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736 results for “biological collections”
Linked collectors and determiners for: Natural History Collections of the Faculty of Biology AMU.
Natural history specimen data linked to collectors and determiners held within, "Natural History Collections of the Faculty of Biology AMU". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/84b18cce-083a-4464-bee8-25b2083a17cd">https://bionomia.net/dataset/84b18cce-083a-4464-bee8-25b2083a17cd</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/84b18cce-083a-4464-bee8-25b2083a17cd">https://gbif.org/dataset/84b18cce-083a-4464-bee8-25b2083a17cd</a>. Formatted as a Frictionless Data package.
Figures 1-6 from: Fateryga AV, Fateryga VV (2021) A further study of the nesting biology of Leptochilus (Neoleptochilus) regulus (de Saussure, 1855) (Hymenoptera, Vespidae, Eumeninae). In: Proshchalykin MYu, Gokhman VE (Eds) Hymenoptera studies through space and time: A collection of papers dedicated to the 75th anniversary of Arkady S. Lelej. Journal of Hymenoptera Research 84: 75-86. https://doi.org/10.3897/jhr.84.66652
Figures 1-6 Bionomics of Leptochilus regulus (de Saussure, 1855) 1 female arriving with a portion of the building material 2, 3 female arriving with a prey item 4 female inspecting a willow stem while searching a place for a new nest 5 male perching in front of the nest 6 female of Chrysis ragusae De Stefani, 1888 waiting at the nest site.
Figures 11-14 from: Fateryga AV, Fateryga VV (2021) A further study of the nesting biology of Leptochilus (Neoleptochilus) regulus (de Saussure, 1855) (Hymenoptera, Vespidae, Eumeninae). In: Proshchalykin MYu, Gokhman VE (Eds) Hymenoptera studies through space and time: A collection of papers dedicated to the 75th anniversary of Arkady S. Lelej. Journal of Hymenoptera Research 84: 75-86. https://doi.org/10.3897/jhr.84.66652
Figures 11-14 SEM micrographs of two cocoon layers of Leptochilus regulus (de Saussure, 1855) 11 dissection of the outer layer with a part of the inner surface of the outer cell "partition" 12 the same layer from inside, close up 13 the inner layer (free part) from inside 14 the same, close up. Arrow indicates the cocoon on the dissection; figure parenthesis indicates the material of the "partition".
Figures 8-10 from: Fateryga AV, Fateryga VV (2021) A further study of the nesting biology of Leptochilus (Neoleptochilus) regulus (de Saussure, 1855) (Hymenoptera, Vespidae, Eumeninae). In: Proshchalykin MYu, Gokhman VE (Eds) Hymenoptera studies through space and time: A collection of papers dedicated to the 75th anniversary of Arkady S. Lelej. Journal of Hymenoptera Research 84: 75-86. https://doi.org/10.3897/jhr.84.66652
Figures 8-10 Nests of Leptochilus regulus (de Saussure, 1855) 8 part of the nest of female A (two cells provisioned with anobiid larvae and the closing plug) 9 part of the nest of female B (two cells with cocoons of Chrysis ragusae De Stefani, 1888 and the closing plug) 10 part of the nest collected in 2010 (four cells with prepupae in cocoons). Scale bars 1 cm; arrows indicate a small amount of bonded soil in the closing plugs.
Figure 7 from: Fateryga AV, Fateryga VV (2021) A further study of the nesting biology of Leptochilus (Neoleptochilus) regulus (de Saussure, 1855) (Hymenoptera, Vespidae, Eumeninae). In: Proshchalykin MYu, Gokhman VE (Eds) Hymenoptera studies through space and time: A collection of papers dedicated to the 75th anniversary of Arkady S. Lelej. Journal of Hymenoptera Research 84: 75-86. https://doi.org/10.3897/jhr.84.66652
Figure 7 Chronogram of the activity of two females (A, B) of Leptochilus regulus (de Saussure, 1855) on 26.VI.2020 (solar time).
Figure 5 from: Jureková N, Raschmanová N, Miklisová D, Kováč Ľ (2021) A comparison of collecting methods in relation to the diversity of Collembola in scree habitats. Subterranean Biology 40: 1-26. https://doi.org/10.3897/subtbiol.40.69808
Figure 5 Vertical distribution of species richness and relative abundances of Collembola life forms along scree profiles recorded by two different methods, Abbreviations: SS – soil samples, ST – subterranean traps, 5, 35, 65, 95 – soil/scree depth [cm], A – atmobionts, EP – epigeonts, H – hemiedaphobionts, EU – euedaphobionts, (for site abbreviations, see the "Material and methods" section).
