></tbody></table><p>*R-C gap less on movable side, as in all three genera.</p>
TABLE 2 in A new genus and species of barnacle (Cirripedia, Verrucomorpha) associated with vents of the Lau Back-Arc Basin: its gross morphology, inferred first juvenile stage and affinities
<p>TABLE 2. — Comparison between the primordial plates of the earliest juvenile stages of the principal suborders of thoracic Cirripedia (See Fig. 6 for corresponding figures and text for a full explanation).</p><table><tbody><tr><th><b>Taxon/Character</b></th><th><b>Carinal proportions</b></th><th><b>Carinal of position</b></th><th><b>Terga and scuta of each side</b></th></tr></tbody><tbody><tr><th>Lepadomorpha (Fig. 6A)</th><td>Higher than wide and longer than terga</td><td>Extending up between terga</td><td>Symmetrical</td></tr><tr><th>Scalpellomorpha (Fig. 6B)</th><td>Higher than wide and nearly as long as terga</td><td>Extending up between terga</td><td>Symmetrical</td></tr><tr><th>Verrucomorpha</th></tr><tr><th>Neoverrucidae (Fig. 6C)</th><td>Higher than wide and shorter than terga</td><td>Extending up between terga</td><td>Initially symmetrical</td></tr><tr><th>X-juvenile (Fig. 6D)</th><td>Wider than high, shorter than terga and perhaps displaced to one side</td><td>Not extending up between terga</td><td>Scuta if not terga initially symmetrical</td></tr><tr><th>Verrucidae (Fig. 6E)</th><td>About as wide as high, shorter than terga and displaced to one side</td><td>Not extending up between terga</td><td>Distinctly asymmetrical</td></tr><tr><th>Balanomorpha (Fig. 6F)</th><td>Higher than wide</td><td>Not extending up between terga</td><td>Symmetrical</td></tr></tbody></table>
RatXcan: A framework for cross-species integration of genome-wide association and gene expression data
<p>Data for paper</p> <p><span>RatXcan: A framework for cross-species integration of genome-wide association and gene expression data</span></p> <p><span>Natasha Santhanam</span><span><span>1</span></span><span><span>†</span></span><span>, Sandra Sanchez-Roige</span><span><span>2,3,4</span></span><span><span>†</span></span><span>, Sabrina Mi</span><span><span>2</span></span><span>, Yanyu Liang</span><span><span>1</span></span><span>, Apurva S. Chitre</span><span><span>2</span></span><span>, Daniel Munro</span><span><span>2</span></span><span>, Denghui Chen</span><span><span>2</span></span><span>, Riyan Cheng</span><span><span>2</span></span><span>, Jianjun Gao</span><span><span>2</span></span><span>, Angel Garcia-Martinez</span><span><span>6</span></span><span>, Anthony M. George</span><span><span>5</span></span><span>, Alexander F. Gileta</span><span><span>2</span></span><span>, Wenyan Han</span><span><span>6</span></span><span>, Katie Holl</span><span><span>7</span></span><span>, Alesa Hughson</span><span><span>8</span></span><span>, Christopher P. King</span><span><span>9</span></span><span>, Alexander C. Lamparelli</span><span><span>9</span></span><span>, Connor D. Martin</span><span><span>5</span></span><span>, Festus Nyasimi</span><span><span>1</span></span><span>, Celine L. St. Pierre</span><span><span>2</span></span><span>, Sarah Sumner</span><span><span>1</span></span><span>, Jordan Tripi</span><span><span>9</span></span><span>, Tengfei Wang</span><span><span>6</span></span><span>, Hao Chen</span><span><span>6</span></span><span>, Shelly Flagel</span><span><span>8</span></span><span>, Keita Ishiwari</span><span><span>5,10</span></span><span>, Paul Meyer</span><span><span>5,9</span></span><span>, Oksana Polesskaya</span><span><span>2</span></span><span>, Laura Saba</span><span><span>11</span></span><span>, Leah C. Solberg Woods</span><span><span>12</span></span><span>, Abraham A. Palmer</span><span><span>2,3</span></span><span>*, Hae Kyung Im</span><span><span>1</span></span><span>*</span></p> <p><span> </span></p> <p><span>[1] Department of