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1,079 results for “source data”
Source data for the manuscript "Theory of branching morphogenesis by local interactions and global guidance"
<p>The zip file includes source data used in the main text of the manuscript "Theory of branching morphogenesis by local interactions and global guidance", as well as a representative Jupyter notebook to reproduce the main figures. A sample script for the simulations of branching and annihilating random walks is also included (Sample_script_for_simulations_of_BARWs.ipynb) to generate exemplary branched networks under external guidance. A detailed description of the simulation setup is provided in the supplementary information of the manuscipt.</p>
Plots source data for the Communications Earth & Environment research article titled: Diurnal expansion and contraction of englacial fracture networks revealed by seismic shear wave splitting
<p>The source data for plotting figures presented in the main text of article titled: Diurnal expansion and contraction of englacial fracture networks revealed by seismic shear wave splitting.</p>
Source data used to reproduce global maps for Ou et al. 2021 (Deep Mitigation of CO2 and non-CO2 Greenhouse Gases towards 1.5°C and 2°C Futures)
<p>Shape file and R code used to reproduce Fig 3d and SI figures with global maps, using an open-source R package "sf" (https://r-spatial.github.io/sf/ ) </p>
Source Data for the publication "From crystallographic data to solution structure of photoreceptors: the case of AppA BLUF domain"
<p>This dataset contains the raw data for the results shown in the paper, all in excel format, one sheet per file:</p> <ul> <li> <p>chemical_shifts.xlsx - Chemical shifts of FMN and residues (on optimized frames)</p> </li> <li> <p>excitation_energies.xlsx - Excitation energies of FMN (on optimized frames)</p> </li> <li> <p>Distance_H3.xlsx - Distance between ASN-OD1 and FMN-H3 (on optimized frames)</p> </li> <li> <p>CO_freq_QMMM_MD.xlsx - Average C=O frequencies and relevant distances for each QM/MM MD.</p> <p> </p> </li> </ul>
Source Data for Lawlor, Cao, and Ellison 2021
<p>Source Data for Lawlor, Cao, and Ellison 2021</p>
Data from: Nucleation of jet engine oil vapours is a large source of aviation-related ultrafine particles
<p>Data of Figures 1-3</p>
Source data - inner hair cells development
<p>This is the dataset used to produce the numerical figures in the publication "Precise alternating cellular pattern in the inner ear by coordinated hopping intercalations and delaminations"</p>
Coiled tubing contact analysis data and source code
<p>基于数字孪生的连续油管接触分析数据及源代码研究</p>
Source data for "Inhibitory top-down projections from zona incerta mediate neocortical memory"
<p>These files contain the data that are presented in the figures in the article: "Inhibitory top-down projections from zona incerta mediate neocortical memory".</p>
Source data for "Benchmarking commonly used software suites and analysis workflows for DIA proteomics and phosphoproteomics"
<p>Source data of "Benchmarking commonly used software suites and analysis workflows for DIA proteomics and phosphoproteomics".</p> <p>For reproduction of main and supplementary figures.</p> <p>MS raw files, spectral libraries, and MS data search results are stored in iProX with identifier IPX0004576001.</p> <p> </p>
Follow-up representative source data of metastatic colorectal cancer patients treated with TAS-102 and regorafenib
<p>Follow-up representative source data of metastatic colorectal cancer patients treated with TAS-102 and regorafenib (date of vital status and tomographic scans).</p>
Source data of Hyperexcited limbic neurons represent sexual satiety and reduce mating motivation
<p>The processed data of Hyperexcited limbic neurons represent sexual satiety and reduce mating motivation</p>
Source data of scMoMaT jointly performs single cell mosaic integration and multi-modal bio-marker detection
<p>The source data of the manuscript: scMoMaT jointly performs single cell mosaic integration and multi-modal bio-marker detection.</p>
Table S1. Clinical failure rates in drug development: data sources.
<p>Supplementary table comprising the data sources used in the manuscript “No Improvement in 60 Years: Drug Failure Rates from the 1960s to the 2010s”.</p>
Source data for "Design and construction of a microfluidics workstation for high-throughput multi-wavelength fluorescence and transmittance activated droplet analysis and sorting".