Figure 6 from: Jureková N, Raschmanová N, Miklisová D, Kováč Ľ (2021) A comparison of collecting methods in relation to the diversity of Collembola in scree habitats. Subterranean Biology 40: 1-26. https://doi.org/10.3897/subtbiol.40.69808
Figure 6 Relationship between the relative abundance and the body length of dominant species for each collecting method (axis 1–species rank follows increasing body size), Abbreviations: SS – soil samples with dotted trend line, ST – subterranean traps with solid trend line (for species abbreviations, see the Appendices 1–5).
Figure 4 from: Jureková N, Raschmanová N, Miklisová D, Kováč Ľ (2021) A comparison of collecting methods in relation to the diversity of Collembola in scree habitats. Subterranean Biology 40: 1-26. https://doi.org/10.3897/subtbiol.40.69808
Figure 4 NMS ordination diagram of collembolan communities at five scree sites collected by two sampling methods; the variance explained by the x and y axes is 55% and 20%, respectively, Abbreviations: s – soil samples, t – subterranean traps, life forms: green – epigeonts, blue – hemiedaphobionts, red – euedaphobionts, (for site abbreviations, see the "Material and methods" section, for species abbreviations see the Appendices 1–5).
Figure 3 from: Jureková N, Raschmanová N, Miklisová D, Kováč Ľ (2021) A comparison of collecting methods in relation to the diversity of Collembola in scree habitats. Subterranean Biology 40: 1-26. https://doi.org/10.3897/subtbiol.40.69808
Figure 3 Rarefaction (solid line) and extrapolation (dotted line) of soil collembolan species richness from soil samples (SS) and sampling using subterranean traps (ST). Reference samples are indicated by solid circles, (for site abbreviations, see the "Material and methods" section).
Figure 2 from: Jureková N, Raschmanová N, Miklisová D, Kováč Ľ (2021) A comparison of collecting methods in relation to the diversity of Collembola in scree habitats. Subterranean Biology 40: 1-26. https://doi.org/10.3897/subtbiol.40.69808
Figure 2 Percentage share of Collembola species numbers and dominance recorded by two techniques at five study sites A species numbers (in columns) associated with the sampling method B relative abundance of species (numbers in columns indicate number of specimens), Abbreviations: SS – exclusively in soil samples, ST – exclusively in subterranean traps, both–shared by both methods (for site abbreviations, see the "Material and methods" section).
Figure 1 from: Jureková N, Raschmanová N, Miklisová D, Kováč Ľ (2021) A comparison of collecting methods in relation to the diversity of Collembola in scree habitats. Subterranean Biology 40: 1-26. https://doi.org/10.3897/subtbiol.40.69808
Figure 1 A Location of the study sites B red ellipse – site with subterranean traps at a scree slope, Abbreviations: A – site near Ardovská jaskyňa Cave (Photo: N. Raschmanová), S – site near Silická ľadnica Ice Cave (Photo: N. Raschmanová), B – site at Borinský kras Karst (Photo: A. Mock), ZA – site at the base of the scree gully in Zádielska tiesňava Valley (Photo: P. Ľuptáčik), ZB – site at the upper part of the scree gully in Zádielska tiesňava Valley (Photo: P. Ľuptáčik) C sampling methods, Abbreviations: SS – soil sampling (Photo: Ľ. Kováč), ST – sampling using subterranean traps (Photo: P. Ľuptáčik).
Figure 4 from: Diazgranados M, Funk V (2013) Utility of QR codes in biological collections. PhytoKeys 25: 21-34. https://doi.org/10.3897/phytokeys.25.5175
Figure 4 - Example of plant specimen at the US herbarium with a QR code linking to a Google map of the collection locality. Encoded text: "http://bit.ly/130tnzO".
Figure 3 from: Diazgranados M, Funk V (2013) Utility of QR codes in biological collections. PhytoKeys 25: 21-34. https://doi.org/10.3897/phytokeys.25.5175
Figure 3 - QR code size (side) vs. information for the four levels of error correction (L (purple line): 7% of tolerance; M (green line): 15%; Q (blue line): 25%; and H (red line): 30%). Below the lines QR codes are unreadable by most scanners; above the lines they are all readable.<br> Encoded text (including returns):<br> - 111 characters:<br> "Photographs: http://collections.mnh.si.edu/search/botany/search.php?action=10&irn=10076557&width=495&height=640"<br> - 219 characters:<br> "US National Herbarium<br> Montanoa josei V.A. Funk (Asteraceae)<br> US Sheet No.: 2325539 | Barcode: 00128657<br> Specimen photographs: http://collections.mnh.si.edu/search/botany/search.php?action=10&irn=10076557&width=495&height=640"<br> - 406 characters:<br> "US National Herbarium<br> Montanoa josei V.A. Funk (Asteraceae)<br> Collection: Cuatrecasas, J., Romero Castañeda, R.; 24768; Holotype; 1959-10-10; Colombia; Magdalena; Sierra Nevada de Santa Marta, Hoya del Rio Donachui, Cancurua. Elevation: 2400-2650 m.<br> US Sheet No.: 2325539 | Barcode: 00128657<br> Specimen photographs: http://collections.mnh.si.edu/search/botany/search.php?action=10&irn=10076557&width=495&height=640"<br> - 568 characters:<br> "Smithsonian Institution<br> National Museum of Natural History<br> US National Herbarium<br> Montanoa josei V.A. Funk<br> Family: Asteraceae<br> Collection: Cuatrecasas, J., Romero Castañeda, R.; 24768; Holotype; 1959-10-10; Colombia; Magdalena; Sierra Nevada de Santa Marta, Hoya del Rio Donachui, Cancurua.<br> Elevation: 2400-2650 m<br> Verification: Original publication and alleged type specimen examined<br> US Sheet No.: 2325539<br> Barcode: 00128657<br> Specimen photographs: http://collections.mnh.si.edu/search/botany/search.php?action=10&irn=10076557&width=495&height=640<br> Copyright © Smithsonian Institution".