Medicine, Section of Genetic Medicine, The University of Chicago, Chicago, IL, 60637, USA</span></p> <p><span>[2] Department of Psychiatry, University of California San Diego, La Jolla, CA, 92093, USA</span></p> <p><span>[3] Institute for Genomic Medicine, University of California San Diego, La Jolla, CA, 92093, USA</span></p> <p><span>[4] Department of Medicine, Division of Genetic Medicine, Vanderbilt University Medical Center, Nashville, TN, USA</span></p> <p><span>[5] University at Buffalo, Clinical and Research Institute on Addictions University at Buffalo, Buffalo, NY, 14203, USA</span></p> <p><span>[6] University of Tennessee Health Science Center, Department of Pharmacology, Addiction Science and Toxicology, Memphis, TN, 38120, USA</span></p> <p><span>[7] Medical College of Wisconsin, Department of Pediatrics, Milwaukee, WI, 53226, USA</span></p> <p><span>[8] University of Michigan, Department of Psychiatry, Ann Arbor, MI, 48109, USA</span></p> <p><span>[9] University at Buffalo, Department of Psychology, Buffalo, NY, 14260, USA</span></p> <p><span>[10] University at Buffalo, Pharmacology and Toxicology University at Buffalo, Buffalo, NY, 14203, USA</span></p> <p><span>[11] University of Colorado Anschutz Medical Campus, Department of Pharmaceutical Sciences, Aurora, CO 80045, USA</span></p> <p><span>[12] Wake Forest University School of Medicine, Department of Internal Medicine, Winston-Salem, NC, 27157, USA</span></p>
Table 3 in Three new species of Spongiopsyllus Johnsson, 2000 (Copepoda: Siphonostomatoida: Entomolepididae) associated with Aplysina cauliformis (Carter, 1882) (Porifera: Demospongiae) from Todos-os-Santos Bay, Northeastern Brazil
<p><b>Table 3.</b> <i>Spongiopsyllus aramisi</i> sp.nov., armature formula of L1–L4.</p><table><tbody><tr><th></th><th><b>coxa</b></th><th><b>basis</b></th><th><b>exopod</b></th><th><b>endopod</b></th></tr></tbody><tbody><tr><th><b>L1</b></th><td>0-0</td><td>1-1</td><td>I-1; I-1; II,I,4</td><td>0-1; 0-2; 1,5</td></tr><tr><th><b>L2</b></th><td>0-1</td><td>1-0</td><td>I-1; I-1; III,I,4</td><td>0-1; 0-2; 1,2,2</td></tr><tr><th><b>L3</b></th><td>0-0</td><td>0-0</td><td>I-1; I-1; II,I,4</td><td>0-0; 0-1; 0,1,1</td></tr><tr><th><b>L4</b></th><td></td><td>0-0</td><td>I-0; I-1; II,I,3</td><td>absent</td></tr></tbody></table>
Table 1 in Three new species of Spongiopsyllus Johnsson, 2000 (Copepoda: Siphonostomatoida: Entomolepididae) associated with Aplysina cauliformis (Carter, 1882) (Porifera: Demospongiae) from Todos-os-Santos Bay, Northeastern Brazil
<p><b>Table 1.</b> <i>Spongiopsyllus athosi</i> sp.nov., armature formula of L1–L4.</p><table><tbody><tr><th></th><th><b>coxa</b></th><th><b>basis</b></th><th><b>exopod</b></th><th><b>endopod</b></th></tr></tbody><tbody><tr><th><b>L1</b></th><td>0-1</td><td>0-1</td><td>I-1; I-1; III,3</td><td>0-1; 0-2; 1,5</td></tr><tr><th><b>L2 L3 L4</b></th><td>0-1 0-0 0-0</td><td>0-0 0-0 0-0</td><td>I-1; I-1; III,I,4 I-1; I-1; II,I,4 I-1; I-0; II,I,3</td><td>0-1; 0-2; 1,2,2 0-0; 0-1; 0,1,1 absent</td></tr><tr><th><b>L1</b></th><td>0-1</td><td>1-1</td><td>I-1; I-1; III,4</td><td>0-1; 0-1; 1,5</td></tr><tr><th><b>L2</b></th><td>0-1</td><td>1-0</td><td>I-1; I-1; III,I,4</td><td>0-1; 0-2; 1,2,2</td></tr><tr><th><b>L3</b></th><td>0-0</td><td>0-0</td><td>I-1; I-1; II,I,4</td><td>0-0; 0-1; 0,1,1</td></tr><tr><th><b>L4</b></th><td>0-0</td><td>0-0</td><td>I-1; I-1; II,I,3</td><td>absent</td></tr></tbody></table>
Appendix 3 of "Analyses of three-dimensional species associations reveal departures from neutrality in a tropical forest"