<p>Contains numeric data for figures 16-18 and supplementary fig 6 linked with the publication: Panwar, J., Autour, A. & Merten, C.A. Design and construction of a microfluidics workstation for high-throughput multi-wavelength fluorescence and transmittance activated droplet analysis and sorting. <em>Nat Protoc</em> (2023). <a href="https://doi.org/10.1038/s41596-022-00796-2">https://doi.org/10.1038/s41596-022-00796-2</a></p>
Detection of the Fire Drill anti-pattern: 15 real-world projects with ground truth, issue-tracking data, source code density, models and code
<p>This package contains artifacts for <strong>15</strong> real-world software projects. The data is supposed to aid the detection of the presence of the Fire Drill anti-pattern. We include original data, ground truth, code (experimental setups and models), and notebooks. The data supports two distinct methods of detecting the AP: a) through issue-tracking data, and b) through the underlying source code. This version of the dataset corresponds to <strong>v8</strong> of the <a href="https://arxiv.org/abs/2104.15090v8">technical report</a> and the <a href="https://github.com/MrShoenel/anti-pattern-models/releases/tag/arxiv-v8">GitHub repository</a>. The package includes the following:</p> <p>Original data:</p> <ul> <li>For each project, its <strong>original</strong> artifacts (e.g., wikis, meeting minutes, mentor's notes, etc.)</li> <li>Evaluation of raters' notes by the assessor</li> </ul> <p>Fire Drill in issue-tracking data:</p> <ul> <li><strong>Ground truth</strong> for whether and how strong each project exhibits the Fire Drill AP, on a scale from [0,10]. This was determined by two individual raters, who also reached a consensus.</li> <li>Coefficients for indicators for the first method, per project.</li> <li>Detailed issue-tracing data for each project: what occurred and when.</li> <li>Time logs for each project.</li> </ul> <p>Fire Drill in source-code data:</p> <ul> <li><strong>Four</strong> technical reports that document the developed method of how to translate a description into a detectable pattern, and to use the pattern to detect the presence and to score it (similar to the rating). Also includes a report for how activities were assigned to individual commits.</li> <li>Source code density data (metrics) for each commit in each of the nine projects as a separate dataset.</li> <li>Code: a snapshot of the repository that holds all code, models, notebooks, and pre-computed results, for utmost reproducibility (the code is written in R).</li> </ul>
Supporting data for the Eastern equatorial Pacific dust fertilization and source weathering influences on the Eocene to Miocene CO2 decline
<p>This is supporting data for Equatorial Pacific dust fertilization and source weathering influences on Eocene to Miocene global CO<sub>2 </sub>decline.</p>
Source data of Safety Assessment by Differential Prefrontal Circuits Mediates Flexibility in Fear Reactions
<p>The processed data of <strong>Safety Assessment by Differential Prefrontal Circuits Mediates Flexibility in Fear Reactions</strong></p>
Data to reproduce the results presented in Lake et al. 2023. Science of The Total Environment, https://doi.org/10.1016/j.scitotenv.2023.162332 ("Use of a submersible spectrophotometer probe to fingerprint spatial suspended sediment sources at catchment scale")
<p>This repository contains the absorbance data measured on the water samples collected in all sampling sites, for the three campaigns, as described in Lake et al., 2023. </p> <p>Data consists of:</p> <p>- Absorbance data compensated for measured concentration and compensated for absorbance measured on filtered water </p> <p>- Absorbance data compensated for measured concentration</p> <p>Shown files are the input files for the MixSIAR modelling exercise as described in Lake et al., 2023.</p>
Source Data for "Shape control in 2D molecular nanosheets by tuning anisotropic intermolecular interactions and assembly kinetics"
<p>This folder contains source data for figures of the paper "Shape control in 2D molecular nanosheets by tuning intermolecular interactions and assembly kinetics" (https://doi.org/10.1038/s41467-023-37203-7).</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.