Figure 2 from: Diazgranados M, Funk V (2013) Utility of QR codes in biological collections. PhytoKeys 25: 21-34. https://doi.org/10.3897/phytokeys.25.5175
Figure 2 - QR code structure and tolerance. Left: QR code with the maximum level of error correction (H: 30% of tolerance to damage). Right: Structure of the same QR code: yellow: quiet zone; red: position; orange: alignment; blue: timing; green: format information; cyan: version; grey and white: data and error correction modules.<br> Encoded text (including returns):<br> "US National Herbarium<br> Montanoa josei V.A. Funk (Asteraceae)<br> US Sheet No.: 2325539 | Barcode: 00128657<br> Specimen photographs: http://collections.mnh.si.edu/search/botany/search.php?action=10&irn=10076557&width=495&height=640"
Figure 1 from: Diazgranados M, Funk V (2013) Utility of QR codes in biological collections. PhytoKeys 25: 21-34. https://doi.org/10.3897/phytokeys.25.5175
Figure 1 - Examples of potential uses of QR codes in Natural History collections. A "Ruilopezia cardonae (Cuatrec.) Cuatrec. (coll. M.Diazgranados & R.Sánchez 3257). Cited in: Diazgranados M (2012) A nomenclator for the frailejones (Espeletiinae Cuatrec., Asteraceae). PhytoKeys 16: 1–52 (http://www.pensoft.net/journals/phytokeys/article/3186/abstract/)" B "Genbank Accession JN837330: http://www.ncbi.nlm.nih.gov/nuccore/JN837330.1" C "Photographs of this collection: http://espeletia.org/galleries/main.php?g2_view=tagtree.VirtualAlbum&g2_tags%5B0%5D=815&g2_albumId=7" D "http://en.qrwp.org/Sunflower" E "Statistics of Fig. 1D: http://qrwp.org/stats.php?path=Sunflower" F "http://espeletia.org/". Readability of these QR codes was tested using an iPhone 4 with Qrafter and Quick Scan.
Figure 4 from: Nelson G, Paul D, Riccardi G, Mast A (2012) Five task clusters that enable efficient and effective digitization of biological collections. ZooKeys 209: 19-45. https://doi.org/10.3897/zookeys.209.3135
Figure 4 - Specimen image processing. Using Adobe Photoshop Lightroom software to process images. New York Botanical Garden.
Figure 3 from: Nelson G, Paul D, Riccardi G, Mast A (2012) Five task clusters that enable efficient and effective digitization of biological collections. ZooKeys 209: 19-45. https://doi.org/10.3897/zookeys.209.3135
Figure 3 - Custom specimen holder. Museum of Compartive Zoology (MCZ) Rhopalocera (Lepidoptera) Rapid Digitization Project.
Figure 2 from: Nelson G, Paul D, Riccardi G, Mast A (2012) Five task clusters that enable efficient and effective digitization of biological collections. ZooKeys 209: 19-45. https://doi.org/10.3897/zookeys.209.3135
Figure 2 - Specimen image capture. Fossil specimen imaging, specimen label imaging. Two very different imaging set-ups. Yale Peabody Museum, University of Kansas - Entomology.
Figure 1 from: Nelson G, Paul D, Riccardi G, Mast A (2012) Five task clusters that enable efficient and effective digitization of biological collections. ZooKeys 209: 19-45. https://doi.org/10.3897/zookeys.209.3135
Figure 1 - Pre-digitization specimen curation and staging. Preparing barcodes and imaging labels, affixing barcodes, updating taxonomy. L to R: University of Kansas – Entomology, New York Botanical Garden and Yale Peabody Museum.
Figure 5 from: Nelson G, Paul D, Riccardi G, Mast A (2012) Five task clusters that enable efficient and effective digitization of biological collections. ZooKeys 209: 19-45. https://doi.org/10.3897/zookeys.209.3135
Figure 5 - Electronic data capture. Entering data straight from the specimen label into the database. New York Botanical Garden.
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