<p>Temporal changes in three-dimensional structure of crowns in Luquillo, Puerto Rico. Each axis represents the overlap of one species over the other, measured as standardized effect sizes (SES). That is, deviations from a null model that randomizes crown three-dimensional positions. A high value of "SES of <em>Guarea guidonia</em> over <em>Psychotria brachiata</em>" means that <em>Guarea guidonia</em> shades <em>Psychotria brachiata</em> more than expected by chance, and so on.<br> <br> The coloured dots in the background of the figure represent all the observed relationships between species. Gray dots represent random relationships between pairs of species (i.e. similar to the expected by the null model). Black dots represent horizontal segregation between species. Blue dots represent horizontal aggregation but vertical segregation between species. Red dots represent three-dimensional aggregation between species.<br> <br> The larger green or red dots connected by lines represent the temporal changes observed for the relationship between the two target species in each figure. There are four censuses represented. Larger dots represent the more recent censuses. The green dots reflect the relationship between the two target species in the low-disturbance area within the Luquillo Forest Dynamics Plot. The red dots reflect the relationship between the two target species in the high-disturbance area within the Luquillo Forest Dynamics Plot.</p>
Elevational range-sizes and edaphic associations for plant species of the Mount Kinabalu region of Borneo (Sabah, Malaysia)
<p>Identifying physical and ecological boundaries that limit where species can occur is important for predicting how those species will respond to global change. The island of Borneo encompasses a wide range of habitats that support some of the highest richness on Earth, making it an ideal location for investigating ecological mechanisms underlying broad patterns of species distribution. We tested variation in richness and range-size in relation to edaphic specialization and vegetation zone boundaries using 3060 plant species from 193 families centered around the elevational gradient of Mt. Kinabalu, Borneo. Across species, average range-size increased with elevation, consistent with Rapoport's rule. However, plants associated with ultramafic soil, which is low in nutrient and water availability and often has high concentrations of heavy metals, had larger range-sizes and greater richness than expected along the elevational gradient, as compared to a null model with randomization of edaphic association. In contrast, non-ultramafic species had smaller range-sizes and lower richness than expected. These results suggest that tolerance of resource limitation may be associated with wider range-sizes, whereas species intolerant of edaphic stress may have narrower range-sizes, possibly owing to more intense competition in favorable soil types. Using elevation as a predictor of average range-sizes, we found that piece-wise models with breakpoints at vegetation zone transitions explained species distributions better than models that did not incorporate ecological boundaries. The greatest relative increases in range-size with respect to elevation occurred mid-elevation, within the montane cloud forest vegetation zone. Expansion of average range-size across an area without physical boundaries may indicate a shift in ecological strategy and importance of biotic versus abiotic stressors. Our results indicate that elevational range-size patterns are structured by ecological constraints such as species' edaphic association, which may limit the ability of species to migrate up or down mountains in response to climate change.</p>
Figure 7 in Two new genera and two new species of the mite family Neopygmephoridae (Acari: Heterostigmata) associated with small mammals from USA
Figure 7 Theriadania venusta sp. nov., female: A – gnathosoma in dorsal view, B – gnathosoma
Fig. 1 in The habitat preference of dung beetle species associated with elephant dung of the Malay Peninsula
Fig. 1. Map of all the localities where dung beetle sampling was carried out.
Figure 5 in Acridomorpha (Orthoptera) species associated with the protected wetlands of Santa Lucía, Montevideo, Uruguay
Figure 5. Acumulation species curve of Acridomorpha collected from Humedales de Santa Lucía.
Figure 1 in Acridomorpha (Orthoptera) species associated with the protected wetlands of Santa Lucía, Montevideo, Uruguay
Figure 1. Study area: Humedales de Santa Lucía. Montevideo, Uruguay
Figure 6 in A new species of Paracarophenax (Acari: Heterostigmata: Acarophenacidae) associated with Triplax scutellaris (Coleoptera: Erotylidae) from European Russia
Figure 6 DIC micrograph of Pyemotes dryas(Vitzthum, 1923) female: gnathosoma in ventral view.
Figure 7 in A new species of Asphondylia (Diptera: Cecidomyiidae) and a key to separate species of the genus associated with Asteraceae from Neotropical region
Figure 7. Relative size of inner and outer teeth of the larval prothoracic spatula of Asphondylia species associated with Asteraceae in Neotropical region. (A, B) Inner teeth approximately equal in size as outer, (A) Asphondylia salvadorensis, (B) A. corbulae; (C, D, E) Inner teeth reach at least ½ of outer teeth, (C) Inner incision absent, A. moheni, (D) Inner incision deep and narrow, A. caleae, (E) Inner incision shallow, A. trixidis; (F) Inner teeth of spatula minute, inner incision flat and wide, A. ulei. Figures 7A, 7D, 7E modified from Möhn (1959), 7B from Möhn (1960); 7C, 7F from Möhn (1973).
Figure 4 in A new species of Asphondylia (Diptera: Cecidomyiidae) and a key to separate species of the genus associated with Asteraceae from Neotropical region
Figure 4. Asphondylia cipo sp. nov. (A, B) Pupa in ventral view; (C) Posterior region of pupa in dorsal view; (D) Prothoracic spiracle and the accessory structure.
Figure 1 in A new species of Asphondylia (Diptera: Cecidomyiidae) and a key to separate species of the genus associated with Asteraceae from Neotropical region
Figure 1. Asphondylia cipo sp. nov.(A) Head in frontal view;(B) Male 3rd flagellomere;(C) Female 3rd flagellomere; (D) Male 9th-12th flagellomeres; (E) Female 9th-12th flagellomeres;(F) Palpus; (G) First tarsomere with apicoventral spur; (H) Foretarsal claw and empodium; (I) Midtarsal claw and empodium;(J) Foretarsal claw and empodium.
Figure 8 in A new species of Asphondylia (Diptera: Cecidomyiidae) and a key to separate species of the genus associated with Asteraceae from Neotropical region
Figure 8. Terminal segment of Asphondylia species. (A) Asphondylia glomerata, (B) A. ajjalai, (C) A. salvadorensis, (D) A. ulei, (E) A. gochnatiae, (F) A. serrata. Figure 8A modified from Gagné et al. (2001), 8B, 8C from Möhn (1959), 8D from Möhn (1973), 8E from Maia (2004).
Figure 6 in A new species of Asphondylia (Diptera: Cecidomyiidae) and a key to separate species of the genus associated with Asteraceae from Neotropical region
Figure 6. Stem and petiole galls induced by Asphondylia cipo sp. nov. in Lessingianthus warmingianus (Baker) H. Rob. (Asteraceae). Arrow indicates a petiole gall.
Figure 3 in A new species of Asphondylia (Diptera: Cecidomyiidae) and a key to separate species of the genus associated with Asteraceae from Neotropical region
Figure 3. Asphondylia cipo sp. nov. (A, B) Abdominal segments 7 and 8 and ovipositor in ventro-lateral view. Abbreviation: cl = cercilike lobes.
Figure 2 in A new species of Asphondylia (Diptera: Cecidomyiidae) and a key to separate species of the genus associated with Asteraceae from Neotropical region
Figure 2. Asphondylia cipo sp. nov. (A, B) Male abdomen in lateral view; (C, D) Male terminalia in dorsal view. Abbreviations: ce = cercus, gc = gonocoxite, gs = gonostyle, hy = hypoproct, s7 = sternite 7, th = teeth of gonostyle.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.